SDF4 9992

Name: SDF4	Sequence: fasta or formatted (362aa)		NCBI GI: 18699732
Description: stromal cell derived factor 4 isoform 2 precursor		Referenced in: Calmodulin and Calcium
Other entries for this name: alt prot [348aa] stromal cell derived factor 4 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 24 1 C cysteine 0.6 2 2 D aspartate 8.3 30 2 E glutamate 12.4 45 3 F phenylalanine 4.1 15 2 G glycine 5.0 18 2 H histidine 3.9 14 2 I isoleucine 3.3 12 1 K lysine 6.1 22 2 L leucine 9.4 34 3 M methionine 3.6 13 1 N asparagine 4.4 16 1 P proline 4.1 15 2 Q glutamine 3.3 12 2 R arginine 5.5 20 2 S serine 5.8 21 2 T threonine 2.5 9 1 V valine 7.2 26 1 W tryptophan 2.2 8 1 Y tyrosine 1.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 stromal cell derived factor 4 isoform 2 precursor [H... SDF4 0.837 stromal cell derived factor 4 isoform 1 precursor [Ho... CALU 0.135 calumenin isoform b precursor CALU 0.133 calumenin isoform a precursor RCN2 0.124 reticulocalbin 2 precursor RCN1 0.123 reticulocalbin 1 precursor RCN3 0.105 reticulocalbin 3, EF-hand calcium binding domain [Ho... CALML3 0.022 calmodulin-like 3 CETN1 0.021 centrin 1 CALML5 0.020 calmodulin-like 5 CALM3 0.020 calmodulin 3 CALM2 0.020 calmodulin 2 CALM1 0.020 calmodulin 1 TNNC2 0.020 fast skeletal muscle troponin C PLCH1 0.020 phospholipase C eta 1 isoform c PLCH1 0.020 phospholipase C eta 1 isoform a PLCH1 0.020 phospholipase C eta 1 isoform b TNNC1 0.017 troponin C, slow NECAB2 0.017 neuronal calcium-binding protein 2 SLC25A23 0.017 solute carrier family 25, member 23 NEXN 0.017 nexilin (F actin binding protein) SLC25A24 0.017 solute carrier family 25 member 24 isoform 2 EFCAB4B 0.014 EF-hand calcium binding domain 4B isoform c EFCAB4B 0.014 EF-hand calcium binding domain 4B isoform b EFCAB4B 0.014 EF-hand calcium binding domain 4B isoform a PLCD4 0.014 phospholipase C, delta 4 CETN2 0.014 caltractin HLA-F 0.014 major histocompatibility complex, class I, F isofor... HLA-F 0.014 major histocompatibility complex, class I, F isofor... CETN3 0.013 centrin 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.