Guide to the Human Genome
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Search of human proteins with 149408144

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|149408144 TOX high mobility group box family member 2
isoform a [Homo sapiens]
         (506 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|149408144 TOX high mobility group box family member 2 isoform...  1024   0.0  
gi|149408141 TOX high mobility group box family member 2 isoform...   936   0.0  
gi|14249636 TOX high mobility group box family member 2 isoform ...   936   0.0  
gi|149408146 TOX high mobility group box family member 2 isoform...   893   0.0  
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...   397   e-110
gi|226054295 TOX high mobility group box family member 3 isoform...   296   2e-80
gi|226246533 TOX high mobility group box family member 3 isoform...   287   1e-77
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]      225   8e-59
gi|4504425 high-mobility group box 1 [Homo sapiens]                    80   3e-15
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]           80   3e-15
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]           80   3e-15
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]           80   3e-15
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     79   1e-14
gi|194688135 high-mobility group box 2 [Homo sapiens]                  77   4e-14
gi|194688133 high-mobility group box 2 [Homo sapiens]                  77   4e-14
gi|11321591 high-mobility group box 2 [Homo sapiens]                   77   4e-14
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]             77   4e-14
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]            73   5e-13
gi|71143137 high-mobility group box 3 [Homo sapiens]                   71   3e-12
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...    70   3e-12
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...    70   5e-12
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...    70   5e-12
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...    70   5e-12
gi|83715964 high-mobility group 20B [Homo sapiens]                     68   2e-11
gi|169212060 PREDICTED: high mobility group protein B3-like prot...    66   6e-11
gi|239745831 PREDICTED: high mobility group protein B3-like prot...    66   6e-11
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           66   6e-11
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...    65   1e-10
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...    65   1e-10
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...    65   1e-10

>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score = 1024 bits (2648), Expect = 0.0
 Identities = 506/506 (100%), Positives = 506/506 (100%)

Query: 1   MDVRLYPSAPAVGARPGAEPAGLAHLDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNGQ 60
           MDVRLYPSAPAVGARPGAEPAGLAHLDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNGQ
Sbjct: 1   MDVRLYPSAPAVGARPGAEPAGLAHLDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNGQ 60

Query: 61  SENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMV 120
           SENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMV
Sbjct: 61  SENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMV 120

Query: 121 SNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQM 180
           SNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQM
Sbjct: 121 SNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQM 180

Query: 181 GIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK 240
           GIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK
Sbjct: 181 GIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK 240

Query: 241 KDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 300
           KDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE
Sbjct: 241 KDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 300

Query: 301 AAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSD 360
           AAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSD
Sbjct: 301 AAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSD 360

Query: 361 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPP 420
           LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPP
Sbjct: 361 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPP 420

Query: 421 VSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDW 480
           VSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDW
Sbjct: 421 VSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDW 480

Query: 481 DSSYPSGECGISTCSLLPRDKSLYLT 506
           DSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 481 DSSYPSGECGISTCSLLPRDKSLYLT 506


>gi|149408141 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score =  936 bits (2419), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 43  MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 102
           MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60

Query: 103 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 162
           GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120

Query: 163 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 222
           MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180

Query: 223 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 282
           RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240

Query: 283 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
           MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300

Query: 343 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 402
           KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360

Query: 403 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 462
           HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420

Query: 463 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506
           SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464


>gi|14249636 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score =  936 bits (2419), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 43  MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 102
           MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60

Query: 103 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 162
           GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120

Query: 163 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 222
           MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180

Query: 223 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 282
           RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240

Query: 283 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
           MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300

Query: 343 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 402
           KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360

Query: 403 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 462
           HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420

Query: 463 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506
           SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464


>gi|149408146 TOX high mobility group box family member 2 isoform b
           [Homo sapiens]
          Length = 488

 Score =  893 bits (2307), Expect = 0.0
 Identities = 447/474 (94%), Positives = 447/474 (94%), Gaps = 27/474 (5%)

Query: 33  KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 92
           KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY
Sbjct: 42  KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 101

Query: 93  HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG 152
           HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG
Sbjct: 102 HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG 161

Query: 153 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES 212
           RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES
Sbjct: 162 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES 221

Query: 213 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT 272
           EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT
Sbjct: 222 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT 281

Query: 273 FGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQ 332
           FGDVSKIVASMWDSLGEEQKQ                           SSPDQGETKSTQ
Sbjct: 282 FGDVSKIVASMWDSLGEEQKQ---------------------------SSPDQGETKSTQ 314

Query: 333 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 392
           ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP
Sbjct: 315 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 374

Query: 393 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 452
           PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ
Sbjct: 375 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 434

Query: 453 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506
           DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 435 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score =  397 bits (1020), Expect = e-110
 Identities = 246/544 (45%), Positives = 323/544 (59%), Gaps = 56/544 (10%)

Query: 1   MDVRLYPSAPAVGARPGAEPAGLAH-LDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNG 59
           MDVR YP      A P A   G +  LD Y+  KFDG++ Y+ M++ + + +  SQ+Y G
Sbjct: 1   MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPG 60

Query: 60  QSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIM 119
            S  +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH +  NGLLP +  Q MDLP I 
Sbjct: 61  PSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNGLLPFHP-QNMDLPEIT 119

Query: 120 VSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------GRPGPLLGRPAMLA-SHM 168
           VSNML QD  LLS  +  + ++ + E   Y S          G+P  +  +P M+    +
Sbjct: 120 VSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQL 179

Query: 169 SALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISG-EKRP 224
           + ++QSQL +Q+G+    S++ H+SPSPPGSKSATPSPSSS  E+E +   KI+G EKRP
Sbjct: 180 TTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRP 239

Query: 225 SADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMW 284
           ++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+VSKIVASMW
Sbjct: 240 ASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMW 299

Query: 285 DSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQ 344
           D LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS  +  + K++Q   P +++  K 
Sbjct: 300 DGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQ---PPQLINSKP 356

Query: 345 PMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSKS--------LLPGLSAS 389
            ++  P  A S L  S     + G +P       SL R +  K          +  ++ S
Sbjct: 357 SVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKPNNQMPVTVSIANMAVS 416

Query: 390 PPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAPQPPVLPTPMALQ--VQL 442
           PPPP    +SP LHQ L++  H    +  P     P+ +  A   P +     LQ   Q 
Sbjct: 417 PPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLQPDYQT 474

Query: 443 AMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKS 502
            ++P+    Q      E+  S   C   P  P    DW++ Y S          + RDK+
Sbjct: 475 IINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYCSS-------GGMQRDKA 522

Query: 503 LYLT 506
           LYLT
Sbjct: 523 LYLT 526


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score =  296 bits (759), Expect = 2e-80
 Identities = 205/474 (43%), Positives = 271/474 (57%), Gaps = 59/474 (12%)

Query: 1   MDVRLYPSAPAVGARPGAEPAGLAH---LDYYHGGKFDGDSAYVGMSDGNPELLSTS-QT 56
           MDVR YP+A         +PA L     L YY   KF  ++ Y+ M++ N    + S QT
Sbjct: 1   MDVRFYPAA-------AGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQT 53

Query: 57  YNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNG--LLPAYSYQAMD 114
           ++  S  +E++EIPPITPP   +P+L  + D    + +L   L   G    P +  Q++D
Sbjct: 54  FHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLD 112

Query: 115 LPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY---------------DSGRPGPLL 158
           LP+I +S N++ QD  L S  L   Q   H++V+ Y               D+ R G   
Sbjct: 113 LPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMRSIVHMTDAARSG--- 167

Query: 159 GRPAMLASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVH 215
               M  + ++ ++QSQL +Q+G+    +S+ H+SPSPP SKSATPSPSSS  EE+++  
Sbjct: 168 ---VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEA 224

Query: 216 FKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGD 275
            +  GEKR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+
Sbjct: 225 NRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGE 284

Query: 276 VSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANP 335
           VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAYRASLVSK++ +  E        
Sbjct: 285 VSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAE-------- 336

Query: 336 PAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 392
            A+ +   Q   A   L S L   TP   Q     ASP +L ++L  +S+ P       P
Sbjct: 337 -AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSASPQTLQQSL-PRSIAPKPLTMRLP 393

Query: 393 PPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPAPQPPVLPTPMALQVQLAM 444
                 S T+    ++P +    L+S      +  AP   V P+    Q Q+ +
Sbjct: 394 MNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQL 445


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score =  287 bits (735), Expect = 1e-77
 Identities = 191/438 (43%), Positives = 256/438 (58%), Gaps = 48/438 (10%)

Query: 33  KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 92
           KF  ++ Y+ M++ N    + S+T++  S  +E++EIPPITPP   +P+L  + D    +
Sbjct: 25  KFGNNNNYMNMAEANNAFFAASETFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPF 83

Query: 93  HSLCHGLTPNG--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY 149
            +L   L   G    P +  Q++DLP+I +S N++ QD  L S  L   Q   H++V+ Y
Sbjct: 84  QALSDPLPSQGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQY 141

Query: 150 ---------------DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSP 191
                          D+ R G       M  + ++ ++QSQL +Q+G+    +S+ H+SP
Sbjct: 142 RQDPSLIMRSIVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSP 195

Query: 192 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVS 251
           SPP SKSATPSPSSS  EE+++   +  GEKR + D GKK K PKKKKKKDPNEPQKPVS
Sbjct: 196 SPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVS 255

Query: 252 AYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALA 311
           AYALFFRDTQAAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALA
Sbjct: 256 AYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 315

Query: 312 AYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGA 368
           AYRASLVSK++ +  E         A+ +   Q   A   L S L   TP   Q     A
Sbjct: 316 AYRASLVSKAAAESAE---------AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSA 365

Query: 369 SPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPA 426
           SP +L ++L  +S+ P       P      S T+    ++P +    L+S      +  A
Sbjct: 366 SPQTLQQSL-PRSIAPKPLTMRLPMNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSA 422

Query: 427 PQPPVLPTPMALQVQLAM 444
           P   V P+    Q Q+ +
Sbjct: 423 PSTQVSPSVQTQQHQMQL 440


>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
          Length = 621

 Score =  225 bits (573), Expect = 8e-59
 Identities = 170/479 (35%), Positives = 236/479 (49%), Gaps = 50/479 (10%)

Query: 36  GDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSL 95
           G+  Y+ ++  +   LS ++T++  S  +E++EIPPI+  + P    L + D    +  L
Sbjct: 6   GNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPS---LAVSDVVGHFDDL 62

Query: 96  CH-GLTPNGLLPA-YSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGR 153
                + +G   A Y  Q +D+P  M   ++ Q   LLSG L    ++ HS    Y +  
Sbjct: 63  ADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLT--MDLDHSIGTQYSANP 120

Query: 154 PG----PLLGRPAMLASH--MSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPS 204
           P     P+    + L  H  ++ + QS+L SQ+G+     +I   + SP    S TPSP+
Sbjct: 121 PVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPT 180

Query: 205 SSTQEEESE-VHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAA 263
           SS  E+  E    ++  +K    + GKK K PKK+KKKDPNEPQKPVSAYALFFRDTQAA
Sbjct: 181 SSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAA 240

Query: 264 IKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR-----ASLV 318
           IKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAY+      + V
Sbjct: 241 IKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATV 300

Query: 319 SKSSPDQGETKSTQANPPAKMLPPKQPMYAM---PGLA-SFLTPSDL------QAFRSGA 368
                D      T + PP   + P  P  A    P L+ S +  S L      QA     
Sbjct: 301 ETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLSSYVANQASSGAG 360

Query: 369 SPASLARTLGSKSLLPG------------LSASPPPPPSFPLSPTLHQQLSLPPHAQGAL 416
              ++ + + +K +LP             + A+        L  T     ++ P  Q  +
Sbjct: 361 GQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQT--STATIQPSQQAQI 418

Query: 417 LSPPVSMSPAPQPPV----LPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGP 471
           ++  V  + A         LP P      L   P PP  Q    + + P       P P
Sbjct: 419 VTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPP 477



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 62/195 (31%)

Query: 353 ASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQ--LSLPP 410
           A  +T S LQA  + A+ AS+         LP     PPP    P  PT  Q   L  PP
Sbjct: 416 AQIVTRSVLQAAAAAAAAASMQ--------LPPPRLQPPPLQQMPQPPTQQQVTILQQPP 467

Query: 411 HAQGALLSPP--VSMSPAPQPPVL-----PTPMALQVQLAMSP-----SPPGPQDFP--- 455
             Q     PP  V ++   QPP L     P P  L++Q  + P     SP  P +     
Sbjct: 468 PLQAMQQPPPQKVRINLQQQPPPLQIKSVPLP-TLKMQTTLVPPTVESSPERPMNNSPEA 526

Query: 456 HISEFPSSSGSC----------------------------SPGP--------SNPTSSGD 479
           H  E PS    C                            SP P        + P  S D
Sbjct: 527 HTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKD 586

Query: 480 WDSSYPSGECGISTC 494
           WD+ Y S EC +  C
Sbjct: 587 WDNEYCSNECVVKHC 601


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K   KKK KDPN P++P SA+ LF  + +  IKG++P  + GDV+K +  MW++   + K
Sbjct: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141

Query: 293 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338
           Q Y++K    K++Y K +AAYRA    K  PD  +    +A    K
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRA----KGKPDAAKKGVVKAEKSKK 183



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +P+  +S+YA F +  +   K ++P A+  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357
             +A K  Y + +  Y         P +GETK    +P A    PK+P  A     S   
Sbjct: 63  MAKADKARYEREMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYR 110

Query: 358 PSDLQAFRSGASPASLARTLG 378
           P  ++    G S   +A+ LG
Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K   KKK KDPN P++P SA+ L+F +    IKG+ P  +FGDV+K +  MW++   + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277

Query: 293 QAYKRKTEAAKKEYLKALAAYRA 315
           Q Y++++   K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 246 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 305
           P +P  ++       + A      S  F + SK  +  W ++  ++K  + R      ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198

Query: 306 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 365
             KA  A+    +    P +GETK    +P A    PK+P  A     S   P  ++  R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253

Query: 366 SGASPASLARTLG 378
            G S   +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K   KKK KDPN P++P SA+ L+F +    IKG+ P  +FGDV+K +  MW++   + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277

Query: 293 QAYKRKTEAAKKEYLKALAAYRA 315
           Q Y++++   K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 246 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 305
           P +P  ++       + A      S  F + SK  +  W ++  ++K  + R      ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198

Query: 306 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 365
             KA  A+    +    P +GETK    +P A    PK+P  A     S   P  ++  R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253

Query: 366 SGASPASLARTLG 378
            G S   +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K   KKK KDPN P++P SA+ L+F +    IKG+ P  +FGDV+K +  MW++   + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277

Query: 293 QAYKRKTEAAKKEYLKALAAYRA 315
           Q Y++++   K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 246 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 305
           P +P  ++       + A      S  F + SK  +  W ++  ++K  + R      ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198

Query: 306 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 365
             KA  A+    +    P +GETK    +P A    PK+P  A     S   P  ++  R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253

Query: 366 SGASPASLARTLG 378
            G S   +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 11/135 (8%)

Query: 202 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK-------KDPNEPQKPVSAYA 254
           S SSS+ E +S+   K    KR      K AK+ K +KK       KDPN P++P+SAY 
Sbjct: 500 SASSSSNEGDSDRDEK----KRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYM 555

Query: 255 LFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR 314
           L+   ++  IK  +P  +  D+SK    +W  + +E+K+ + RK E A+++Y KA+  Y 
Sbjct: 556 LWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615

Query: 315 ASLVSKSSPDQGETK 329
                 S  D+ + K
Sbjct: 616 GGRGESSKRDKSKKK 630


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K  KK KKKDPN P++P SA+ LF  + +  IK ++P  + GD +K +  MW     + K
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 293 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 336
           Q Y++K    K++Y K +AAYRA   S   K  P +  T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DPN+P+  +S+YA F +  +   K ++P  S  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
             ++ K  Y + +  Y         P +G+ K  + +P A   PP
Sbjct: 63  MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K  KK KKKDPN P++P SA+ LF  + +  IK ++P  + GD +K +  MW     + K
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 293 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 336
           Q Y++K    K++Y K +AAYRA   S   K  P +  T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DPN+P+  +S+YA F +  +   K ++P  S  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
             ++ K  Y + +  Y         P +G+ K  + +P A   PP
Sbjct: 63  MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K  KK KKKDPN P++P SA+ LF  + +  IK ++P  + GD +K +  MW     + K
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 293 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 336
           Q Y++K    K++Y K +AAYRA   S   K  P +  T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DPN+P+  +S+YA F +  +   K ++P  S  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
             ++ K  Y + +  Y         P +G+ K  + +P A   PP
Sbjct: 63  MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K  KKKK KDPN P++P  A+ LF  + +  IKG++P  +  DV K +A MW++     K
Sbjct: 756 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADK 815

Query: 293 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338
           Q Y++K    K++Y K +AAYRA    K  P+  + +  +A    K
Sbjct: 816 QFYEKKAAKLKEKYKKDIAAYRA----KGKPNSAKKRVVKAEKSKK 857


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292
           K   KKK KDPN P++P SA+ LF  +    IKG++P  + GDV+K +  MW++   + K
Sbjct: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141

Query: 293 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338
           Q  ++K    K++Y K +AAY+A    K  P+  +    +A    K
Sbjct: 142 QPGEKKAAKLKEKYEKDIAAYQA----KGKPEAAKKGVVKAEKSKK 183



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 15/141 (10%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +P+  +S+YA F +  +   K ++  A+  F + S   +  W ++  ++K  ++ 
Sbjct: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357
             +A K  Y + +  Y         P +GETK    +P A    PK+P  A     S   
Sbjct: 63  MAKADKTHYERQMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYH 110

Query: 358 PSDLQAFRSGASPASLARTLG 378
           P  ++    G S   +A+ LG
Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 238 KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKR 297
           KKKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y  
Sbjct: 85  KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144

Query: 298 KTEAAKKEYLKALAAYRA 315
           K    K++Y K +A Y++
Sbjct: 145 KAAKLKEKYEKDVADYKS 162



 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 12/105 (11%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +P+  +SAYA F +  +   K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
             +A K  Y + +  Y         P +G  K    N P +  PP
Sbjct: 63  MAKADKVRYDREMKDY--------GPAKGGKKKKDPNAPKR--PP 97


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 192 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 249
           SP  SK  +    + + +E+S+       +K       ++ K P K  KKKKDP+ P++P
Sbjct: 17  SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73

Query: 250 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKA 309
            S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y  KT   K++Y K 
Sbjct: 74  PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKD 133

Query: 310 LA 311
           +A
Sbjct: 134 VA 135


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129

Query: 288 GEEQKQAYKRKTEAAKKEYLKALA 311
            + +KQ Y  KT   K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 300 EAAK 303
           +  K
Sbjct: 62  KTDK 65


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129

Query: 288 GEEQKQAYKRKTEAAKKEYLKALA 311
            + +KQ Y  KT   K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 300 EAAK 303
           +  K
Sbjct: 62  KTDK 65


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129

Query: 288 GEEQKQAYKRKTEAAKKEYLKALA 311
            + +KQ Y  KT   K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 300 EAAK 303
           +  K
Sbjct: 62  KTDK 65


>gi|83715964 high-mobility group 20B [Homo sapiens]
          Length = 317

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 191 PSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSA--------DPGKKAKNPKKKKKKD 242
           P  PG+ +A     +  Q     V  K    + P A        +P KK   PK KK+K 
Sbjct: 5   PKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGKKRKK 64

Query: 243 --PNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 300
             PN P+ PV+ Y  F  + +  I+ ++P   F +++K++ + W  L   +KQ Y  + E
Sbjct: 65  ILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAE 124

Query: 301 AAKKEYLKALAAYRASLVSKSSPDQGETK 329
             K++Y+K L AY+ S   K   ++ + K
Sbjct: 125 REKQQYMKELRAYQQSEAYKMCTEKIQEK 153


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 196 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 255
           SK  +    + +++E+S+ +     +K       K     K  KKKDPN P++P S + L
Sbjct: 42  SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101

Query: 256 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 315
           F  +     K  NP    GDV+K +  MW +L + +KQ Y  +    K++Y K +A Y++
Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161

Query: 316 SLVSKSSPDQGETKSTQ 332
               KS   +G  K  Q
Sbjct: 162 K--GKSDGAKGPAKVAQ 176



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +P+  +SAYA F +  +   K +NP     F + SK  +  W ++ +++K  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
             +A K  Y + +  Y         P +G  K    +P A   PP
Sbjct: 63  LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 196 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 255
           SK  +    + +++E+S+ +     +K       K     K  KKKDPN P++P S + L
Sbjct: 42  SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101

Query: 256 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 315
           F  +     K  NP    GDV+K +  MW +L + +KQ Y  +    K++Y K +A Y++
Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161

Query: 316 SLVSKSSPDQGETKSTQ 332
               KS   +G  K  Q
Sbjct: 162 K--GKSDGAKGPAKVAQ 176



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +P+  +SAYA F +  +   K +NP     F + SK  +  W ++ +++K  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
             +A K  Y + +  Y         P +G  K    +P A   PP
Sbjct: 63  LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 109/406 (26%), Positives = 155/406 (38%), Gaps = 45/406 (11%)

Query: 87  DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEV 146
           D   S HS    L  NG+  ++  +   L   +  N  + D HL      +    + S  
Sbjct: 79  DSSGSGHSAFEPLVANGVPASFVPKPGSLKRGL--NSQSSDDHL---NKRSRSSSMSSLT 133

Query: 147 AAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS-PSS 205
            AY SG P     R A+ +S+ S    SQL  + G  SS      SP  S+S TP  P+ 
Sbjct: 134 GAYASGIPSS--SRNAITSSYSSTRGISQLWKRNGPSSS---PFSSPASSRSQTPERPAK 188

Query: 206 STQEEESEVHFKISGEKRPSA----DPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQ 261
             +EEE   H   S    P A      G+KA +   +KK++ N    P S+     R  Q
Sbjct: 189 KIREEELCHH---SSSSTPLAADRESQGEKAADTTPRKKQNSNSQSTPGSS-GQRKRKVQ 244

Query: 262 AAIKGQNPSATFGDVSKIVASMW-DSLGEEQK-------QAYKRKTEAAKKEYLKALAAY 313
                +    T     ++  S+  + L  E+K       QA + K++AA     +     
Sbjct: 245 LLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPIT 304

Query: 314 RASLVSKSSPDQGETKSTQANPPAKMLPPK-QPMYAMPGLASFLTPSDLQAFRSGASPAS 372
           + S             +  A+PP  +L P   P+  +  L    TP  L      A  A+
Sbjct: 305 QPSFTFTLPA------AAPASPPTSLLAPSTNPL--LESLKKMQTPPSLPPCPESAGAAT 356

Query: 373 LARTLGSK--SLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ-- 428
                  K  SLLP L  S   PP    SP+     S PP     L+  P SM PA    
Sbjct: 357 TEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFD---SKPPTTLLGLIPAP-SMVPATDTK 412

Query: 429 -PPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSN 473
            PP L    A + Q   +PSP   Q F   ++  S S   +P  S+
Sbjct: 413 APPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASS 458


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141

Query: 296 KRKTEAAKKEYLK 308
             K    K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154



 Score = 34.3 bits (77), Expect = 0.27
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107

Query: 358 PSDLQAFRSGASPASLARTLG 378
           P  +++   G S   +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141

Query: 296 KRKTEAAKKEYLK 308
             K    K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154



 Score = 34.3 bits (77), Expect = 0.27
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107

Query: 358 PSDLQAFRSGASPASLARTLG 378
           P  +++   G S   +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141

Query: 296 KRKTEAAKKEYLK 308
             K    K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154



 Score = 34.3 bits (77), Expect = 0.27
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62

Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107

Query: 358 PSDLQAFRSGASPASLARTLG 378
           P  +++   G S   +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.127    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,240,302
Number of Sequences: 37866
Number of extensions: 1661262
Number of successful extensions: 18646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 1254
Number of HSP's that attempted gapping in prelim test: 11040
Number of HSP's gapped (non-prelim): 5957
length of query: 506
length of database: 18,247,518
effective HSP length: 107
effective length of query: 399
effective length of database: 14,195,856
effective search space: 5664146544
effective search space used: 5664146544
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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