WDR88 91

Name: WDR88	Sequence: fasta or formatted (472aa)		NCBI GI: 102470001
Description: PQQ repeat and WD repeat domain containing		Referenced in: WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 26 2 C cysteine 4.7 22 2 D aspartate 8.1 38 2 E glutamate 4.2 20 2 F phenylalanine 4.0 19 1 G glycine 5.1 24 2 H histidine 3.8 18 2 I isoleucine 5.7 27 1 K lysine 6.8 32 2 L leucine 7.4 35 2 M methionine 1.5 7 1 N asparagine 2.3 11 2 P proline 5.9 28 3 Q glutamine 1.5 7 1 R arginine 5.3 25 1 S serine 11.4 54 7 T threonine 6.1 29 2 V valine 6.6 31 2 W tryptophan 2.5 12 1 Y tyrosine 1.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PQQ repeat and WD repeat domain containing WDR69 0.124 WD repeat domain 69 WDR5 0.102 WD repeat domain 5 WDR5 0.102 WD repeat domain 5 WDR38 0.100 WD repeat domain 38 FBXW7 0.098 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.098 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.098 F-box and WD repeat domain containing 7 isoform 2 [H... SNRNP40 0.097 WD repeat domain 57 (U5 snRNP specific) WDR5B 0.097 WD repeat domain 5B WDR51A 0.090 WD repeat domain 51A isoform 3 PAFAH1B1 0.079 platelet-activating factor acetylhydrolase, isoform I... APAF1 0.078 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.078 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.078 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.078 apoptotic peptidase activating factor 1 isoform a [Ho... SPAG16 0.076 sperm associated antigen 16 isoform 1 TAF5 0.073 TBP-associated factor 5 FBXW11 0.071 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.071 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.071 F-box and WD repeat domain containing 11 isoform B [... WDR51A 0.069 WD repeat domain 51A isoform 2 WDR51A 0.069 WD repeat domain 51A isoform 1 BTRC 0.069 beta-transducin repeat containing protein isoform 2 [... BTRC 0.069 beta-transducin repeat containing protein isoform 1 ... TBL1Y 0.068 transducin beta-like 1Y TBL1Y 0.068 transducin beta-like 1Y TBL1Y 0.068 transducin beta-like 1Y WDR51B 0.068 WD repeat domain 51B GNB2L1 0.067 guanine nucleotide binding protein (G protein), beta ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.