Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 109715849
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109715849 chromosome 6 open reading frame 204 isoform b
[Homo sapiens]
(496 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109715849 chromosome 6 open reading frame 204 isoform b [Homo... 997 0.0
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 964 0.0
gi|40538794 coiled-coil domain containing 21 [Homo sapiens] 136 5e-32
gi|96975038 coiled-coil domain containing 100 [Homo sapiens] 42 0.002
gi|55770834 centromere protein F [Homo sapiens] 40 0.006
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 39 0.008
gi|187761324 shootin1 isoform a [Homo sapiens] 36 0.071
gi|50511340 shootin1 isoform b [Homo sapiens] 36 0.071
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 36 0.092
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 35 0.12
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 35 0.12
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 35 0.12
gi|112382257 InaD-like [Homo sapiens] 35 0.12
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 35 0.16
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 35 0.21
gi|16262452 cingulin [Homo sapiens] 34 0.27
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 34 0.27
gi|100913218 transmembrane protein 123 precursor [Homo sapiens] 34 0.27
gi|67782356 corneodesmosin precursor [Homo sapiens] 33 0.46
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [... 33 0.46
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens] 33 0.60
gi|191252812 target of myb1-like 1 [Homo sapiens] 33 0.60
gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens] 33 0.60
gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens] 33 0.60
gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens] 33 0.60
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 33 0.60
gi|41349474 PR domain containing 4 [Homo sapiens] 33 0.60
gi|187608767 E74-like factor 4 [Homo sapiens] 33 0.78
gi|4503555 E74-like factor 4 [Homo sapiens] 33 0.78
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 33 0.78
>gi|109715849 chromosome 6 open reading frame 204 isoform b [Homo
sapiens]
Length = 496
Score = 997 bits (2577), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Query: 1 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA 60
MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA
Sbjct: 1 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA 60
Query: 61 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP 120
SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP
Sbjct: 61 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP 120
Query: 121 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR 180
DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR
Sbjct: 121 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR 180
Query: 181 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF 240
NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF
Sbjct: 181 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF 240
Query: 241 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL 300
RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL
Sbjct: 241 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL 300
Query: 301 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW 360
TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW
Sbjct: 301 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW 360
Query: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP 420
ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP
Sbjct: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP 420
Query: 421 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV 480
QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV
Sbjct: 421 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV 480
Query: 481 GFSNKVELGQQHFLSI 496
GFSNKVELGQQHFLSI
Sbjct: 481 GFSNKVELGQQHFLSI 496
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 964 bits (2492), Expect = 0.0
Identities = 479/480 (99%), Positives = 480/480 (100%)
Query: 1 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA 60
MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA
Sbjct: 1 MWGRFLAPEASGRDSPGGARSFPAGPDYSSAWLPANESLWQATTVPSNHRNNHIRRHSIA 60
Query: 61 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP 120
SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP
Sbjct: 61 SDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTP 120
Query: 121 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR 180
DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR
Sbjct: 121 DGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKLTAPDNCGQGGTVCREESR 180
Query: 181 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF 240
NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF
Sbjct: 181 NGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFESCSKEDF 240
Query: 241 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL 300
RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL
Sbjct: 241 RASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWL 300
Query: 301 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW 360
TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW
Sbjct: 301 TEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKW 360
Query: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP 420
ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP
Sbjct: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP 420
Query: 421 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV 480
QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK+
Sbjct: 421 QYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKL 480
>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
Length = 762
Score = 136 bits (342), Expect = 5e-32
Identities = 137/460 (29%), Positives = 214/460 (46%), Gaps = 63/460 (13%)
Query: 40 WQATTVPSNHRNNHIRRHSIASDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPT 99
WQ + R+ R S+A DSGDT IGTSCSD ED +SSG+ F+P +S +T+PT
Sbjct: 33 WQTPVISEPFRSRFSRCSSVA-DSGDTAIGTSCSDIAEDFCSSSGSPPFQPIKSHVTIPT 91
Query: 100 AHVMPSNSSASISKLRES-LTPDGSKWSTS-LMQTLGNHSRGEQDSSLDMKDFRPLRKWS 157
AHVMPS S +K + + P SK S L +++G G D ++
Sbjct: 92 AHVMPSTLGTSPAKPNSTPVGPSSSKLPLSGLAESVGMTRNG---------DLGAMKHSP 142
Query: 158 SLSKLTAPDNCGQGGTVCREESRNGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLED-- 215
LS+ + G NG+E+ + P+ H+ E R D
Sbjct: 143 GLSRDLMYFSGATG--------ENGIEQ------------SWFPAVGHERQEEARKFDIP 182
Query: 216 -KEINKKRSSTLDCKYKFESCSKEDFRASSSTLRRQPVDMTYSALPESKPIMTSSEAFE- 273
E +S+ ++ Y S R R Y LPE+K S FE
Sbjct: 183 SMESTLNQSAMMETLY-----SDPHHRVRFHNPRTSTSKELYRVLPEAKKAPGSGAVFER 237
Query: 274 ------PPKYLMLGQQAVGGVPIQPSVRTQMWLTEQLRTNPLEGRNTEDSYSLAPWQQQQ 327
L LG Q G + + +Q+W + +P E S L+ +QQ
Sbjct: 238 NGPHSNSSGVLPLGLQPAPG--LSKPLPSQVW-----QPSPDTWHPREQSCELSTCRQQ- 289
Query: 328 IEDFRQGSETPMQVLTGS---SRQSYSPGYQ--DFSKWESMLKIKEGLLRQKEIVIDRQK 382
+E R E MQ+ G+ ++ P + ++W S+L E LL++KE++ID+Q+
Sbjct: 290 LELIRLQMEQ-MQLQNGAICHHPAAFGPSLPILEPAQWISILNSNEHLLKEKELLIDKQR 348
Query: 383 QQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQP-QYENTSLQTPFSEESVSHSQQ 441
+ I+ L +++R++EL+ A+LG D + LQ Q ENT L+ F++++ + S++
Sbjct: 349 KHISQLEQKVRESELQVHSALLGRPAPFGDVCLLRLQELQRENTFLRAQFAQKTEALSRE 408
Query: 442 G-EFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV 480
+ E+KL+++E EV + E LK L SEE KK EE+V
Sbjct: 409 KIDLEKKLSASEVEVQLIRESLKVALQKHSEEVKKQEERV 448
>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
Length = 986
Score = 41.6 bits (96), Expect = 0.002
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 27/278 (9%)
Query: 233 ESCSKEDFRASSSTLRRQP-----VDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGG 287
E C ++ + S + Q D++Y+ E ++ E F + Q V
Sbjct: 570 EQCWRQTYSESVPVIAAQGSNNRIADLSYTVTLEDYGLVKMREIF-----ISDSSQGVSA 624
Query: 288 VPIQPSVRTQMWLTEQLRTNPLEGRNTEDSYSLAPWQQQQIEDF----RQGSETPMQVLT 343
V +PS +++T P E + + L W++ Q + F +Q MQ L
Sbjct: 625 VQQKPSSLPPAPCPSEIQTEPRETLEYKAALELEMWKEMQEDIFENQLKQKELAHMQALA 684
Query: 344 GSSRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAM 403
++ K + I EG L++ I +++++QQ+ + ++ + Q
Sbjct: 685 EEWKKRDRERESLVKKKVAEYTILEGKLQKTLIDLEKREQQLASVESELQREKKELQSER 744
Query: 404 LGHYVNCEDSYVASLQP---QYENTSLQTPFSEESVSHSQQ--GEFEQKLASTEKEVLQL 458
+ +DS + + Q E L+ EE QQ + E K EKE Q
Sbjct: 745 QRNLQELQDSIRRAKEDCIHQVELERLKIKQLEEDKHRLQQQLNDAENKYKILEKEFQQF 804
Query: 459 NE--------FLKQRLSLFSEEKKKLEEKVGFSNKVEL 488
+ L+ ++L + EK +LE K+ + K +L
Sbjct: 805 KDQQNNKPEIRLQSEINLLTLEKVELERKLESATKSKL 842
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 39.7 bits (91), Expect = 0.006
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCE-DSYVASLQ 419
E+ +K K LL+ + + THL E+++ E +Q L CE ++ +A L
Sbjct: 2006 EAEVKEKTELLQTLSSDVSELLKDKTHLQEKLQSLEKDSQALSL---TKCELENQIAQLN 2062
Query: 420 PQYE-----NTSLQTPFSEE-----SVSHS------QQGEFEQKLASTEKEVLQLNEFL- 462
+ E + SLQ SE +VS + ++GEF +L+ST++EV QL +
Sbjct: 2063 KEKELLVKESESLQARLSESDYEKLNVSKALEAALVEKGEFALRLSSTQEEVHQLRRGIE 2122
Query: 463 KQRLSLFSEEKKKL 476
K R+ + ++EKK+L
Sbjct: 2123 KLRVRIEADEKKQL 2136
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 39.3 bits (90), Expect = 0.008
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 323 WQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKWESM--LKIKEGLLRQKEIVIDR 380
W+Q+ E R+ E + Q G Q+ WE ++ +E +R++E I
Sbjct: 386 WRQE--EKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIRE 443
Query: 381 QKQQITHLHERIRDNE--LRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSH 438
Q+++I E+IR+ E ++ Q +G A +Q Q E Q
Sbjct: 444 QEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQ---------- 493
Query: 439 SQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
E+K+ EK++ + E ++++ + E+++K+ E+
Sbjct: 494 ------EEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQ 528
Score = 37.0 bits (84), Expect = 0.041
Identities = 59/282 (20%), Positives = 115/282 (40%), Gaps = 33/282 (11%)
Query: 207 SMEMLR--LEDKEINKKRSSTLDCKYKFESCSKEDFRASSSTLRRQPVDMTYSALPESKP 264
S+E+ R + D+E+ K++++ L K + K + + + L+R+ L +K
Sbjct: 194 SLELYRNTITDEEL-KEKNAKLQEKLQLVESEKSEIQLNVKELKRK--------LERAKL 244
Query: 265 IMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWLTEQLRTNPLEGRNTEDSYSLAPWQ 324
++ + +L Q+V S + Q + E N L + E W+
Sbjct: 245 LLPQQQLQAEADHLGKELQSV-------SAKLQAQVEENELWNRLNQQQEEKM-----WR 292
Query: 325 QQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIK--EGLLRQKEIVIDRQK 382
Q+ E ++ E + Q Q+ WE K++ E ++ +KE I R+
Sbjct: 293 QE--EKIQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKI-REL 349
Query: 383 QQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQ- 441
++ H E+IR+ E + Q A + Q E Q E Q+
Sbjct: 350 EEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQ 409
Query: 442 ----GEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
GE E+K+ E+E+ + E ++++ E++KK+ E+
Sbjct: 410 EEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQ 451
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 36.2 bits (82), Expect = 0.071
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 362 SMLKIKEGLLRQKEIVID---RQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASL 418
SML ++E Q + ++ R+K + I N+L+ Q +L + + +L
Sbjct: 207 SMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKAL 266
Query: 419 QPQYENTSLQTPFSEESVSHSQQ-GEFEQKLASTEKEVLQLN-EFLKQRLSLFSEEKKKL 476
EN L EE + H Q+ E E++L E E L LKQ+L L E+KK+L
Sbjct: 267 D---ENAKLTQQLEEERIQHQQKVKELEEQL---ENETLHKEIHNLKQQLELLEEDKKEL 320
Query: 477 EEKVGFSNKVELGQQH 492
E K S + +H
Sbjct: 321 ELKYQNSEEKARNLKH 336
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.071
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 362 SMLKIKEGLLRQKEIVID---RQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASL 418
SML ++E Q + ++ R+K + I N+L+ Q +L + + +L
Sbjct: 207 SMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKAL 266
Query: 419 QPQYENTSLQTPFSEESVSHSQQ-GEFEQKLASTEKEVLQLN-EFLKQRLSLFSEEKKKL 476
EN L EE + H Q+ E E++L E E L LKQ+L L E+KK+L
Sbjct: 267 D---ENAKLTQQLEEERIQHQQKVKELEEQL---ENETLHKEIHNLKQQLELLEEDKKEL 320
Query: 477 EEKVGFSNKVELGQQH 492
E K S + +H
Sbjct: 321 ELKYQNSEEKARNLKH 336
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 35.8 bits (81), Expect = 0.092
Identities = 27/133 (20%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 355 QDFSKWESMLKIKEGLLRQKEIV------IDRQKQQITHLHERIRDNE--LRAQHAMLGH 406
++ + E ++ +E + RQKE + I +Q++++ E++ D E +R Q +
Sbjct: 523 EEMWRQEEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWR 582
Query: 407 YVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRL 466
++ Q E Q ++E + GE E+K+ E+++ + E ++++
Sbjct: 583 QEEKIREQEEKIREQEEKIREQEEMTQEQ--EEKMGEQEEKMCEQEEKMQEQEEKMRRQE 640
Query: 467 SLFSEEKKKLEEK 479
E++KK+ E+
Sbjct: 641 EKIREQEKKIREQ 653
Score = 35.4 bits (80), Expect = 0.12
Identities = 30/158 (18%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Query: 324 QQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVIDRQKQ 383
+Q+Q E +RQ + Q ++ + K E + +E + +E I Q++
Sbjct: 519 RQEQEEMWRQEEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEE 578
Query: 384 QITHLHERIRDNE--LRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQ 441
++ E+IR+ E +R Q + + Q E Q +E +
Sbjct: 579 KVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQE--QEEKM 636
Query: 442 GEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
E+K+ EK++ + E ++++ + E+++K+ E+
Sbjct: 637 RRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQ 674
Score = 32.0 bits (71), Expect = 1.3
Identities = 53/281 (18%), Positives = 112/281 (39%), Gaps = 37/281 (13%)
Query: 207 SMEMLR--LEDKEINKKRSSTLDCKYKFESCSKEDFRASSSTLRRQPVDMTYSALPESKP 264
S+E+ R + D+E+ K++++ L K + K + + + L+R+ L +K
Sbjct: 267 SLELYRNTITDEEL-KEKNAKLQEKLQLVESEKSEIQLNVKELKRK--------LERAKL 317
Query: 265 IMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWLTEQLRTNPLEGRNTEDSYSLAPWQ 324
++ + +L Q+V S + Q + E N L + E +
Sbjct: 318 LLPQQQLQAEADHLGKELQSV-------SAKLQAQVEENELWNRLNQQQEEKMWRQEEKI 370
Query: 325 QQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIK--EGLLRQKEIVIDRQK 382
Q+ E ++ E + Q Q+ WE K++ E ++ +KE + RQ+
Sbjct: 371 QEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQE 430
Query: 383 QQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQG 442
+ + E+IR+ E + ++ Q E + E+ Q+
Sbjct: 431 EMMWEKEEKIRELEEKMHEQ-------------EKIREQEEKRQEEEKIREQEKRQEQEA 477
Query: 443 EF---EQKLASTEKEVLQLNEFL-KQRLSLFSEEKKKLEEK 479
+ E+K+ E+++ + E + +Q + +EK + EEK
Sbjct: 478 KMWRQEEKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEK 518
Score = 29.3 bits (64), Expect = 8.6
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 355 QDFSKW--ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNE--LRAQHAM------- 403
Q+ W E + +E +R++E + RQ+++I E+IR+ E +R Q M
Sbjct: 555 QEEKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEK 614
Query: 404 LGHYVNCEDSYVASLQPQYENTSLQTPF----------SEESVSHSQQ--GEFEQKLAST 451
+G +Q Q E Q EE + ++ E E+K+
Sbjct: 615 MGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQ 674
Query: 452 EKEVLQLNEFLK-QRLSLFSEEKKKLEEKVGFSNKVELGQQH 492
E+++ + E ++ Q + +E+K E++V + E Q+H
Sbjct: 675 EEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQEH 716
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 35.4 bits (80), Expect = 0.12
Identities = 30/159 (18%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 323 WQQQQIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVIDRQK 382
W+Q+ E R+ E Q ++ + + E + +E +R++E + RQ+
Sbjct: 465 WRQE--EKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQE 522
Query: 383 QQITHLHERIRDNE--LRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQ 440
++I E+IR+ E +R Q M+ +Q Q + + E+ +
Sbjct: 523 EKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIRE 582
Query: 441 QGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
Q ++K+ E+++ + E ++++ + E+++K+ E+
Sbjct: 583 Q---KEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQ 618
Score = 31.2 bits (69), Expect = 2.3
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 39/286 (13%)
Query: 207 SMEMLR--LEDKEINKKRSSTLDCKYKFESCSKEDFRASSSTLRRQPVDMTYSALPESKP 264
S+E+ R + D+E+ K++++ L K + K + + + L+R+ L +K
Sbjct: 206 SLELYRNTITDEEL-KEKNAKLQEKLQLVESEKSEIQLNVKELKRK--------LERAKL 256
Query: 265 IMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWLTEQLRTNPLEGRNTEDSY----SL 320
++ + +L Q+V S + Q + E N L + E + +
Sbjct: 257 LLPQQQLQAEADHLGKELQSV-------SAKLQAQVEENELWNRLNQQQEEKMWRQEEKI 309
Query: 321 APWQ---QQQIEDFRQGSETPMQVLTGSSRQSYSPGYQD--FSKWESMLKIKEGLLRQKE 375
W+ Q+Q E R+ E + RQ ++ + E M+ KE +R+ E
Sbjct: 310 QEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRLE 369
Query: 376 IVIDRQKQQITHLHERIRDNE-LRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEE 434
++ ++++I L E++ + E +R Q E+ + + + E + EE
Sbjct: 370 EMMWEKEEKIRELEEKMHEQEKIREQEEK-----RQEEEKIREQEKRQEQEAKMWR-QEE 423
Query: 435 SVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKV 480
+ E E+K+ EK++ + E + ++ + EEK++ +E++
Sbjct: 424 KIR-----EQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEM 464
Score = 29.3 bits (64), Expect = 8.6
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNE-LRAQHAMLGHYVNCEDSYVASLQ 419
E ++ +E +R++E ++ Q++++ E++++ E +R Q + ++
Sbjct: 529 EEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKEKIR 588
Query: 420 PQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
Q E Q E Q+ E E+ EK Q + +Q + +E+K E++
Sbjct: 589 EQEEKIWEQEEKIREQEEMMQEQE-EKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQE 647
Query: 480 VGFSNKVELGQQH 492
V + E Q+H
Sbjct: 648 VRLRQQEEKMQEH 660
>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
Length = 1123
Score = 35.4 bits (80), Expect = 0.12
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 33/167 (19%)
Query: 334 GSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVI---DRQKQQITHLHE 390
GS +P++ L G+ S P ++ + +L +K+ QK+++ +Q +T HE
Sbjct: 53 GSPSPVE-LRGALVGSVDPTLREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHE 111
Query: 391 RIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLAS 450
L+ Q ML A+ Q Q E ++ +Q E EQ+
Sbjct: 112 VQLQKHLKQQQEML-----------AAKQQQ------------EMLAAKRQQELEQQ--- 145
Query: 451 TEKEVLQLNEFLKQRLS---LFSEEKKKLEEKVGFSNKVELGQQHFL 494
++E + E KQRL L K+K +E S +V+L Q FL
Sbjct: 146 RQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFL 192
>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
Length = 1122
Score = 35.4 bits (80), Expect = 0.12
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 33/167 (19%)
Query: 334 GSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVI---DRQKQQITHLHE 390
GS +P++ L G+ S P ++ + +L +K+ QK+++ +Q +T HE
Sbjct: 52 GSPSPVE-LRGALVGSVDPTLREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHE 110
Query: 391 RIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLAS 450
L+ Q ML A+ Q Q E ++ +Q E EQ+
Sbjct: 111 VQLQKHLKQQQEML-----------AAKQQQ------------EMLAAKRQQELEQQ--- 144
Query: 451 TEKEVLQLNEFLKQRLS---LFSEEKKKLEEKVGFSNKVELGQQHFL 494
++E + E KQRL L K+K +E S +V+L Q FL
Sbjct: 145 RQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFL 191
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 35.4 bits (80), Expect = 0.12
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 374 KEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASL----QPQYENTSLQT 429
K +V D +++ LH NE + + + H +N A +P ++ +
Sbjct: 771 KPLVEDNEEESCYILHSS--SNEDKTEFSGTIHDINSSLILEAPKGFRDEPYFKEELVDE 828
Query: 430 PFSEESVS-HSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
PF + S HSQQ E EQ KE +++EFL RL EE++ L ++
Sbjct: 829 PFLDLGKSFHSQQKEIEQS-----KEAWEMHEFLTPRLQEMDEEREMLVDE 874
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 35.0 bits (79), Expect = 0.16
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 359 KWESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNELRAQHAM--------LGHYV-N 409
K + ++ EGLLRQ I ++ ++ +T L E+ ++N+LRAQ M L H++ +
Sbjct: 1254 KMQVAVQAAEGLLRQGNIYGEQAQEAVTRLLEKNQENQLRAQQWMQKLHDQLELQHFLRD 1313
Query: 410 C--------EDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEF 461
C E +A + +N L + ++ + ++ L E+E QL
Sbjct: 1314 CHELDGWIHEKMLMARDGTREDNHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQL--- 1370
Query: 462 LKQRLSLFSEEKKKLEE 478
++++ L + +KKL E
Sbjct: 1371 MQEKPELAASVRKKLGE 1387
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 34.7 bits (78), Expect = 0.21
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 51 NNHIRRHSIASDSGDTGIGTSCSDSVEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSAS 110
N I S +S S + +S S S S+SS + S S S + T+ P
Sbjct: 143 NRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKL--- 199
Query: 111 ISKLRESLTPDGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKWSSLSKL 162
+ + +E + D + ++ + +H++ ++SS K+ +PL++ + K+
Sbjct: 200 MKEHKEKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEKIVPKM 251
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 34.3 bits (77), Expect = 0.27
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 327 QIEDFRQGSETPMQVLTGSSRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVIDRQKQQIT 386
Q ED R G ET + L + P + +L+ +E L E V++ +++
Sbjct: 433 QGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELL----EEVLEGKQRVEE 488
Query: 387 HLHERIRDNELRAQHAMLGHYVNCEDSYVASLQPQYE------NTSLQTPFSEESVSHSQ 440
L R+R+ EL A L V D V ++ QY+ S+Q + +V ++
Sbjct: 489 QL--RLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAE 546
Query: 441 QGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKL 476
+ + + ++E+ + +E S+F + K+ L
Sbjct: 547 RQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDL 582
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 34.3 bits (77), Expect = 0.27
Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 234 SCSKEDFRASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPS 293
+C K + + L Q V+ ++SA E + S + + L Q+ +Q S
Sbjct: 1117 TCYKAKIKELETILETQKVECSHSAKLEQDILEKESIILKLERNLKEFQEH-----LQDS 1171
Query: 294 VRTQMWLTEQLRTNPLEGR--------NTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGS 345
V+ T+ L L+ + N +D L ++++ E RQ +E + L+ S
Sbjct: 1172 VKN----TKDLNVKELKLKEEITQLTNNLQDMKHLLQLKEEEEETNRQETEKLKEELSAS 1227
Query: 346 SRQSYSPGYQDFSKWESMLKIKEGLLRQKEIVIDRQKQQITHLHE----RIRDNELRAQH 401
S ++ + K E +KE L K+ + QK+ E RI+ NEL +
Sbjct: 1228 SARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQVQKEVSVMRDEDKLLRIKINELEKKK 1287
Query: 402 AMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEF 461
++ + + L+ Q N + EE++ QQ E K + ++++++
Sbjct: 1288 NQCSQELDMKQRTIQQLKEQLNNQKV-----EEAI---QQYERACKDLNVKEKIIE---- 1335
Query: 462 LKQRLSLFSEEKKKLEEKVGFSNKVE 487
R++L +E+ ++E+ K+E
Sbjct: 1336 -DMRMTLEEQEQTQVEQDQVLEAKLE 1360
>gi|100913218 transmembrane protein 123 precursor [Homo sapiens]
Length = 208
Score = 34.3 bits (77), Expect = 0.27
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 24 AGPDYSSAWLPANESLWQATT---VPSNHRNNHIRRH-----SIASDSGDTGIGTSCSDS 75
A + ++ LP N S T VPS+H N S+ASDS +T + T+ +
Sbjct: 34 ASANIENSGLPHNSSANSTETLQHVPSDHTNETSNSTVKPPTSVASDSSNTTV-TTMKPT 92
Query: 76 VEDHSTSSGTLSFKPSQSLI--TLPTAHVMPSNSSASISKLRESLTPDGSKWSTSLMQTL 133
++T+ G +S + + + T T V + S S S + + + ++S+ T
Sbjct: 93 AASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTITT 152
Query: 134 GNHSRGEQDSSLDMKDF 150
HS ++ S D F
Sbjct: 153 TMHSEAKKGSKFDTGSF 169
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 33.5 bits (75), Expect = 0.46
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 17/129 (13%)
Query: 17 GGARSFPAGPDYSS-AWLPANESLWQATTVPSNHRNNHIRRHSIASDSGDTGIGTSCSDS 75
G A SF G YS ++ + S Q + S + S S +G S S S
Sbjct: 101 GSAGSFKPGTGYSQVSYSSGSGSSLQGASGSSQ----------LGSSSSHSGSSGSHSGS 150
Query: 76 VEDHSTSSGTLSFKPSQSLITLPTAHVMPSNSSASISKLRESLTPDGSKWSTSLMQTLGN 135
HS+S + SF+ S S + +P+N ++ R L P S+S QT G
Sbjct: 151 SSSHSSS--SSSFQFSSSSFQVGNGSALPTNDNS----YRGILNPSQPGQSSSSSQTFGV 204
Query: 136 HSRGEQDSS 144
S G+ SS
Sbjct: 205 SSSGQSVSS 213
>gi|50658071 phosphodiesterase 4D interacting protein isoform 5
[Homo sapiens]
Length = 1132
Score = 33.5 bits (75), Expect = 0.46
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 410 CEDSYVASLQPQYEN-------TSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFL 462
CED +QP E S +T +++SVS S E ++K+ TE N+ L
Sbjct: 366 CEDYLPLRVQPMTEELLKQQKLNSHETTITQQSVSDSHLAELQEKIQQTE----ATNKIL 421
Query: 463 KQRLSLFSEEKKKLEE 478
+++L+ S E K +E
Sbjct: 422 QEKLNEMSYELKCAQE 437
>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 523
Score = 33.1 bits (74), Expect = 0.60
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 361 ESMLKIKEGLLRQKEIVIDRQKQQITHLHERIRDNE--LRAQHAMLGHYVNCEDSYVASL 418
E L+ +E LR++E + Q++++ ER+R+ E LR Q L + L
Sbjct: 198 EERLREQEERLREQEERLREQEERLCEQEERLREQEERLREQEERLCEQEERLREHEERL 257
Query: 419 QPQYENTSLQTP--FSEESVSHSQQG---EFEQKLASTEKEVLQLNEFLKQRLSLFSEEK 473
Q E Q +E H Q+ E E++L E+ + + E L+++ E++
Sbjct: 258 CEQEERLCEQEERLREQEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLCEQE 317
Query: 474 KKLEEK 479
++L E+
Sbjct: 318 ERLREQ 323
>gi|191252812 target of myb1-like 1 [Homo sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 0.60
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 204 LHDSMEMLRLEDKEIN---KKRSSTLDCKYKFESCSKEDFRA-----SSSTLRRQPVDMT 255
LH M +L LE+ EI ++ S L + +++ + S T+ P + +
Sbjct: 361 LHPQMNLLALENTEIPPFAQRTSQNLTSSHAYDNFLEHSNSVFLQPVSLQTIAAAPSNQS 420
Query: 256 YSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQ 297
LP + P MT S+ +PP Y + + P+ P+V T+
Sbjct: 421 LPPLPSNHPAMTKSD-LQPPNY----YEVMEFDPLAPAVTTE 457
>gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.1 bits (74), Expect = 0.60
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 391 RIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLAS 450
RI++NELRA L N + Y L+ Q+E + + + + S + +++L +
Sbjct: 689 RIKENELRALEEELAGLKNTAEKY-RQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDA 747
Query: 451 TEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
+K + + E LK E ++K EEK
Sbjct: 748 LKKTIEESEETLKNT----KEIQRKAEEK 772
>gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.1 bits (74), Expect = 0.60
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 391 RIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLAS 450
RI++NELRA L N + Y L+ Q+E + + + + S + +++L +
Sbjct: 689 RIKENELRALEEELAGLKNTAEKY-RQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDA 747
Query: 451 TEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
+K + + E LK E ++K EEK
Sbjct: 748 LKKTIEESEETLKNT----KEIQRKAEEK 772
>gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.1 bits (74), Expect = 0.60
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 391 RIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLAS 450
RI++NELRA L N + Y L+ Q+E + + + + S + +++L +
Sbjct: 689 RIKENELRALEEELAGLKNTAEKY-RQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDA 747
Query: 451 TEKEVLQLNEFLKQRLSLFSEEKKKLEEK 479
+K + + E LK E ++K EEK
Sbjct: 748 LKKTIEESEETLKNT----KEIQRKAEEK 772
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 33.1 bits (74), Expect = 0.60
Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 38/325 (11%)
Query: 178 ESRNGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDKEINKKRSSTLDCKYKFES--C 235
E+ N K+ A TSQ + I L + +LE E+ KK S L + + E
Sbjct: 654 EAENSDLKVNMAHR-TSQFQLIQEELLEKASNSSKLES-EMTKKCSQLLTLEKQLEEKIV 711
Query: 236 SKEDFRASSSTLRRQPVDMTYSALPESKPIMTSSE----AFEPPKYLMLGQQAVGGVPIQ 291
+ A ++ L ++ ++ I T E AFE K + L Q I+
Sbjct: 712 AYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICLAFEKAKKIHLEQHKEMEKQIE 771
Query: 292 PSVRTQMWLTEQLRTNPLEGRNTEDSYSLAPWQQQQIEDFRQGSETPMQVLTGSSRQSYS 351
L QL + + E + S+ QQ I + E+ ++LT S +
Sbjct: 772 R-------LEAQLEKKDQQFKEQEKTMSML---QQDIICKQHHLESLDRLLTESKGEMKK 821
Query: 352 PGYQDFSKWESMLKIKEGL------LRQKEIVIDRQKQQIT-HLHERIRDNE-LRAQHAM 403
++ K E++ ++ + +RQ + ++ K+++ HL++ + E Q
Sbjct: 822 ---ENMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKK 878
Query: 404 LGHYVNCEDSYVASLQPQYENTSLQTPFSEESVSHSQQ---------GEFEQKLASTEKE 454
V C + + TS Q + ++ QQ GE E EK+
Sbjct: 879 KSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQ 938
Query: 455 VLQLNEFLKQRLSLFSEEKKKLEEK 479
V +L + L+++ +E+ +K+EEK
Sbjct: 939 VSKLEQELQKQRESSAEKLRKMEEK 963
Score = 32.7 bits (73), Expect = 0.78
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 371 LRQKEIVIDRQKQQITHLHERIRDNELRAQHAMLGHYVNCEDSYVASLQPQYENTSLQTP 430
LR+KE ++ + +Q+I+ L + I + R + + + ++ Y+A+ + + +
Sbjct: 1199 LREKEFIMLQNEQEISQLKKEIERTQQRMKE--MESVMKEQEQYIATQYKEAIDLGQELR 1256
Query: 431 FSEESV--SHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEK---KKLEEKVGFS 483
+ E V SH++ E + ++E+ +L+ L+ L E+ L E++G S
Sbjct: 1257 LTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGAS 1314
>gi|41349474 PR domain containing 4 [Homo sapiens]
Length = 801
Score = 33.1 bits (74), Expect = 0.60
Identities = 39/189 (20%), Positives = 79/189 (41%), Gaps = 22/189 (11%)
Query: 53 HIRRHSIASDSGDTGIGTSCSDSVEDHSTSSGTLSFKP------SQSLITLPTAHVMPSN 106
+I +SI D G+T + + + S D S+G + +P S+S+ T + PS+
Sbjct: 124 YIHPNSINVD-GNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHPSD 182
Query: 107 ----------SSASISKLRESLTPDGSKWSTSLMQTLGNHSRGEQDSSLDMKDFRPLRKW 156
+ ++S++ ++ DG ++ G HS+ S + PL
Sbjct: 183 GHEVALDTAITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGS----RSHEPLSV- 237
Query: 157 SSLSKLTAPDNCGQGGTVCREESRNGLEKIGKAKALTSQLRTIGPSCLHDSMEMLRLEDK 216
S+S A D G GG + + L + + + S++ + S L DS+ + +
Sbjct: 238 DSVSNNLAADAVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTN 297
Query: 217 EINKKRSST 225
++ S++
Sbjct: 298 SVSVALSTS 306
>gi|187608767 E74-like factor 4 [Homo sapiens]
Length = 663
Score = 32.7 bits (73), Expect = 0.78
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 242 ASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWLT 301
AS+ST RR ++ + P+ K S ++E PK +G Q + + PS+ ++ T
Sbjct: 322 ASASTTRRTSSRVSSRSAPQGK----GSSSWEKPKIQHVGLQPSASLELGPSLDEEIPTT 377
Query: 302 EQLRTNPLEGR 312
+ +P EG+
Sbjct: 378 STMLVSPAEGQ 388
>gi|4503555 E74-like factor 4 [Homo sapiens]
Length = 663
Score = 32.7 bits (73), Expect = 0.78
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 242 ASSSTLRRQPVDMTYSALPESKPIMTSSEAFEPPKYLMLGQQAVGGVPIQPSVRTQMWLT 301
AS+ST RR ++ + P+ K S ++E PK +G Q + + PS+ ++ T
Sbjct: 322 ASASTTRRTSSRVSSRSAPQGK----GSSSWEKPKIQHVGLQPSASLELGPSLDEEIPTT 377
Query: 302 EQLRTNPLEGR 312
+ +P EG+
Sbjct: 378 STMLVSPAEGQ 388
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 32.7 bits (73), Expect = 0.78
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 423 ENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKVGF 482
+N L+ SQ +++L + ++++++ NE L Q L +E+ K+L EK+
Sbjct: 95 KNKELEIAQDRNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKE 154
Query: 483 SN 484
SN
Sbjct: 155 SN 156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,096,604
Number of Sequences: 37866
Number of extensions: 934177
Number of successful extensions: 3425
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 3164
Number of HSP's gapped (non-prelim): 302
length of query: 496
length of database: 18,247,518
effective HSP length: 106
effective length of query: 390
effective length of database: 14,233,722
effective search space: 5551151580
effective search space used: 5551151580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.