Guide to the Human Genome
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Name: TOX2 Sequence: fasta or formatted (464aa) NCBI GI: 149408141
Description:

TOX high mobility group box family member 2 isoform c

Referenced in:

Nonhistone Chromosomal Proteins

Other entries for this name:
alt mRNA [464aa] TOX high mobility group box family member 2 isoform c
alt prot [506aa] TOX high mobility group box family member 2 isoform a
alt prot [488aa] TOX high mobility group box family member 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         41           2
 C cysteine            0.9          4           1
 D aspartate           3.7         17           1
 E glutamate           4.5         21           3
 F phenylalanine       1.9          9           2
 G glycine             6.0         28           1
 H histidine           2.6         12           1
 I isoleucine          2.6         12           1
 K lysine              5.8         27           6
 L leucine            10.1         47           2
 M methionine          3.2         15           1
 N asparagine          2.6         12           2
 P proline            13.8         64           5
 Q glutamine           5.6         26           2
 R arginine            2.2         10           1
 S serine             15.9         74           3
 T threonine           4.1         19           1
 V valine              2.4         11           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TOX high mobility group box family member 2 isoform... 
TOX2                  1.000   TOX high mobility group box family member 2 isoform...
TOX2                  1.000   TOX high mobility group box family member 2 isoform ...
TOX2                  0.930   TOX high mobility group box family member 2 isoform...
TOX                   0.378   thymus high mobility group box protein TOX 
TOX3                  0.280   TOX high mobility group box family member 3 isoform...
TOX3                  0.277   TOX high mobility group box family member 3 isoform...
TOX4                  0.216   epidermal Langerhans cell protein LCP1 
HMGB1                 0.060   high-mobility group box 1 
LOC645490             0.060   PREDICTED: similar to hCG1991922 
LOC645490             0.060   PREDICTED: similar to hCG1991922 
LOC645490             0.060   PREDICTED: similar to hCG1991922 
SSRP1                 0.059   structure specific recognition protein 1 
HMGB2                 0.057   high-mobility group box 2 
HMGB2                 0.057   high-mobility group box 2 
HMGB2                 0.057   high-mobility group box 2 
SP100                 0.057   nuclear antigen Sp100 isoform 2 
HMGB1L1               0.053   high-mobility group box 1-like 1 
HMGB3                 0.050   high-mobility group box 3 
LOC729595             0.049   PREDICTED: similar to high mobility group box 3 iso...
LOC729595             0.049   PREDICTED: similar to high mobility group box 3 [Ho...
LOC729595             0.049   PREDICTED: similar to high mobility group box 3 [Ho...
LOC729595             0.049   PREDICTED: similar to high mobility group box 3 iso...
HMG20B                0.047   high-mobility group 20B 
LOC441795             0.045   PREDICTED: high mobility group protein B3-like prot...
LOC441795             0.045   PREDICTED: high mobility group protein B3-like prot...
POM121                0.045   nuclear pore membrane protein 121 
LOC646993             0.044   PREDICTED: similar to high mobility group box 3 [Ho...
LOC646993             0.044   PREDICTED: similar to high mobility group box 3 [Ho...
LOC646993             0.044   PREDICTED: similar to high mobility group box 3 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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