LOC646993 8173

Name: LOC646993	Sequence: fasta or formatted (208aa)		NCBI GI: 169184027
Description: PREDICTED: similar to high mobility group box 3		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [208aa] PREDICTED: similar to high mobility group box 3 alt prot [208aa] PREDICTED: similar to high mobility group box 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 14 2 C cysteine 3.4 7 2 D aspartate 6.2 13 1 E glutamate 12.5 26 5 F phenylalanine 4.8 10 2 G glycine 6.2 13 2 H histidine 0.5 1 1 I isoleucine 1.4 3 1 K lysine 19.2 40 3 L leucine 3.8 8 1 M methionine 2.9 6 1 N asparagine 3.8 8 2 P proline 5.8 12 2 Q glutamine 1.9 4 1 R arginine 3.4 7 1 S serine 6.2 13 2 T threonine 1.9 4 1 V valine 5.3 11 2 W tryptophan 1.0 2 1 Y tyrosine 2.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.995 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.995 PREDICTED: similar to high mobility group box 3 [Ho... HMGB3 0.824 high-mobility group box 3 LOC441795 0.723 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.723 PREDICTED: high mobility group protein B3-like prot... LOC203510 0.684 PREDICTED: similar to hCG1644442 LOC203510 0.684 PREDICTED: similar to hCG1644442 LOC203510 0.684 PREDICTED: hypothetical protein LOC203510 LOC729595 0.681 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.681 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.681 PREDICTED: similar to high mobility group box 3 iso... HMGB1 0.632 high-mobility group box 1 HMGB2 0.613 high-mobility group box 2 HMGB2 0.613 high-mobility group box 2 HMGB2 0.613 high-mobility group box 2 HMGB1L1 0.596 high-mobility group box 1-like 1 LOC729595 0.547 PREDICTED: similar to high mobility group box 3 iso... SP100 0.471 nuclear antigen Sp100 isoform 2 LOC645490 0.458 PREDICTED: similar to hCG1991922 LOC645490 0.458 PREDICTED: similar to hCG1991922 LOC645490 0.451 PREDICTED: similar to hCG1991922 HMGB4 0.245 HMG2 like isoform 1 LOC644129 0.240 PREDICTED: similar to hCG1647425 LOC644129 0.240 PREDICTED: similar to hCG1647425 LOC644129 0.203 PREDICTED: similar to hCG1647425 SSRP1 0.135 structure specific recognition protein 1 HMGB4 0.123 HMG2 like isoform 2 HMG20A 0.100 high-mobility group 20A TOX2 0.098 TOX high mobility group box family member 2 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.