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Search of human proteins with 149408146
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149408146 TOX high mobility group box family member 2
isoform b [Homo sapiens]
(488 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408146 TOX high mobility group box family member 2 isoform... 993 0.0
gi|149408144 TOX high mobility group box family member 2 isoform... 893 0.0
gi|149408141 TOX high mobility group box family member 2 isoform... 872 0.0
gi|14249636 TOX high mobility group box family member 2 isoform ... 872 0.0
gi|7662322 thymus high mobility group box protein TOX [Homo sapi... 328 9e-90
gi|226246533 TOX high mobility group box family member 3 isoform... 236 3e-62
gi|226054295 TOX high mobility group box family member 3 isoform... 234 1e-61
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 181 1e-45
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 68 2e-11
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 66 6e-11
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 62 2e-09
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 62 2e-09
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 62 2e-09
gi|210032580 SET domain containing 1B [Homo sapiens] 60 4e-09
gi|239742753 PREDICTED: similar to high mobility group box 3 iso... 60 6e-09
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho... 59 8e-09
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho... 59 8e-09
gi|113416897 PREDICTED: similar to high mobility group box 3 iso... 59 8e-09
gi|4504425 high-mobility group box 1 [Homo sapiens] 59 1e-08
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 59 1e-08
gi|71143137 high-mobility group box 3 [Homo sapiens] 59 1e-08
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 59 1e-08
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 59 1e-08
gi|93102371 polybromo 1 isoform 2 [Homo sapiens] 59 1e-08
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 57 3e-08
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 57 3e-08
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 57 3e-08
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 57 5e-08
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 57 5e-08
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 57 5e-08
>gi|149408146 TOX high mobility group box family member 2 isoform b
[Homo sapiens]
Length = 488
Score = 993 bits (2566), Expect = 0.0
Identities = 488/488 (100%), Positives = 488/488 (100%)
Query: 1 MQQTRTEAVAGAFSRCLGFCGMRLGLLLLARHWCIAGVFPQKFDGDSAYVGMSDGNPELL 60
MQQTRTEAVAGAFSRCLGFCGMRLGLLLLARHWCIAGVFPQKFDGDSAYVGMSDGNPELL
Sbjct: 1 MQQTRTEAVAGAFSRCLGFCGMRLGLLLLARHWCIAGVFPQKFDGDSAYVGMSDGNPELL 60
Query: 61 STSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQ 120
STSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQ
Sbjct: 61 STSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQ 120
Query: 121 AMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSAL 180
AMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSAL
Sbjct: 121 AMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSAL 180
Query: 181 SQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKK 240
SQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKK
Sbjct: 181 SQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKK 240
Query: 241 AKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQ 300
AKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQ
Sbjct: 241 AKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQ 300
Query: 301 KQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLG 360
KQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLG
Sbjct: 301 KQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLG 360
Query: 361 SKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMAL 420
SKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMAL
Sbjct: 361 SKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMAL 420
Query: 421 QVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLP 480
QVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLP
Sbjct: 421 QVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLP 480
Query: 481 RDKSLYLT 488
RDKSLYLT
Sbjct: 481 RDKSLYLT 488
>gi|149408144 TOX high mobility group box family member 2 isoform a
[Homo sapiens]
Length = 506
Score = 893 bits (2307), Expect = 0.0
Identities = 447/474 (94%), Positives = 447/474 (94%), Gaps = 27/474 (5%)
Query: 42 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 101
KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY
Sbjct: 33 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 92
Query: 102 HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG 161
HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG
Sbjct: 93 HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG 152
Query: 162 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES 221
RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES
Sbjct: 153 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES 212
Query: 222 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT 281
EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT
Sbjct: 213 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT 272
Query: 282 FGDVSKIVASMWDSLGEEQKQ---------------------------SSPDQGETKSTQ 314
FGDVSKIVASMWDSLGEEQKQ SSPDQGETKSTQ
Sbjct: 273 FGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQ 332
Query: 315 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 374
ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP
Sbjct: 333 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 392
Query: 375 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 434
PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ
Sbjct: 393 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 452
Query: 435 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488
DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 453 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506
>gi|149408141 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 872 bits (2253), Expect = 0.0
Identities = 437/464 (94%), Positives = 437/464 (94%), Gaps = 27/464 (5%)
Query: 52 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 111
MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
Query: 112 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 171
GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
Query: 172 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 231
MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
Query: 232 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 291
RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
Query: 292 MWDSLGEEQKQ---------------------------SSPDQGETKSTQANPPAKMLPP 324
MWDSLGEEQKQ SSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
Query: 325 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 384
KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
Query: 385 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 444
HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
Query: 445 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488
SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
>gi|14249636 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 872 bits (2253), Expect = 0.0
Identities = 437/464 (94%), Positives = 437/464 (94%), Gaps = 27/464 (5%)
Query: 52 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 111
MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
Query: 112 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 171
GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
Query: 172 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 231
MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
Query: 232 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 291
RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
Query: 292 MWDSLGEEQKQ---------------------------SSPDQGETKSTQANPPAKMLPP 324
MWDSLGEEQKQ SSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
Query: 325 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 384
KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
Query: 385 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 444
HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
Query: 445 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488
SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
>gi|7662322 thymus high mobility group box protein TOX [Homo
sapiens]
Length = 526
Score = 328 bits (840), Expect = 9e-90
Identities = 209/516 (40%), Positives = 283/516 (54%), Gaps = 76/516 (14%)
Query: 34 CIAGVFPQKFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLH 93
C+ + KFDG++ Y+ M++ + + + SQ+Y G S +ED+ IPPITPP+LP+ SL+H
Sbjct: 26 CLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVH 85
Query: 94 LGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHS 153
L + E+ YHSLCH + NGLLP + Q MDLP I VSNML QD LLS + + ++ +
Sbjct: 86 LNEVESGYHSLCHPMNHNGLLPFHP-QNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNP 144
Query: 154 EVAAYDS----------GRPGPLLGRPAMLA-SHMSALSQSQLISQMGIR---SSIAHSS 199
E Y S G+P + +P M+ ++ ++QSQL +Q+G+ S++ H+S
Sbjct: 145 EGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNS 204
Query: 200 PSPPGSKSATPSPSSSTQEEESEVHFKISG-EKRPSADPGKKAKNPKKKKKKDPNEPQKP 258
PSPPGSKSATPSPSSS E+E + KI+G EKRP++D GKK K PKKKKKKDPNEPQKP
Sbjct: 205 PSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKP 264
Query: 259 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ---------------- 302
VSAYALFFRDTQAAIKGQNP+ATFG+VSKIVASMWD LGEEQKQ
Sbjct: 265 VSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQ 324
Query: 303 --------SSPDQGETKSTQANPPAKMLPPKQPMYAMPGLA-SFLTPSDLQAFRSGASP- 352
S E + + P +++ K ++ P A S L S + G +P
Sbjct: 325 LAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPH 384
Query: 353 -----ASLARTLGSKS--------LLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALL 399
SL R + K + ++ SPPPP +SP LHQ L++ H +
Sbjct: 385 LTAMHPSLPRNIAPKPNNQMPVTVSIANMAVSPPPP--LQISPPLHQHLNMQQHQPLTMQ 442
Query: 400 SP-----PVSMSPAPQPPVLPTPMALQ--VQLAMSPSPPGPQDFPHISEFPSSSGSCSPG 452
P P+ + A P + LQ Q ++P+ Q E+ S C
Sbjct: 443 QPLGNQLPMQVQSALHSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRS--GCRNP 500
Query: 453 PSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488
P P DW++ Y S + RDK+LYLT
Sbjct: 501 PPQPV---DWNNDYCSS-------GGMQRDKALYLT 526
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 236 bits (602), Expect = 3e-62
Identities = 162/432 (37%), Positives = 231/432 (53%), Gaps = 55/432 (12%)
Query: 42 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 101
KF ++ Y+ M++ N + S+T++ S +E++EIPPITPP +P+L + D +
Sbjct: 25 KFGNNNNYMNMAEANNAFFAASETFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPF 83
Query: 102 HSLCHGLTPNG--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY 158
+L L G P + Q++DLP+I +S N++ QD L S L Q H++V+ Y
Sbjct: 84 QALSDPLPSQGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQY 141
Query: 159 ---------------DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSP 200
D+ R G M + ++ ++QSQL +Q+G+ +S+ H+SP
Sbjct: 142 RQDPSLIMRSIVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSP 195
Query: 201 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVS 260
SPP SKSATPSPSSS EE+++ + GEKR + D GKK K PKKKKKKDPNEPQKPVS
Sbjct: 196 SPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVS 255
Query: 261 AYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKSTQANPPAK 320
AYALFFRDTQAAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ + E
Sbjct: 256 AYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAK-------- 307
Query: 321 MLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPL 380
K+ + A+ + L + S+ +TL S +L L + P
Sbjct: 308 ----KEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNTP------- 356
Query: 381 SPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPM-ALQVQLAMSPSPPGPQDFPHI 439
+ H +S P L + S AP+P + PM + + ++ + P P I
Sbjct: 357 -LSQHGTVSASPQT----LQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLI 411
Query: 440 SEFPSSSGSCSP 451
S ++ +P
Sbjct: 412 SSMGTTMVGSAP 423
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 234 bits (597), Expect = 1e-61
Identities = 168/462 (36%), Positives = 239/462 (51%), Gaps = 74/462 (16%)
Query: 13 FSRCLGFCGMRLGLLLLARHWCIAGVFPQKFDGDSAYVGMSDGNPELLSTS-QTYNGQSE 71
F++CLG+ G KF ++ Y+ M++ N + S QT++ S
Sbjct: 18 FAQCLGYYGY------------------SKFGNNNNYMNMAEANNAFFAASEQTFHTPSL 59
Query: 72 NNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNG--LLPAYSYQAMDLPAIMV 129
+E++EIPPITPP +P+L + D + +L L G P + Q++DLP+I +
Sbjct: 60 GDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITI 118
Query: 130 S-NMLAQDSHLLSGQLPTIQEMVHSEVAAY---------------DSGRPGPLLGRPAML 173
S N++ QD L S L Q H++V+ Y D+ R G M
Sbjct: 119 SRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMRSIVHMTDAARSG------VMP 170
Query: 174 ASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGE 230
+ ++ ++QSQL +Q+G+ +S+ H+SPSPP SKSATPSPSSS EE+++ + GE
Sbjct: 171 PAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGE 230
Query: 231 KRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVA 290
KR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+VSKIVA
Sbjct: 231 KRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVA 290
Query: 291 SMWDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGA 350
SMWDSLGEEQKQ + E K+ + A+ + L
Sbjct: 291 SMWDSLGEEQKQVYKRKTEAAK------------KEYLKALAAYRASLVSKAAAESAEAQ 338
Query: 351 SPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ 410
+ S+ +TL S +L L + P + H +S P L + S AP+
Sbjct: 339 TIRSVQQTLASTNLTSSLLLNTP--------LSQHGTVSASPQT----LQQSLPRSIAPK 386
Query: 411 PPVLPTPM-ALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSP 451
P + PM + + ++ + P P IS ++ +P
Sbjct: 387 PLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVGSAP 428
>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
Length = 621
Score = 181 bits (459), Expect = 1e-45
Identities = 135/372 (36%), Positives = 191/372 (51%), Gaps = 49/372 (13%)
Query: 45 GDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSL 104
G+ Y+ ++ + LS ++T++ S +E++EIPPI+ + P L + D + L
Sbjct: 6 GNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPS---LAVSDVVGHFDDL 62
Query: 105 CH-GLTPNGLLPA-YSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGR 162
+ +G A Y Q +D+P M ++ Q LLSG L ++ HS Y +
Sbjct: 63 ADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLT--MDLDHSIGTQYSANP 120
Query: 163 PG----PLLGRPAMLASH--MSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPS 213
P P+ + L H ++ + QS+L SQ+G+ +I + SP S TPSP+
Sbjct: 121 PVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPT 180
Query: 214 SSTQEEESE-VHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAA 272
SS E+ E ++ +K + GKK K PKK+KKKDPNEPQKPVSAYALFFRDTQAA
Sbjct: 181 SSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAA 240
Query: 273 IKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMP 332
IKGQNP+ATFG+VSKIVASMWDSLGEEQKQ + E + +
Sbjct: 241 IKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKE---------------YLK 285
Query: 333 GLASFLTPSDLQAFRSGASPASLARTLGSKSLLPG-LSASPPPPPSFPLSPTLHQQLSLP 391
LA++ + QA T+ + L P S +P PPP + P S+
Sbjct: 286 ALAAYKDNQECQA------------TVETVELDPAPPSQTPSPPPMATVDPASPAPASIE 333
Query: 392 PHAQGALLSPPV 403
P A LSP +
Sbjct: 334 PPA----LSPSI 341
Score = 41.6 bits (96), Expect = 0.002
Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 62/195 (31%)
Query: 335 ASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQ--LSLPP 392
A +T S LQA + A+ AS+ LP PPP P PT Q L PP
Sbjct: 416 AQIVTRSVLQAAAAAAAAASMQ--------LPPPRLQPPPLQQMPQPPTQQQVTILQQPP 467
Query: 393 HAQGALLSPP--VSMSPAPQPPVL-----PTPMALQVQLAMSP-----SPPGPQDFP--- 437
Q PP V ++ QPP L P P L++Q + P SP P +
Sbjct: 468 PLQAMQQPPPQKVRINLQQQPPPLQIKSVPLP-TLKMQTTLVPPTVESSPERPMNNSPEA 526
Query: 438 HISEFPSSSGSC----------------------------SPGP--------SNPTSSGD 461
H E PS C SP P + P S D
Sbjct: 527 HTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKD 586
Query: 462 WDSSYPSGECGISTC 476
WD+ Y S EC + C
Sbjct: 587 WDNEYCSNECVVKHC 601
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 67.8 bits (164), Expect = 2e-11
Identities = 106/399 (26%), Positives = 149/399 (37%), Gaps = 58/399 (14%)
Query: 96 DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEV 155
D S HS L NG+ ++ + L + N + D HL + + S
Sbjct: 79 DSSGSGHSAFEPLVANGVPASFVPKPGSLKRGL--NSQSSDDHL---NKRSRSSSMSSLT 133
Query: 156 AAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS-PSS 214
AY SG P R A+ +S+ S SQL + G SS SP S+S TP P+
Sbjct: 134 GAYASGIPSS--SRNAITSSYSSTRGISQLWKRNGPSSS---PFSSPASSRSQTPERPAK 188
Query: 215 STQEEESEVHFKISGEKRPSA----DPGKKAKNPKKKKKKDPNEPQKPVSA--------Y 262
+EEE H S P A G+KA + +KK++ N P S+
Sbjct: 189 KIREEELCHH---SSSSTPLAADRESQGEKAADTTPRKKQNSNSQSTPGSSGQRKRKVQL 245
Query: 263 ALFFRDTQAAIK-----GQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKS----- 312
R Q + G + +A D+ K + W + E K + T++
Sbjct: 246 LPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPITQ 305
Query: 313 ----------TQANPPAKMLPPK-QPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGS 361
A+PP +L P P+ + L TP L A A+
Sbjct: 306 PSFTFTLPAAAPASPPTSLLAPSTNPL--LESLKKMQTPPSLPPCPESAGAATTEALSPP 363
Query: 362 K--SLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ---PPVLPT 416
K SLLP L S PP SP+ S PP L+ P SM PA PP L
Sbjct: 364 KTPSLLPPLGLSQSGPPGLLPSPSFD---SKPPTTLLGLIPAP-SMVPATDTKAPPTLQA 419
Query: 417 PMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSN 455
A + Q +PSP Q F ++ S S +P S+
Sbjct: 420 ETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASS 458
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 66.2 bits (160), Expect = 6e-11
Identities = 105/399 (26%), Positives = 149/399 (37%), Gaps = 58/399 (14%)
Query: 96 DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEV 155
D S HS L +G+ ++ + L + N + D HL + + S
Sbjct: 79 DSSGSGHSAFEPLVASGVPASFVPKPGSLKRGL--NSQSSDDHL---NKRSRSSSMSSLT 133
Query: 156 AAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS-PSS 214
AY SG P R A+ +S+ S SQL + G SS SP S+S TP P+
Sbjct: 134 GAYTSGIPSS--SRNAITSSYSSTRGISQLWKRNGPSSS---PFSSPASSRSQTPERPAK 188
Query: 215 STQEEESEVHFKISGEKRPSA----DPGKKAKNPKKKKKKDPNEPQKPVSA--------Y 262
+EEE H S P A G+KA + +KK++ N P S+
Sbjct: 189 KIREEELCHH---SSSSTPLAADKESQGEKAADTTPRKKQNSNSQSTPGSSGQRKRKVQL 245
Query: 263 ALFFRDTQAAIK-----GQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKS----- 312
R Q + G + +A D+ K + W + E K + T++
Sbjct: 246 LPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPTTQ 305
Query: 313 ----------TQANPPAKMLPPK-QPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGS 361
A+PP +L P P+ + L TP L A A+
Sbjct: 306 PSFTFTLPAAATASPPTSLLAPSTNPL--LESLKKMQTPPSLPPCPESAGAATTEALSPP 363
Query: 362 K--SLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ---PPVLPT 416
K SLLP L S PP SP+ S PP L+ P SM PA PP L
Sbjct: 364 KTPSLLPPLGLSQSGPPGLLPSPSFD---SKPPTTLLGLIPAP-SMVPATDTKAPPTLQA 419
Query: 417 PMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSN 455
A + Q +PSP Q F ++ S S +P S+
Sbjct: 420 ETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASS 458
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 61.6 bits (148), Expect = 2e-09
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 242 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 301
K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277
Query: 302 Q 302
Q
Sbjct: 278 Q 278
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 61.6 bits (148), Expect = 2e-09
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 242 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 301
K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277
Query: 302 Q 302
Q
Sbjct: 278 Q 278
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 61.6 bits (148), Expect = 2e-09
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 242 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 301
K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277
Query: 302 Q 302
Q
Sbjct: 278 Q 278
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 60.1 bits (144), Expect = 4e-09
Identities = 73/266 (27%), Positives = 102/266 (38%), Gaps = 58/266 (21%)
Query: 174 ASHMSALSQSQLISQMGIRSSIAHSS-PSPPGSKSATPSPSSSTQEEESEVHFKISGEKR 232
+S +S L+ SQ G R SS PS G + +P+P + E+E + R
Sbjct: 537 SSQLSPLAPFGTNSQPGFRGPTPPSSRPSSTGLEDISPTPLPDSDEDEE---LDLGLGPR 593
Query: 233 PSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASM 292
P +PG P +P +S A D + + P++ D +
Sbjct: 594 PPPEPG-------------PPDPAGLLSQTAEVALDL---VGDRTPTSEKMDEGQ----- 632
Query: 293 WDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASP 352
S GE+ + S + T A+ P +PM PG A+ A+P
Sbjct: 633 -QSSGEDMEISDDEMPSAPITSADCP-------KPMVVTPGAAAV------------AAP 672
Query: 353 ASLARTLGSKSLLPGLSASPPPP------PSFPLSPTLHQQLSLPPHAQGALLSPPVSMS 406
+ LA TL PG PPPP P FP+ P L PP A A+ PP
Sbjct: 673 SVLAPTLPLPPP-PGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPP---P 728
Query: 407 PAPQPPVLPTPMALQVQLAMSPSPPG 432
P P PP +P P L + P PPG
Sbjct: 729 PLPAPPGVPPPPILP---PLPPFPPG 751
Score = 38.5 bits (88), Expect = 0.014
Identities = 60/279 (21%), Positives = 100/279 (35%), Gaps = 34/279 (12%)
Query: 207 SATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL-- 264
S + SSS E SE F+ S E PS+ ++ +++++++ E + A
Sbjct: 1105 SKAEATSSSESSESSE--FESSSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESMASAG 1162
Query: 265 ---FFRD-TQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKSTQANPPAK 320
F +D +AA+ P+ + + V +++ E++ S D+ P
Sbjct: 1163 PEDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPEERPSMLDEPPLPVGVEEPADS 1222
Query: 321 MLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPL 380
PP++P + G SP A+ + ++ P LS P +
Sbjct: 1223 REPPEEPGLSQEGAMLL-------------SPEPPAKEVEAR---PPLSPERAPEHDLEV 1266
Query: 381 SPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHIS 440
P L LP L PP+ P P P P P + PP P H
Sbjct: 1267 EPEPPMMLPLP-------LQPPLP-PPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPP 1318
Query: 441 EFPSSSGSCSPGPSNPT--SSGDWDSSYPSGECGISTCS 477
P GS + S T ++ + G G+S S
Sbjct: 1319 HTPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSLSS 1357
Score = 36.6 bits (83), Expect = 0.053
Identities = 56/257 (21%), Positives = 90/257 (35%), Gaps = 30/257 (11%)
Query: 199 SPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKP 258
SP PP + P S + E ++ ++ E + P + + P+ P +P
Sbjct: 1240 SPEPPAKEVEARPPLSPERAPEHDL--EVEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEP 1297
Query: 259 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKSTQANPP 318
+ A + +P T G + S+ S E ++P GE + +
Sbjct: 1298 ETTDASHPSVPPEPLAEDHPPHTPG----LCGSLAKSQSTETVPATPG-GEPPLSGGSSG 1352
Query: 319 AKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSF 378
+ P+ +PG + F P+ + SG P + PG S P S
Sbjct: 1353 LSLSSPQ-----VPG-SPFSYPAPSPSLSSGGLPRT-----------PGRDFSFTPTFSE 1395
Query: 379 PLSPTLHQQLSLPP----HAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 434
P P L LP G L SP + + P P LP P+ L + + P
Sbjct: 1396 PSGPLLLPVCPLPTGRRDERSGPLASPVLLETGLPLPLPLPLPLPLALPAVLRAQARAPT 1455
Query: 435 DFPHISEFPSSSGSCSP 451
P + P+ SC P
Sbjct: 1456 PLPPL--LPAPLASCPP 1470
Score = 36.2 bits (82), Expect = 0.069
Identities = 35/133 (26%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 318 PAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPS 377
PA + PM PG PS L P + A LLPG P
Sbjct: 1462 PAPLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPG-------QPQ 1514
Query: 378 FPLSPTLHQQLSLPPHAQGA-LLSPPVSMSPAPQPPVLPTPM--------ALQVQLAMSP 428
P+ P+ H ++ + A + +PP + P P PP P P+ L Q
Sbjct: 1515 TPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEA 1574
Query: 429 SPPGPQDFPHISE 441
PPGP+ ++E
Sbjct: 1575 IPPGPRGRDEVTE 1587
>gi|239742753 PREDICTED: similar to high mobility group box 3
isoform 2 [Homo sapiens]
Length = 183
Score = 59.7 bits (143), Expect = 6e-09
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 201 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 258
SP SK + + + +E+S+ +K ++ K P K KKKKDP+ P++P
Sbjct: 17 SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73
Query: 259 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ 302
S + LF + + IK NP + GDV+K + MW++L + +KQ
Sbjct: 74 PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQ 117
>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 59.3 bits (142), Expect = 8e-09
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 239 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 296
++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L
Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
Query: 297 GEEQKQ 302
+ +KQ
Sbjct: 130 NDSEKQ 135
Score = 37.7 bits (86), Expect = 0.024
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQG 308
K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 309 ETKST----QANPPAK-------MLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLAR 357
+T + PAK PK+P +S + P +++ G S +A+
Sbjct: 62 KTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPK-IKSTNPGISIGDVAK 120
Query: 358 TLG 360
LG
Sbjct: 121 KLG 123
>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 59.3 bits (142), Expect = 8e-09
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 239 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 296
++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L
Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
Query: 297 GEEQKQ 302
+ +KQ
Sbjct: 130 NDSEKQ 135
Score = 37.7 bits (86), Expect = 0.024
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQG 308
K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 309 ETKST----QANPPAK-------MLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLAR 357
+T + PAK PK+P +S + P +++ G S +A+
Sbjct: 62 KTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPK-IKSTNPGISIGDVAK 120
Query: 358 TLG 360
LG
Sbjct: 121 KLG 123
>gi|113416897 PREDICTED: similar to high mobility group box 3
isoform 1 [Homo sapiens]
Length = 201
Score = 59.3 bits (142), Expect = 8e-09
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 239 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 296
++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L
Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
Query: 297 GEEQKQ 302
+ +KQ
Sbjct: 130 NDSEKQ 135
Score = 37.7 bits (86), Expect = 0.024
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQG 308
K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 309 ETKST----QANPPAK-------MLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLAR 357
+T + PAK PK+P +S + P +++ G S +A+
Sbjct: 62 KTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPK-IKSTNPGISIGDVAK 120
Query: 358 TLG 360
LG
Sbjct: 121 KLG 123
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 58.9 bits (141), Expect = 1e-08
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 242 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 301
K KKK KDPN P++P SA+ LF + + IKG++P + GDV+K + MW++ + K
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 302 Q 302
Q
Sbjct: 142 Q 142
Score = 38.5 bits (88), Expect = 0.014
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 26/133 (19%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLG--------- 297
K DP +P+ +S+YA F + + K ++P A+ F + SK + W ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 298 ----------EEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 347
E K P +GETK +P A PK+P A S P ++
Sbjct: 63 MAKADKARYEREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPK-IKGEH 117
Query: 348 SGASPASLARTLG 360
G S +A+ LG
Sbjct: 118 PGLSIGDVAKKLG 130
>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 58.9 bits (141), Expect = 1e-08
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 242 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 301
K KKK KDPN P++P SA+ LF + IKG++P + GDV+K + MW++ + K
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 302 QSSPDQGETKSTQ 314
Q GE K+ +
Sbjct: 142 Q----PGEKKAAK 150
Score = 33.5 bits (75), Expect = 0.45
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQSSPD 306
K DP +P+ +S+YA F + + K ++ A+ F + S + W ++ ++K D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
Query: 307 QGETKSTQANPPAK-MLPPK 325
+ T K +PPK
Sbjct: 63 MAKADKTHYERQMKTYIPPK 82
>gi|71143137 high-mobility group box 3 [Homo sapiens]
Length = 200
Score = 58.9 bits (141), Expect = 1e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 247 KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ 302
KKKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ
Sbjct: 85 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQ 140
Score = 34.7 bits (78), Expect = 0.20
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQSSPD 306
K DP +P+ +SAYA F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
Query: 307 QGETKSTQANPPAKMLPP 324
+ + + K P
Sbjct: 63 MAKADKVRYDREMKDYGP 80
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 211 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK-------KDPNEPQKPVSAYA 263
S SSS+ E +S+ K KR K AK+ K +KK KDPN P++P+SAY
Sbjct: 500 SASSSSNEGDSDRDEK----KRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYM 555
Query: 264 LFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ 302
L+ ++ IK +P + D+SK +W + +E+K+
Sbjct: 556 LWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKE 594
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 58.5 bits (140), Expect = 1e-08
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 28/207 (13%)
Query: 233 PSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASM 292
P P K+ K KK+ ++ + +S Y LF + +A IK Q+P +FG++S++V +
Sbjct: 1325 PYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTE 1384
Query: 293 WDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASP 352
W +L +K E + P + P + P+ + + S +Q G P
Sbjct: 1385 WRNLETAKK------AEYEGMMGGYPPGLPPLQGPVDGLVSMGS------MQPLHPGGPP 1432
Query: 353 ASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLP-----PHAQG-ALLSPPVSMS 406
L PG+ P PP ++ + + P P+ Q +L PP +
Sbjct: 1433 --------PHHLPPGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQA 1484
Query: 407 PAPQPPVLPT--PMALQVQLAMSPSPP 431
P P P P P+ Q M +PP
Sbjct: 1485 PPPYPGPHPAGPPVIQQPTTPMFVAPP 1511
>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
Length = 1582
Score = 58.5 bits (140), Expect = 1e-08
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 32/245 (13%)
Query: 195 IAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNE 254
+ PSP K + + E + + GE+ + P K+ K KK+ ++
Sbjct: 1271 VPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSESTP----KSAKGSAKKEGSK 1326
Query: 255 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQSSPDQGETKSTQ 314
+ +S Y LF + +A IK Q+P +FG++S++V + W +L +K E +
Sbjct: 1327 RKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKK------AEYEGMM 1380
Query: 315 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 374
P + P + P+ + + S +Q G P L PG+ P
Sbjct: 1381 GGYPPGLPPLQGPVDGLVSMGS------MQPLHPGGPP--------PHHLPPGVPGLPGI 1426
Query: 375 PPSFPLSPTLHQQLSLP-----PHAQG-ALLSPPVSMSPAPQPPVLPT--PMALQVQLAM 426
PP ++ + + P P+ Q +L PP +P P P P P+ Q M
Sbjct: 1427 PPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPM 1486
Query: 427 SPSPP 431
+PP
Sbjct: 1487 FVAPP 1491
>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 57.4 bits (137), Expect = 3e-08
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 245 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ 302
K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQ 139
Score = 32.3 bits (72), Expect = 1.00
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQK----- 301
K DP +PQ +SAYA + K +NP F + SK + W ++ ++K
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 302 ----------QSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGAS 351
+ D G K + P PK+P S P +++ G S
Sbjct: 63 MAKADEVCYDREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFRPK-IKSTNPGIS 118
Query: 352 PASLARTLG 360
+A+ LG
Sbjct: 119 IGDVAKKLG 127
>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 57.4 bits (137), Expect = 3e-08
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 245 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ 302
K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQ 139
Score = 32.3 bits (72), Expect = 1.00
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQK----- 301
K DP +PQ +SAYA + K +NP F + SK + W ++ ++K
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 302 ----------QSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGAS 351
+ D G K + P PK+P S P +++ G S
Sbjct: 63 MAKADEVCYDREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFRPK-IKSTNPGIS 118
Query: 352 PASLARTLG 360
+A+ LG
Sbjct: 119 IGDVAKKLG 127
>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 57.4 bits (137), Expect = 3e-08
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 245 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ 302
K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQ 139
Score = 32.3 bits (72), Expect = 1.00
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Query: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQK----- 301
K DP +PQ +SAYA + K +NP F + SK + W ++ ++K
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 302 ----------QSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGAS 351
+ D G K + P PK+P S P +++ G S
Sbjct: 63 MAKADEVCYDREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFRPK-IKSTNPGIS 118
Query: 352 PASLARTLG 360
+A+ LG
Sbjct: 119 IGDVAKKLG 127
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 56.6 bits (135), Expect = 5e-08
Identities = 64/224 (28%), Positives = 87/224 (38%), Gaps = 39/224 (17%)
Query: 269 TQAAIKGQNPSATFGDVSKIVASMWDSLG---EEQKQSSPDQGETKSTQANPPAKMLP-- 323
T +A+K + P+ + K++ + ++ + E + KS +A P + P
Sbjct: 673 TCSAVKKRKPTTCM--LQKVLLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGS 730
Query: 324 --PKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKS--LLPGLSASPPPPPSFP 379
P + + P + + SG P L T S P L+ + PPPP P
Sbjct: 731 GFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLP 790
Query: 380 LSPTLHQQLSLPPH----------AQGAL--LSPPVSMSPAPQPPVLPTPMALQVQLAMS 427
P S PH AQ L LSP VS SP+P PPV P + A S
Sbjct: 791 TVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEP------LMSAAS 844
Query: 428 PSPP----GPQDFPHISEFPSSSGSCSPGP------SNPTSSGD 461
P PP S F SSS S SP P S+ SSGD
Sbjct: 845 PGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGD 888
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 56.6 bits (135), Expect = 5e-08
Identities = 64/224 (28%), Positives = 87/224 (38%), Gaps = 39/224 (17%)
Query: 269 TQAAIKGQNPSATFGDVSKIVASMWDSLG---EEQKQSSPDQGETKSTQANPPAKMLP-- 323
T +A+K + P+ + K++ + ++ + E + KS +A P + P
Sbjct: 874 TCSAVKKRKPTTCM--LQKVLLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGS 931
Query: 324 --PKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKS--LLPGLSASPPPPPSFP 379
P + + P + + SG P L T S P L+ + PPPP P
Sbjct: 932 GFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLP 991
Query: 380 LSPTLHQQLSLPPH----------AQGAL--LSPPVSMSPAPQPPVLPTPMALQVQLAMS 427
P S PH AQ L LSP VS SP+P PPV P + A S
Sbjct: 992 TVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEP------LMSAAS 1045
Query: 428 PSPP----GPQDFPHISEFPSSSGSCSPGP------SNPTSSGD 461
P PP S F SSS S SP P S+ SSGD
Sbjct: 1046 PGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGD 1089
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 56.6 bits (135), Expect = 5e-08
Identities = 64/224 (28%), Positives = 87/224 (38%), Gaps = 39/224 (17%)
Query: 269 TQAAIKGQNPSATFGDVSKIVASMWDSLG---EEQKQSSPDQGETKSTQANPPAKMLP-- 323
T +A+K + P+ + K++ + ++ + E + KS +A P + P
Sbjct: 874 TCSAVKKRKPTTCM--LQKVLLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGS 931
Query: 324 --PKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKS--LLPGLSASPPPPPSFP 379
P + + P + + SG P L T S P L+ + PPPP P
Sbjct: 932 GFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLP 991
Query: 380 LSPTLHQQLSLPPH----------AQGAL--LSPPVSMSPAPQPPVLPTPMALQVQLAMS 427
P S PH AQ L LSP VS SP+P PPV P + A S
Sbjct: 992 TVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEP------LMSAAS 1045
Query: 428 PSPP----GPQDFPHISEFPSSSGSCSPGP------SNPTSSGD 461
P PP S F SSS S SP P S+ SSGD
Sbjct: 1046 PGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGD 1089
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,180,704
Number of Sequences: 37866
Number of extensions: 1606828
Number of successful extensions: 18389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 1309
Number of HSP's that attempted gapping in prelim test: 10774
Number of HSP's gapped (non-prelim): 5910
length of query: 488
length of database: 18,247,518
effective HSP length: 106
effective length of query: 382
effective length of database: 14,233,722
effective search space: 5437281804
effective search space used: 5437281804
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.