SDF4 36190

Name: SDF4	Sequence: fasta or formatted (348aa)		NCBI GI: 7706573
Description: stromal cell derived factor 4 isoform 1 precursor		Referenced in: Calmodulin and Calcium
Other entries for this name: alt prot [362aa] stromal cell derived factor 4 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 25 2 C cysteine 0.9 3 2 D aspartate 7.8 27 2 E glutamate 10.6 37 3 F phenylalanine 3.7 13 1 G glycine 6.0 21 3 H histidine 3.4 12 1 I isoleucine 3.4 12 1 K lysine 5.7 20 2 L leucine 10.6 37 3 M methionine 2.9 10 1 N asparagine 3.7 13 1 P proline 5.2 18 2 Q glutamine 3.2 11 2 R arginine 6.3 22 2 S serine 5.2 18 2 T threonine 4.0 14 1 V valine 6.9 24 1 W tryptophan 2.6 9 1 Y tyrosine 0.6 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 stromal cell derived factor 4 isoform 1 precursor [Ho... SDF4 0.871 stromal cell derived factor 4 isoform 2 precursor [H... CALU 0.100 calumenin isoform b precursor CALU 0.097 calumenin isoform a precursor RCN1 0.090 reticulocalbin 1 precursor RCN2 0.086 reticulocalbin 2 precursor RCN3 0.084 reticulocalbin 3, EF-hand calcium binding domain [Ho... CETN1 0.022 centrin 1 CALML5 0.020 calmodulin-like 5 CALM3 0.020 calmodulin 3 CALM2 0.020 calmodulin 2 CALM1 0.020 calmodulin 1 TNNC1 0.017 troponin C, slow NECAB2 0.017 neuronal calcium-binding protein 2 SLC25A23 0.017 solute carrier family 25, member 23 EFCAB4B 0.015 EF-hand calcium binding domain 4B isoform c EFCAB4B 0.015 EF-hand calcium binding domain 4B isoform b EFCAB4B 0.015 EF-hand calcium binding domain 4B isoform a PLCD4 0.015 phospholipase C, delta 4 CETN2 0.015 caltractin HLA-F 0.015 major histocompatibility complex, class I, F isofor... HLA-F 0.015 major histocompatibility complex, class I, F isofor... CALML3 0.015 calmodulin-like 3 NEXN 0.015 nexilin (F actin binding protein) TNNC2 0.013 fast skeletal muscle troponin C CETN3 0.013 centrin 3 CABP4 0.012 calcium binding protein 4 SLC25A24 0.012 solute carrier family 25 member 24 isoform 1 SLC25A24 0.012 solute carrier family 25 member 24 isoform 2 CABP1 0.012 calcium binding protein 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.