Guide to the Human Genome
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Name: KIF20B Sequence: fasta or formatted (1780aa) NCBI GI: 46049114
Description:

M-phase phosphoprotein 1

Referenced in:

Kinesins
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         74           2
 C cysteine            1.3         24           1
 D aspartate           5.1         90           2
 E glutamate          12.8        228           5
 F phenylalanine       2.8         50           2
 G glycine             2.1         38           1
 H histidine           1.4         25           1
 I isoleucine          6.7        120           2
 K lysine             11.7        208           3
 L leucine            10.4        185           2
 M methionine          1.6         28           2
 N asparagine          6.2        110           2
 P proline             2.1         37           2
 Q glutamine           7.0        124           2
 R arginine            4.3         76           2
 S serine              8.3        148           3
 T threonine           5.4         96           2
 V valine              4.7         83           2
 W tryptophan          0.4          8           1
 Y tyrosine            1.6         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   M-phase phosphoprotein 1 
KIF20A                0.111   kinesin family member 20A 
KIF23                 0.067   kinesin family member 23 isoform 2 
KIF23                 0.067   kinesin family member 23 isoform 1 
CENPE                 0.066   centromere protein E 
KIF15                 0.059   kinesin family member 15 
KIF21A                0.044   kinesin family member 21A 
KIF16B                0.044   kinesin-like motor protein C20orf23 
KIF4A                 0.043   kinesin family member 4 
KIF4B                 0.041   kinesin family member 4B 
GOLGA4                0.040   golgi autoantigen, golgin subfamily a, 4 
KIF5C                 0.039   kinesin family member 5C 
EEA1                  0.038   early endosome antigen 1, 162kD 
MYH8                  0.037   myosin, heavy chain 8, skeletal muscle, perinatal [...
CLIP1                 0.037   restin isoform a 
GOLGB1                0.037   golgi autoantigen, golgin subfamily b, macrogolgin ...
KIF5B                 0.036   kinesin family member 5B 
KIF11                 0.035   kinesin family member 11 
MYH10                 0.035   myosin, heavy polypeptide 10, non-muscle 
CCDC88A               0.035   coiled-coil domain containing 88A isoform 2 
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CLIP1                 0.035   restin isoform b 
CCDC88A               0.035   coiled-coil domain containing 88A isoform 1 
KIF3A                 0.035   kinesin family member 3A 
KIF3B                 0.035   kinesin family member 3B 
MYH13                 0.035   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TRIP11                0.034   thyroid hormone receptor interactor 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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