Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ULBP3 Sequence: fasta or formatted (244aa) NCBI GI: 13375656
Description:

UL16 binding protein 3

Referenced in:

HLA and Related Proteins
Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         19           4
 C cysteine            2.5          6           1
 D aspartate           5.7         14           1
 E glutamate           5.3         13           2
 F phenylalanine       5.3         13           2
 G glycine             6.1         15           1
 H histidine           2.5          6           1
 I isoleucine          4.1         10           2
 K lysine              5.3         13           2
 L leucine            12.3         30           2
 M methionine          3.7          9           1
 N asparagine          1.6          4           2
 P proline             5.3         13           2
 Q glutamine           4.5         11           2
 R arginine            6.6         16           2
 S serine              7.0         17           1
 T threonine           5.3         13           2
 V valine              3.3          8           2
 W tryptophan          3.7          9           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UL16 binding protein 3 
ULBP1                 0.497   UL16 binding protein 1 
RAET1G                0.462   retinoic acid early transcript 1G 
RAET1L                0.449   retinoic acid early transcript 1L 
ULBP2                 0.445   UL16 binding protein 2 
RAET1E                0.274   retinoic acid early transcript 1E 
MR1                   0.107   major histocompatibility complex, class I-related [Ho...
HLA-A                 0.091   major histocompatibility complex, class I, A precurs...
HLA-E                 0.082   major histocompatibility complex, class I, E precurs...
HLA-B                 0.074   major histocompatibility complex, class I, B precurs...
MICB                  0.072   MHC class I polypeptide-related sequence B 
AZGP1                 0.068   alpha-2-glycoprotein 1, zinc 
LOC652614             0.062   PREDICTED: similar to MHC class I antigen 
FCGRT                 0.060   Fc fragment of IgG, receptor, transporter, alpha [H...
FCGRT                 0.060   Fc fragment of IgG, receptor, transporter, alpha [Hom...
MICA                  0.060   MHC class I polypeptide-related sequence A 
HLA-C                 0.058   major histocompatibility complex, class I, C precurs...
HLA-G                 0.056   major histocompatibility complex, class I, G precurso...
HFE                   0.054   hemochromatosis protein isoform 1 precursor 
HFE                   0.047   hemochromatosis protein isoform 6 precursor 
HLA-F                 0.045   major histocompatibility complex, class I, F isofor...
HLA-F                 0.045   major histocompatibility complex, class I, F isofor...
HFE                   0.045   hemochromatosis protein isoform 9 precursor 
HFE                   0.045   hemochromatosis protein isoform 7 precursor 
HFE                   0.039   hemochromatosis protein isoform 8 precursor 
HLA-F                 0.039   major histocompatibility complex, class I, F isofor...
CD1A                  0.014   CD1A antigen precursor 
NOTCH4                0.010   notch4 preproprotein 
NUMBL                 0.010   numb homolog (Drosophila)-like 
CD1C                  0.008   CD1C antigen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press