BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|149408144 TOX high mobility group box family member 2 isoform a [Homo sapiens] (506 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|149408144 TOX high mobility group box family member 2 isoform... 1024 0.0 gi|149408141 TOX high mobility group box family member 2 isoform... 936 0.0 gi|14249636 TOX high mobility group box family member 2 isoform ... 936 0.0 gi|149408146 TOX high mobility group box family member 2 isoform... 893 0.0 gi|7662322 thymus high mobility group box protein TOX [Homo sapi... 397 e-110 gi|226054295 TOX high mobility group box family member 3 isoform... 296 2e-80 gi|226246533 TOX high mobility group box family member 3 isoform... 287 1e-77 gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 225 8e-59 gi|4504425 high-mobility group box 1 [Homo sapiens] 80 3e-15 gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 80 3e-15 gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 80 3e-15 gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 80 3e-15 gi|4507241 structure specific recognition protein 1 [Homo sapiens] 79 1e-14 gi|194688135 high-mobility group box 2 [Homo sapiens] 77 4e-14 gi|194688133 high-mobility group box 2 [Homo sapiens] 77 4e-14 gi|11321591 high-mobility group box 2 [Homo sapiens] 77 4e-14 gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 77 4e-14 gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 73 5e-13 gi|71143137 high-mobility group box 3 [Homo sapiens] 71 3e-12 gi|239742753 PREDICTED: similar to high mobility group box 3 iso... 70 3e-12 gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho... 70 5e-12 gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho... 70 5e-12 gi|113416897 PREDICTED: similar to high mobility group box 3 iso... 70 5e-12 gi|83715964 high-mobility group 20B [Homo sapiens] 68 2e-11 gi|169212060 PREDICTED: high mobility group protein B3-like prot... 66 6e-11 gi|239745831 PREDICTED: high mobility group protein B3-like prot... 66 6e-11 gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 66 6e-11 gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 65 1e-10 gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 65 1e-10 gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 65 1e-10 >gi|149408144 TOX high mobility group box family member 2 isoform a [Homo sapiens] Length = 506 Score = 1024 bits (2648), Expect = 0.0 Identities = 506/506 (100%), Positives = 506/506 (100%) Query: 1 MDVRLYPSAPAVGARPGAEPAGLAHLDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNGQ 60 MDVRLYPSAPAVGARPGAEPAGLAHLDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNGQ Sbjct: 1 MDVRLYPSAPAVGARPGAEPAGLAHLDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNGQ 60 Query: 61 SENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMV 120 SENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMV Sbjct: 61 SENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMV 120 Query: 121 SNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQM 180 SNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQM Sbjct: 121 SNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQM 180 Query: 181 GIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK 240 GIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK Sbjct: 181 GIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK 240 Query: 241 KDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 300 KDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE Sbjct: 241 KDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 300 Query: 301 AAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSD 360 AAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSD Sbjct: 301 AAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSD 360 Query: 361 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPP 420 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPP Sbjct: 361 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPP 420 Query: 421 VSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDW 480 VSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDW Sbjct: 421 VSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDW 480 Query: 481 DSSYPSGECGISTCSLLPRDKSLYLT 506 DSSYPSGECGISTCSLLPRDKSLYLT Sbjct: 481 DSSYPSGECGISTCSLLPRDKSLYLT 506 >gi|149408141 TOX high mobility group box family member 2 isoform c [Homo sapiens] Length = 464 Score = 936 bits (2419), Expect = 0.0 Identities = 464/464 (100%), Positives = 464/464 (100%) Query: 43 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 102 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60 Query: 103 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 162 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120 Query: 163 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 222 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180 Query: 223 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 282 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240 Query: 283 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300 Query: 343 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 402 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360 Query: 403 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 462 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420 Query: 463 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464 >gi|14249636 TOX high mobility group box family member 2 isoform c [Homo sapiens] Length = 464 Score = 936 bits (2419), Expect = 0.0 Identities = 464/464 (100%), Positives = 464/464 (100%) Query: 43 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 102 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60 Query: 103 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 162 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120 Query: 163 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 222 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180 Query: 223 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 282 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240 Query: 283 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300 Query: 343 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 402 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360 Query: 403 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 462 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420 Query: 463 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464 >gi|149408146 TOX high mobility group box family member 2 isoform b [Homo sapiens] Length = 488 Score = 893 bits (2307), Expect = 0.0 Identities = 447/474 (94%), Positives = 447/474 (94%), Gaps = 27/474 (5%) Query: 33 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 92 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY Sbjct: 42 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 101 Query: 93 HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG 152 HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG Sbjct: 102 HSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSG 161 Query: 153 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES 212 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES Sbjct: 162 RPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEES 221 Query: 213 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT 272 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT Sbjct: 222 EVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT 281 Query: 273 FGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQ 332 FGDVSKIVASMWDSLGEEQKQ SSPDQGETKSTQ Sbjct: 282 FGDVSKIVASMWDSLGEEQKQ---------------------------SSPDQGETKSTQ 314 Query: 333 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 392 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP Sbjct: 315 ANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 374 Query: 393 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 452 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ Sbjct: 375 PPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQ 434 Query: 453 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT Sbjct: 435 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488 >gi|7662322 thymus high mobility group box protein TOX [Homo sapiens] Length = 526 Score = 397 bits (1020), Expect = e-110 Identities = 246/544 (45%), Positives = 323/544 (59%), Gaps = 56/544 (10%) Query: 1 MDVRLYPSAPAVGARPGAEPAGLAH-LDYYHGGKFDGDSAYVGMSDGNPELLSTSQTYNG 59 MDVR YP A P A G + LD Y+ KFDG++ Y+ M++ + + + SQ+Y G Sbjct: 1 MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPASQSYPG 60 Query: 60 QSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIM 119 S +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH + NGLLP + Q MDLP I Sbjct: 61 PSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNGLLPFHP-QNMDLPEIT 119 Query: 120 VSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------GRPGPLLGRPAMLA-SHM 168 VSNML QD LLS + + ++ + E Y S G+P + +P M+ + Sbjct: 120 VSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQL 179 Query: 169 SALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISG-EKRP 224 + ++QSQL +Q+G+ S++ H+SPSPPGSKSATPSPSSS E+E + KI+G EKRP Sbjct: 180 TTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRP 239 Query: 225 SADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMW 284 ++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+VSKIVASMW Sbjct: 240 ASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMW 299 Query: 285 DSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQ 344 D LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS + + K++Q P +++ K Sbjct: 300 DGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQ---PPQLINSKP 356 Query: 345 PMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSKS--------LLPGLSAS 389 ++ P A S L S + G +P SL R + K + ++ S Sbjct: 357 SVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKPNNQMPVTVSIANMAVS 416 Query: 390 PPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAPQPPVLPTPMALQ--VQL 442 PPPP +SP LHQ L++ H + P P+ + A P + LQ Q Sbjct: 417 PPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLQPDYQT 474 Query: 443 AMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKS 502 ++P+ Q E+ S C P P DW++ Y S + RDK+ Sbjct: 475 IINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYCSS-------GGMQRDKA 522 Query: 503 LYLT 506 LYLT Sbjct: 523 LYLT 526 >gi|226054295 TOX high mobility group box family member 3 isoform 1 [Homo sapiens] Length = 576 Score = 296 bits (759), Expect = 2e-80 Identities = 205/474 (43%), Positives = 271/474 (57%), Gaps = 59/474 (12%) Query: 1 MDVRLYPSAPAVGARPGAEPAGLAH---LDYYHGGKFDGDSAYVGMSDGNPELLSTS-QT 56 MDVR YP+A +PA L L YY KF ++ Y+ M++ N + S QT Sbjct: 1 MDVRFYPAA-------AGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQT 53 Query: 57 YNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPNG--LLPAYSYQAMD 114 ++ S +E++EIPPITPP +P+L + D + +L L G P + Q++D Sbjct: 54 FHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLD 112 Query: 115 LPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY---------------DSGRPGPLL 158 LP+I +S N++ QD L S L Q H++V+ Y D+ R G Sbjct: 113 LPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMRSIVHMTDAARSG--- 167 Query: 159 GRPAMLASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVH 215 M + ++ ++QSQL +Q+G+ +S+ H+SPSPP SKSATPSPSSS EE+++ Sbjct: 168 ---VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEA 224 Query: 216 FKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGD 275 + GEKR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+ Sbjct: 225 NRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGE 284 Query: 276 VSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANP 335 VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAYRASLVSK++ + E Sbjct: 285 VSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAE-------- 336 Query: 336 PAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPP 392 A+ + Q A L S L TP Q ASP +L ++L +S+ P P Sbjct: 337 -AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSASPQTLQQSL-PRSIAPKPLTMRLP 393 Query: 393 PPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPAPQPPVLPTPMALQVQLAM 444 S T+ ++P + L+S + AP V P+ Q Q+ + Sbjct: 394 MNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQL 445 >gi|226246533 TOX high mobility group box family member 3 isoform 2 [Homo sapiens] Length = 571 Score = 287 bits (735), Expect = 1e-77 Identities = 191/438 (43%), Positives = 256/438 (58%), Gaps = 48/438 (10%) Query: 33 KFDGDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASY 92 KF ++ Y+ M++ N + S+T++ S +E++EIPPITPP +P+L + D + Sbjct: 25 KFGNNNNYMNMAEANNAFFAASETFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPF 83 Query: 93 HSLCHGLTPNG--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY 149 +L L G P + Q++DLP+I +S N++ QD L S L Q H++V+ Y Sbjct: 84 QALSDPLPSQGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQY 141 Query: 150 ---------------DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSP 191 D+ R G M + ++ ++QSQL +Q+G+ +S+ H+SP Sbjct: 142 RQDPSLIMRSIVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSP 195 Query: 192 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVS 251 SPP SKSATPSPSSS EE+++ + GEKR + D GKK K PKKKKKKDPNEPQKPVS Sbjct: 196 SPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVS 255 Query: 252 AYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALA 311 AYALFFRDTQAAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALA Sbjct: 256 AYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 315 Query: 312 AYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGA 368 AYRASLVSK++ + E A+ + Q A L S L TP Q A Sbjct: 316 AYRASLVSKAAAESAE---------AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSA 365 Query: 369 SPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPA 426 SP +L ++L +S+ P P S T+ ++P + L+S + A Sbjct: 366 SPQTLQQSL-PRSIAPKPLTMRLPMNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSA 422 Query: 427 PQPPVLPTPMALQVQLAM 444 P V P+ Q Q+ + Sbjct: 423 PSTQVSPSVQTQQHQMQL 440 >gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] Length = 621 Score = 225 bits (573), Expect = 8e-59 Identities = 170/479 (35%), Positives = 236/479 (49%), Gaps = 50/479 (10%) Query: 36 GDSAYVGMSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSL 95 G+ Y+ ++ + LS ++T++ S +E++EIPPI+ + P L + D + L Sbjct: 6 GNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPS---LAVSDVVGHFDDL 62 Query: 96 CH-GLTPNGLLPA-YSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGR 153 + +G A Y Q +D+P M ++ Q LLSG L ++ HS Y + Sbjct: 63 ADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLT--MDLDHSIGTQYSANP 120 Query: 154 PG----PLLGRPAMLASH--MSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPS 204 P P+ + L H ++ + QS+L SQ+G+ +I + SP S TPSP+ Sbjct: 121 PVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPT 180 Query: 205 SSTQEEESE-VHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAA 263 SS E+ E ++ +K + GKK K PKK+KKKDPNEPQKPVSAYALFFRDTQAA Sbjct: 181 SSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAA 240 Query: 264 IKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR-----ASLV 318 IKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAY+ + V Sbjct: 241 IKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATV 300 Query: 319 SKSSPDQGETKSTQANPPAKMLPPKQPMYAM---PGLA-SFLTPSDL------QAFRSGA 368 D T + PP + P P A P L+ S + S L QA Sbjct: 301 ETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLSSYVANQASSGAG 360 Query: 369 SPASLARTLGSKSLLPG------------LSASPPPPPSFPLSPTLHQQLSLPPHAQGAL 416 ++ + + +K +LP + A+ L T ++ P Q + Sbjct: 361 GQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQT--STATIQPSQQAQI 418 Query: 417 LSPPVSMSPAPQPPV----LPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGP 471 ++ V + A LP P L P PP Q + + P P P Sbjct: 419 VTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPP 477 Score = 41.6 bits (96), Expect = 0.002 Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 62/195 (31%) Query: 353 ASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQ--LSLPP 410 A +T S LQA + A+ AS+ LP PPP P PT Q L PP Sbjct: 416 AQIVTRSVLQAAAAAAAAASMQ--------LPPPRLQPPPLQQMPQPPTQQQVTILQQPP 467 Query: 411 HAQGALLSPP--VSMSPAPQPPVL-----PTPMALQVQLAMSP-----SPPGPQDFP--- 455 Q PP V ++ QPP L P P L++Q + P SP P + Sbjct: 468 PLQAMQQPPPQKVRINLQQQPPPLQIKSVPLP-TLKMQTTLVPPTVESSPERPMNNSPEA 526 Query: 456 HISEFPSSSGSC----------------------------SPGP--------SNPTSSGD 479 H E PS C SP P + P S D Sbjct: 527 HTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKD 586 Query: 480 WDSSYPSGECGISTC 494 WD+ Y S EC + C Sbjct: 587 WDNEYCSNECVVKHC 601 >gi|4504425 high-mobility group box 1 [Homo sapiens] Length = 215 Score = 80.5 bits (197), Expect = 3e-15 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 4/106 (3%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KKK KDPN P++P SA+ LF + + IKG++P + GDV+K + MW++ + K Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141 Query: 293 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338 Q Y++K K++Y K +AAYRA K PD + +A K Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRA----KGKPDAAKKGVVKAEKSKK 183 Score = 49.7 bits (117), Expect = 6e-06 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +P+ +S+YA F + + K ++P A+ F + SK + W ++ ++K ++ Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357 +A K Y + + Y P +GETK +P A PK+P A S Sbjct: 63 MAKADKARYEREMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYR 110 Query: 358 PSDLQAFRSGASPASLARTLG 378 P ++ G S +A+ LG Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130 >gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] Length = 488 Score = 80.5 bits (197), Expect = 3e-15 Identities = 36/83 (43%), Positives = 55/83 (66%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277 Query: 293 QAYKRKTEAAKKEYLKALAAYRA 315 Q Y++++ K++Y K +AAYRA Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300 Score = 32.0 bits (71), Expect = 1.4 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%) Query: 246 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 305 P +P ++ + A S F + SK + W ++ ++K + R ++ Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198 Query: 306 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 365 KA A+ + P +GETK +P A PK+P A S P ++ R Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253 Query: 366 SGASPASLARTLG 378 G S +A+ LG Sbjct: 254 PGLSFGDVAKKLG 266 >gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] Length = 487 Score = 80.5 bits (197), Expect = 3e-15 Identities = 36/83 (43%), Positives = 55/83 (66%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277 Query: 293 QAYKRKTEAAKKEYLKALAAYRA 315 Q Y++++ K++Y K +AAYRA Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300 Score = 32.0 bits (71), Expect = 1.4 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%) Query: 246 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 305 P +P ++ + A S F + SK + W ++ ++K + R ++ Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198 Query: 306 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 365 KA A+ + P +GETK +P A PK+P A S P ++ R Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253 Query: 366 SGASPASLARTLG 378 G S +A+ LG Sbjct: 254 PGLSFGDVAKKLG 266 >gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] Length = 486 Score = 80.5 bits (197), Expect = 3e-15 Identities = 36/83 (43%), Positives = 55/83 (66%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277 Query: 293 QAYKRKTEAAKKEYLKALAAYRA 315 Q Y++++ K++Y K +AAYRA Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300 Score = 32.0 bits (71), Expect = 1.4 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%) Query: 246 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 305 P +P ++ + A S F + SK + W ++ ++K + R ++ Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198 Query: 306 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 365 KA A+ + P +GETK +P A PK+P A S P ++ R Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253 Query: 366 SGASPASLARTLG 378 G S +A+ LG Sbjct: 254 PGLSFGDVAKKLG 266 >gi|4507241 structure specific recognition protein 1 [Homo sapiens] Length = 709 Score = 78.6 bits (192), Expect = 1e-14 Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 11/135 (8%) Query: 202 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK-------KDPNEPQKPVSAYA 254 S SSS+ E +S+ K KR K AK+ K +KK KDPN P++P+SAY Sbjct: 500 SASSSSNEGDSDRDEK----KRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYM 555 Query: 255 LFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR 314 L+ ++ IK +P + D+SK +W + +E+K+ + RK E A+++Y KA+ Y Sbjct: 556 LWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615 Query: 315 ASLVSKSSPDQGETK 329 S D+ + K Sbjct: 616 GGRGESSKRDKSKKK 630 >gi|194688135 high-mobility group box 2 [Homo sapiens] Length = 209 Score = 77.0 bits (188), Expect = 4e-14 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KK KKKDPN P++P SA+ LF + + IK ++P + GD +K + MW + K Sbjct: 82 KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141 Query: 293 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 336 Q Y++K K++Y K +AAYRA S K P + T S + N P Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DPN+P+ +S+YA F + + K ++P S F + SK + W ++ ++K ++ Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 ++ K Y + + Y P +G+ K + +P A PP Sbjct: 63 MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99 >gi|194688133 high-mobility group box 2 [Homo sapiens] Length = 209 Score = 77.0 bits (188), Expect = 4e-14 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KK KKKDPN P++P SA+ LF + + IK ++P + GD +K + MW + K Sbjct: 82 KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141 Query: 293 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 336 Q Y++K K++Y K +AAYRA S K P + T S + N P Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DPN+P+ +S+YA F + + K ++P S F + SK + W ++ ++K ++ Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 ++ K Y + + Y P +G+ K + +P A PP Sbjct: 63 MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99 >gi|11321591 high-mobility group box 2 [Homo sapiens] Length = 209 Score = 77.0 bits (188), Expect = 4e-14 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KK KKKDPN P++P SA+ LF + + IK ++P + GD +K + MW + K Sbjct: 82 KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141 Query: 293 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 336 Q Y++K K++Y K +AAYRA S K P + T S + N P Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DPN+P+ +S+YA F + + K ++P S F + SK + W ++ ++K ++ Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 ++ K Y + + Y P +G+ K + +P A PP Sbjct: 63 MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99 >gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] Length = 879 Score = 77.0 bits (188), Expect = 4e-14 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KKKK KDPN P++P A+ LF + + IKG++P + DV K +A MW++ K Sbjct: 756 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADK 815 Query: 293 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338 Q Y++K K++Y K +AAYRA K P+ + + +A K Sbjct: 816 QFYEKKAAKLKEKYKKDIAAYRA----KGKPNSAKKRVVKAEKSKK 857 >gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] Length = 211 Score = 73.2 bits (178), Expect = 5e-13 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 233 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 292 K KKK KDPN P++P SA+ LF + IKG++P + GDV+K + MW++ + K Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141 Query: 293 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 338 Q ++K K++Y K +AAY+A K P+ + +A K Sbjct: 142 QPGEKKAAKLKEKYEKDIAAYQA----KGKPEAAKKGVVKAEKSKK 183 Score = 44.3 bits (103), Expect = 3e-04 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 15/141 (10%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +P+ +S+YA F + + K ++ A+ F + S + W ++ ++K ++ Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357 +A K Y + + Y P +GETK +P A PK+P A S Sbjct: 63 MAKADKTHYERQMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYH 110 Query: 358 PSDLQAFRSGASPASLARTLG 378 P ++ G S +A+ LG Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130 >gi|71143137 high-mobility group box 3 [Homo sapiens] Length = 200 Score = 70.9 bits (172), Expect = 3e-12 Identities = 32/78 (41%), Positives = 49/78 (62%) Query: 238 KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKR 297 KKKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y Sbjct: 85 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144 Query: 298 KTEAAKKEYLKALAAYRA 315 K K++Y K +A Y++ Sbjct: 145 KAAKLKEKYEKDVADYKS 162 Score = 43.1 bits (100), Expect = 6e-04 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 12/105 (11%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +P+ +SAYA F + + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 +A K Y + + Y P +G K N P + PP Sbjct: 63 MAKADKVRYDREMKDY--------GPAKGGKKKKDPNAPKR--PP 97 >gi|239742753 PREDICTED: similar to high mobility group box 3 isoform 2 [Homo sapiens] Length = 183 Score = 70.5 bits (171), Expect = 3e-12 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%) Query: 192 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 249 SP SK + + + +E+S+ +K ++ K P K KKKKDP+ P++P Sbjct: 17 SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73 Query: 250 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKA 309 S + LF + + IK NP + GDV+K + MW++L + +KQ Y KT K++Y K Sbjct: 74 PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKD 133 Query: 310 LA 311 +A Sbjct: 134 VA 135 >gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 204 Score = 70.1 bits (170), Expect = 5e-12 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287 ++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129 Query: 288 GEEQKQAYKRKTEAAKKEYLKALA 311 + +KQ Y KT K++Y K +A Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153 Score = 35.4 bits (80), Expect = 0.12 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299 K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61 Query: 300 EAAK 303 + K Sbjct: 62 KTDK 65 >gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 204 Score = 70.1 bits (170), Expect = 5e-12 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287 ++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129 Query: 288 GEEQKQAYKRKTEAAKKEYLKALA 311 + +KQ Y KT K++Y K +A Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153 Score = 35.4 bits (80), Expect = 0.12 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299 K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61 Query: 300 EAAK 303 + K Sbjct: 62 KTDK 65 >gi|113416897 PREDICTED: similar to high mobility group box 3 isoform 1 [Homo sapiens] Length = 201 Score = 70.1 bits (170), Expect = 5e-12 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%) Query: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287 ++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129 Query: 288 GEEQKQAYKRKTEAAKKEYLKALA 311 + +KQ Y KT K++Y K +A Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153 Score = 35.4 bits (80), Expect = 0.12 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299 K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61 Query: 300 EAAK 303 + K Sbjct: 62 KTDK 65 >gi|83715964 high-mobility group 20B [Homo sapiens] Length = 317 Score = 67.8 bits (164), Expect = 2e-11 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%) Query: 191 PSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSA--------DPGKKAKNPKKKKKKD 242 P PG+ +A + Q V K + P A +P KK PK KK+K Sbjct: 5 PKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGKKRKK 64 Query: 243 --PNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 300 PN P+ PV+ Y F + + I+ ++P F +++K++ + W L +KQ Y + E Sbjct: 65 ILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAE 124 Query: 301 AAKKEYLKALAAYRASLVSKSSPDQGETK 329 K++Y+K L AY+ S K ++ + K Sbjct: 125 REKQQYMKELRAYQQSEAYKMCTEKIQEK 153 >gi|169212060 PREDICTED: high mobility group protein B3-like protein-like [Homo sapiens] Length = 207 Score = 66.2 bits (160), Expect = 6e-11 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%) Query: 196 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 255 SK + + +++E+S+ + +K K K KKKDPN P++P S + L Sbjct: 42 SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101 Query: 256 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 315 F + K NP GDV+K + MW +L + +KQ Y + K++Y K +A Y++ Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161 Query: 316 SLVSKSSPDQGETKSTQ 332 KS +G K Q Sbjct: 162 K--GKSDGAKGPAKVAQ 176 Score = 41.6 bits (96), Expect = 0.002 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +P+ +SAYA F + + K +NP F + SK + W ++ +++K + Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 +A K Y + + Y P +G K +P A PP Sbjct: 63 LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96 >gi|239745831 PREDICTED: high mobility group protein B3-like protein-like [Homo sapiens] Length = 207 Score = 66.2 bits (160), Expect = 6e-11 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%) Query: 196 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 255 SK + + +++E+S+ + +K K K KKKDPN P++P S + L Sbjct: 42 SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101 Query: 256 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 315 F + K NP GDV+K + MW +L + +KQ Y + K++Y K +A Y++ Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161 Query: 316 SLVSKSSPDQGETKSTQ 332 KS +G K Q Sbjct: 162 K--GKSDGAKGPAKVAQ 176 Score = 41.6 bits (96), Expect = 0.002 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +P+ +SAYA F + + K +NP F + SK + W ++ +++K + Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342 +A K Y + + Y P +G K +P A PP Sbjct: 63 LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96 >gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] Length = 984 Score = 66.2 bits (160), Expect = 6e-11 Identities = 109/406 (26%), Positives = 155/406 (38%), Gaps = 45/406 (11%) Query: 87 DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEV 146 D S HS L NG+ ++ + L + N + D HL + + S Sbjct: 79 DSSGSGHSAFEPLVANGVPASFVPKPGSLKRGL--NSQSSDDHL---NKRSRSSSMSSLT 133 Query: 147 AAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS-PSS 205 AY SG P R A+ +S+ S SQL + G SS SP S+S TP P+ Sbjct: 134 GAYASGIPSS--SRNAITSSYSSTRGISQLWKRNGPSSS---PFSSPASSRSQTPERPAK 188 Query: 206 STQEEESEVHFKISGEKRPSA----DPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQ 261 +EEE H S P A G+KA + +KK++ N P S+ R Q Sbjct: 189 KIREEELCHH---SSSSTPLAADRESQGEKAADTTPRKKQNSNSQSTPGSS-GQRKRKVQ 244 Query: 262 AAIKGQNPSATFGDVSKIVASMW-DSLGEEQK-------QAYKRKTEAAKKEYLKALAAY 313 + T ++ S+ + L E+K QA + K++AA + Sbjct: 245 LLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPIT 304 Query: 314 RASLVSKSSPDQGETKSTQANPPAKMLPPK-QPMYAMPGLASFLTPSDLQAFRSGASPAS 372 + S + A+PP +L P P+ + L TP L A A+ Sbjct: 305 QPSFTFTLPA------AAPASPPTSLLAPSTNPL--LESLKKMQTPPSLPPCPESAGAAT 356 Query: 373 LARTLGSK--SLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ-- 428 K SLLP L S PP SP+ S PP L+ P SM PA Sbjct: 357 TEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFD---SKPPTTLLGLIPAP-SMVPATDTK 412 Query: 429 -PPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSN 473 PP L A + Q +PSP Q F ++ S S +P S+ Sbjct: 413 APPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASS 458 >gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 208 Score = 65.5 bits (158), Expect = 1e-10 Identities = 30/73 (41%), Positives = 44/73 (60%) Query: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295 K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141 Query: 296 KRKTEAAKKEYLK 308 K K++Y K Sbjct: 142 VTKAAKLKEKYEK 154 Score = 34.3 bits (77), Expect = 0.27 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +PQ +SAYA + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357 +A + Y + D G K + P PK+P S Sbjct: 63 MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107 Query: 358 PSDLQAFRSGASPASLARTLG 378 P +++ G S +A+ LG Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127 >gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 208 Score = 65.5 bits (158), Expect = 1e-10 Identities = 30/73 (41%), Positives = 44/73 (60%) Query: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295 K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141 Query: 296 KRKTEAAKKEYLK 308 K K++Y K Sbjct: 142 VTKAAKLKEKYEK 154 Score = 34.3 bits (77), Expect = 0.27 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +PQ +SAYA + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357 +A + Y + D G K + P PK+P S Sbjct: 63 MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107 Query: 358 PSDLQAFRSGASPASLARTLG 378 P +++ G S +A+ LG Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127 >gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 208 Score = 65.5 bits (158), Expect = 1e-10 Identities = 30/73 (41%), Positives = 44/73 (60%) Query: 236 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 295 K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141 Query: 296 KRKTEAAKKEYLK 308 K K++Y K Sbjct: 142 VTKAAKLKEKYEK 154 Score = 34.3 bits (77), Expect = 0.27 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 297 K DP +PQ +SAYA + K +NP F + SK + W ++ ++K + Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62 Query: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357 +A + Y + D G K + P PK+P S Sbjct: 63 MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107 Query: 358 PSDLQAFRSGASPASLARTLG 378 P +++ G S +A+ LG Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.309 0.127 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,240,302 Number of Sequences: 37866 Number of extensions: 1661262 Number of successful extensions: 18646 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 383 Number of HSP's successfully gapped in prelim test: 1254 Number of HSP's that attempted gapping in prelim test: 11040 Number of HSP's gapped (non-prelim): 5957 length of query: 506 length of database: 18,247,518 effective HSP length: 107 effective length of query: 399 effective length of database: 14,195,856 effective search space: 5664146544 effective search space used: 5664146544 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.