HMGB2 11138

Name: HMGB2	Sequence: fasta or formatted (209aa)		NCBI GI: 194688133
Description: high-mobility group box 2		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt mRNA [209aa] high-mobility group box 2 alt mRNA [209aa] high-mobility group box 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 15 2 C cysteine 1.4 3 1 D aspartate 7.2 15 1 E glutamate 15.8 33 8 F phenylalanine 3.8 8 2 G glycine 6.2 13 1 H histidine 1.9 4 1 I isoleucine 1.4 3 1 K lysine 19.1 40 3 L leucine 1.9 4 1 M methionine 2.9 6 1 N asparagine 2.4 5 1 P proline 7.2 15 2 Q glutamine 1.9 4 1 R arginine 4.3 9 1 S serine 8.1 17 2 T threonine 1.9 4 1 V valine 1.4 3 1 W tryptophan 1.0 2 1 Y tyrosine 2.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 high-mobility group box 2 HMGB2 1.000 high-mobility group box 2 HMGB2 1.000 high-mobility group box 2 HMGB1 0.820 high-mobility group box 1 HMGB1L1 0.769 high-mobility group box 1-like 1 HMGB3 0.689 high-mobility group box 3 LOC646993 0.608 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.608 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.608 PREDICTED: similar to high mobility group box 3 [Ho... LOC441795 0.603 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.603 PREDICTED: high mobility group protein B3-like prot... SP100 0.584 nuclear antigen Sp100 isoform 2 LOC203510 0.577 PREDICTED: similar to hCG1644442 LOC203510 0.577 PREDICTED: similar to hCG1644442 LOC203510 0.577 PREDICTED: hypothetical protein LOC203510 LOC645490 0.569 PREDICTED: similar to hCG1991922 LOC645490 0.569 PREDICTED: similar to hCG1991922 LOC645490 0.564 PREDICTED: similar to hCG1991922 LOC729595 0.552 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.552 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.552 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.414 PREDICTED: similar to high mobility group box 3 iso... HMGB4 0.328 HMG2 like isoform 1 LOC644129 0.314 PREDICTED: similar to hCG1647425 LOC644129 0.314 PREDICTED: similar to hCG1647425 LOC644129 0.253 PREDICTED: similar to hCG1647425 SSRP1 0.165 structure specific recognition protein 1 HMGB4 0.153 HMG2 like isoform 2 UBTF 0.131 upstream binding transcription factor, RNA polymera... UBTF 0.131 upstream binding transcription factor, RNA polymera... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.