CCDC21 27494

Name: CCDC21	Sequence: fasta or formatted (762aa)		NCBI GI: 40538794
Description: coiled-coil domain containing 21		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 44 2 C cysteine 1.6 12 1 D aspartate 4.1 31 1 E glutamate 10.5 80 2 F phenylalanine 1.8 14 1 G glycine 4.7 36 1 H histidine 3.1 24 2 I isoleucine 3.7 28 1 K lysine 6.0 46 3 L leucine 11.0 84 3 M methionine 2.0 15 2 N asparagine 2.4 18 2 P proline 5.9 45 2 Q glutamine 9.8 75 3 R arginine 5.8 44 2 S serine 10.8 82 3 T threonine 4.7 36 2 V valine 4.6 35 1 W tryptophan 0.8 6 1 Y tyrosine 0.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 21 C6orf204 0.233 chromosome 6 open reading frame 204 isoform a [Homo... C6orf204 0.075 chromosome 6 open reading frame 204 isoform b [Homo... CEP250 0.041 centrosomal protein 2 NUMA1 0.039 nuclear mitotic apparatus protein 1 ERC1 0.039 RAB6-interacting protein 2 isoform delta LOC440243 0.038 PREDICTED: Putative golgin subfamily A member 6-lik... LOC645202 0.036 PREDICTED: hypothetical protein LOC645202 ERC1 0.036 RAB6-interacting protein 2 isoform epsilon CCDC88A 0.036 coiled-coil domain containing 88A isoform 2 CCDC88A 0.036 coiled-coil domain containing 88A isoform 1 PDE4DIP 0.036 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.036 phosphodiesterase 4D interacting protein isoform 1 ... LOC100133758 0.036 PREDICTED: hypothetical protein, partial LOC283767 0.036 golgi autoantigen, golgin subfamily a-like CROCC 0.036 ciliary rootlet coiled-coil GOLGA3 0.036 Golgi autoantigen, golgin subfamily a, 3 LOC727832 0.035 golgi autoantigen, golgin subfamily a-like GOLGB1 0.034 golgi autoantigen, golgin subfamily b, macrogolgin ... CLIP1 0.034 restin isoform b CLIP1 0.034 restin isoform a GOLGA1 0.034 golgin 97 PPL 0.034 periplakin TCHH 0.034 trichohyalin PDE4DIP 0.034 phosphodiesterase 4D interacting protein isoform 5 [... CGNL1 0.033 cingulin-like 1 MYH4 0.033 myosin, heavy polypeptide 4, skeletal muscle PLEC1 0.033 plectin 1 isoform 11 PLEC1 0.033 plectin 1 isoform 10 PLEC1 0.033 plectin 1 isoform 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.