LOC645490 8312

Name: LOC645490	Sequence: fasta or formatted (488aa)		NCBI GI: 169202818
Description: PREDICTED: similar to hCG1991922		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [486aa] PREDICTED: similar to hCG1991922 alt prot [487aa] PREDICTED: similar to hCG1991922
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 36 2 C cysteine 2.9 14 2 D aspartate 6.8 33 2 E glutamate 10.0 49 4 F phenylalanine 4.7 23 2 G glycine 6.8 33 2 H histidine 1.4 7 1 I isoleucine 2.7 13 1 K lysine 11.1 54 4 L leucine 9.0 44 3 M methionine 1.2 6 1 N asparagine 3.5 17 2 P proline 7.2 35 2 Q glutamine 2.7 13 1 R arginine 5.1 25 2 S serine 7.0 34 2 T threonine 2.7 13 1 V valine 3.5 17 2 W tryptophan 1.0 5 1 Y tyrosine 3.5 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1991922 LOC645490 0.993 PREDICTED: similar to hCG1991922 LOC645490 0.983 PREDICTED: similar to hCG1991922 HMGB1 0.308 high-mobility group box 1 HMGB1L1 0.288 high-mobility group box 1-like 1 SP100 0.244 nuclear antigen Sp100 isoform 2 HMGB2 0.237 high-mobility group box 2 HMGB2 0.237 high-mobility group box 2 HMGB2 0.237 high-mobility group box 2 HMGB3 0.202 high-mobility group box 3 LOC646993 0.190 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.190 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.190 PREDICTED: similar to high mobility group box 3 [Ho... LOC441795 0.169 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.169 PREDICTED: high mobility group protein B3-like prot... LOC203510 0.164 PREDICTED: similar to hCG1644442 LOC203510 0.164 PREDICTED: similar to hCG1644442 LOC203510 0.164 PREDICTED: hypothetical protein LOC203510 LOC729595 0.164 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.164 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.164 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.157 PREDICTED: similar to high mobility group box 3 iso... LOC644129 0.156 PREDICTED: similar to hCG1647425 LOC644129 0.156 PREDICTED: similar to hCG1647425 LOC644129 0.143 PREDICTED: similar to hCG1647425 HMGB4 0.088 HMG2 like isoform 1 SSRP1 0.061 structure specific recognition protein 1 TOX 0.058 thymus high mobility group box protein TOX TOX3 0.056 TOX high mobility group box family member 3 isoform... TOX3 0.056 TOX high mobility group box family member 3 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.