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Search of human proteins with 148762978
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148762978 similar to CG15216-PA [Homo sapiens]
(976 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148762978 similar to CG15216-PA [Homo sapiens] 2034 0.0
gi|163965366 nascent polypeptide-associated complex alpha subuni... 75 4e-13
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 62 3e-09
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 61 6e-09
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 56 2e-07
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 55 4e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 4e-06
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 52 4e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 52 4e-06
gi|118402590 myosin XV [Homo sapiens] 51 6e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 49 2e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 48 4e-05
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 48 4e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 5e-05
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 47 7e-05
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 47 7e-05
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 47 9e-05
gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo ... 47 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 1e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 1e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 1e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 47 1e-04
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 47 1e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 46 1e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 46 1e-04
gi|188536004 zinc finger protein 469 [Homo sapiens] 46 1e-04
gi|40353727 synaptopodin isoform A [Homo sapiens] 46 1e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 1e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 1e-04
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 46 2e-04
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 2034 bits (5270), Expect = 0.0
Identities = 976/976 (100%), Positives = 976/976 (100%)
Query: 1 MTRTDPPDLLVSTVYQDIKVATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALD 60
MTRTDPPDLLVSTVYQDIKVATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALD
Sbjct: 1 MTRTDPPDLLVSTVYQDIKVATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALD 60
Query: 61 GPAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREA 120
GPAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREA
Sbjct: 61 GPAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREA 120
Query: 121 QRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP 180
QRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP
Sbjct: 121 QRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP 180
Query: 181 APHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPT 240
APHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPT
Sbjct: 181 APHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPT 240
Query: 241 PSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGP 300
PSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGP
Sbjct: 241 PSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGP 300
Query: 301 TFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRY 360
TFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRY
Sbjct: 301 TFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRY 360
Query: 361 VPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDP 420
VPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDP
Sbjct: 361 VPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDP 420
Query: 421 DPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREP 480
DPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREP
Sbjct: 421 DPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREP 480
Query: 481 RGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDL 540
RGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDL
Sbjct: 481 RGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDL 540
Query: 541 RATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASE 600
RATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASE
Sbjct: 541 RATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASE 600
Query: 601 PAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSADED 660
PAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSADED
Sbjct: 601 PAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSADED 660
Query: 661 DLMTCSNARCRRTETMFNACLYFKSCHSCYTYYCSRLCRREDWDAHKARCVYGRVGSVCR 720
DLMTCSNARCRRTETMFNACLYFKSCHSCYTYYCSRLCRREDWDAHKARCVYGRVGSVCR
Sbjct: 661 DLMTCSNARCRRTETMFNACLYFKSCHSCYTYYCSRLCRREDWDAHKARCVYGRVGSVCR 720
Query: 721 HVLQFCRDSGPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYL 780
HVLQFCRDSGPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYL
Sbjct: 721 HVLQFCRDSGPVHRAFSRIARVGFLSRGRGVLFLGFPSPGSADNFLRFGLEGLLLSPTYL 780
Query: 781 SLRELATHAAPLGSYARELAAAGRLYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSH 840
SLRELATHAAPLGSYARELAAAGRLYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSH
Sbjct: 781 SLRELATHAAPLGSYARELAAAGRLYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSH 840
Query: 841 GPTVRKFAKVALAAGSPARPPPARSREPDMETLILTPPPGTAGLDQDGEAGRRAREVAFI 900
GPTVRKFAKVALAAGSPARPPPARSREPDMETLILTPPPGTAGLDQDGEAGRRAREVAFI
Sbjct: 841 GPTVRKFAKVALAAGSPARPPPARSREPDMETLILTPPPGTAGLDQDGEAGRRAREVAFI 900
Query: 901 HIQRELRLRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASEP 960
HIQRELRLRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASEP
Sbjct: 901 HIQRELRLRGVFLRHEFPRVYEQLCEFVEANRRFTPTTIYPTDRRTGRPFMCMIMAASEP 960
Query: 961 RALDWVASANLLDDIM 976
RALDWVASANLLDDIM
Sbjct: 961 RALDWVASANLLDDIM 976
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 74.7 bits (182), Expect = 4e-13
Identities = 151/646 (23%), Positives = 196/646 (30%), Gaps = 150/646 (23%)
Query: 35 SVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESA-VPRART----------R 83
+++ P P + S F + D PA P PP P+ A P A T
Sbjct: 823 NLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPP 882
Query: 84 EAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALA 143
+ P + P+ P TPAP P L + + ARA +P+ PA P+ +
Sbjct: 883 KETPTPSVVNLPFPKEGPA-TPAPKQAPALSMTS-SSPKKARATPAPKGIPASPSPKGAP 940
Query: 144 NELHPIKLQPQ-RGGPGRVAPLCAAAGRCA-PPEPPAGPAPHVRCRLDIKPDDAVLQHAT 201
P P +GGP +P A A PP P GPA
Sbjct: 941 TP--PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPA-------------------- 978
Query: 202 RGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGP 261
S PT A A P G P P+ PTP P+ P P
Sbjct: 979 TPSPKGAPTPPA--ATPPSPKGGPATPSPK-----GAPTPPAVTPPSPKGSPAATPFP-- 1029
Query: 262 RDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPR 321
+ P TPP P +GS AA+P P P GP+
Sbjct: 1030 ---KGASTPPAATPPSP------------KGSPAATPLPKGAPTTPAATLPSPKGGPATP 1074
Query: 322 RMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGR 381
+ G T P PPS P G P P P P+
Sbjct: 1075 SLKG-----APTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG------------- 1116
Query: 382 YRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVP----PSDPDPLLASWHGGTGTSPPR 437
T PH + A P P L P P+ P S GG T PP+
Sbjct: 1117 -------LATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Query: 438 LATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRG--VSPEGRRPPVVVN 495
A + P P +G G P+G +P P
Sbjct: 1170 GAPTT--------------PAATPPSPKG-------GLATPSPKGAPTTPAATPPSPKGG 1208
Query: 496 LSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPG 555
L+T + A + + T + KG GL T + A P+A G
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKG----GLA-----------TPSPKGAPTTPAATPPSPKG 1253
Query: 556 GRTRPPPHAAPDGPTS------GRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQ 609
G PPP AP P + G + +V P G A+ P
Sbjct: 1254 GPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP-------- 1305
Query: 610 LRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEP 655
P G+ P A P SP S G+ AP A P P
Sbjct: 1306 --------PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSP 1343
Score = 71.6 bits (174), Expect = 3e-12
Identities = 151/672 (22%), Positives = 207/672 (30%), Gaps = 160/672 (23%)
Query: 21 ATPGPASKCSPCERSVARP----AEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESA 76
ATP P +P + P A P+P + P T P P +A
Sbjct: 978 ATPSPKGAPTPPAATPPSPKGGPATPSP------------KGAPTPPAVTPPSPKGSPAA 1025
Query: 77 VPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAY 136
P + P A + +P+ P TP P P P A SP+ PA
Sbjct: 1026 TPFPKGASTPP---AATPPSPKGSPAATPLPKGAPTTP---------AATLPSPKGGPAT 1073
Query: 137 PALRALANELHPIKLQPQ-RGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDA 195
P+L+ P P +GGP +P A P PPA P + L P
Sbjct: 1074 PSLKGAPTP--PAATPPSPKGGPATPSPKGA-------PMPPAATPPSPKGGLATPPHKG 1124
Query: 196 VLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCD 255
PT A A P GL P P+ + TP P+
Sbjct: 1125 A------------PTTPA--ATPPSPKGGLATPPPKGAPTTPAATPPS-----PKGGLAT 1165
Query: 256 GPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEEL 315
P G + P TPP P T P+G + AA+P P P L
Sbjct: 1166 PPPKGAP------TTPAATPPSPKGGLATPSPKGAPTTPAATP----------PSPKGGL 1209
Query: 316 SGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFY 375
+ PSP+ T P PPS P G P P P P+ P
Sbjct: 1210 ATPSPKG--------APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPP-- 1259
Query: 376 TEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSD--PDPLLA---SWHGG 430
P+ +P P + PP P+P + S GG
Sbjct: 1260 -------------------PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG 1300
Query: 431 TGTSPPRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRP 490
TSPP+ A P P +G P P+G
Sbjct: 1301 PATSPPKGAPTP--------------PAATPPSPKG------------SPGTPPPKGAPT 1334
Query: 491 PVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARA 550
P V T P +L T+ + KG + P T + A PS +
Sbjct: 1335 PPAV---TPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPK- 1390
Query: 551 WELPGGRTRPPPHAAPDG-PTSGRQRSLEQLDELITDLVID--SRPTAGQASEPAADCLG 607
R P +P G PTS L T + + + P+ G + PA +
Sbjct: 1391 --------RGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVS 1442
Query: 608 PQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSADEDDLMTCSN 667
L++ APA + P+ PA+ S +P P + EP A + + S
Sbjct: 1443 --LKK----------APATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP 1490
Query: 668 ARCRRTETMFNA 679
+ T A
Sbjct: 1491 KKAPATPAPMGA 1502
Score = 62.8 bits (151), Expect = 2e-09
Identities = 147/637 (23%), Positives = 196/637 (30%), Gaps = 120/637 (18%)
Query: 21 ATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRA 80
ATP P +P PA P K + F + P T P P +A P
Sbjct: 1001 ATPSPKGAPTP-------PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP 1053
Query: 81 RTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALR 140
+ P S A P L AP P P + + A SP+ P PA
Sbjct: 1054 KGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP----PSPKGGPATPSPKGAPMPPAAT 1109
Query: 141 ALANELHPIKLQPQRGGPGRVA--PLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQ 198
+ + P +G P A P G P PP G AP P +
Sbjct: 1110 P-PSPKGGLATPPHKGAPTTPAATPPSPKGGLATP--PPKG-APTTPAATPPSPKGGLAT 1165
Query: 199 HATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPL 258
+G+ PT A A P GL P P+ + TP P+
Sbjct: 1166 PPPKGA----PTTPA--ATPPSPKGGLATPSPKGAPTTPAATP-----PSPKGGLA---T 1211
Query: 259 PGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGP 318
P P+ + P TPP P T P+G + AA+P P P + P
Sbjct: 1212 PSPKG---APTTPAATPPSPKGGLATPSPKGAPTTPAATP----------PSPKGGPATP 1258
Query: 319 SPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTED 378
P+ T P PPS P G P P P+ P
Sbjct: 1259 PPK--------GAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP----- 1305
Query: 379 FGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDPDPLLASWHGGTGTSPPRL 438
A T P P+ SP P+ T V P P GT T P
Sbjct: 1306 --PKGAPTPPAATPPSPKGSPGTPP--PKGAPTPPAVTPPSPK--------GTPTL-PAT 1352
Query: 439 ATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLST 498
S+ + + P P P +G P P +R P + +
Sbjct: 1353 TPSSKGGPTTPSSKEGPTPPAATPSHKG------------GPAMTPPSPKRGPAIPSPKG 1400
Query: 499 SPRRYAALSLS-----ETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWEL 553
P A + LS T +T +G A G +TP +T L+ SA
Sbjct: 1401 DPTSPAVIPLSPKKAPATPVTREGAATPSKGD---LTPP-AVTPVSLKKAPATSA----- 1451
Query: 554 PGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRL 613
P P P+S +L V P A + A P +
Sbjct: 1452 --------PKGGPATPSSKGDPTL--------PAVTPPSPKEPPAPKQVATSSSP---KK 1492
Query: 614 LDSRPAGSGAPAL-----APPRSPPASAGSAEEPAAP 645
+ PA GAP L + P+ PA+ S +P AP
Sbjct: 1493 APATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAP 1529
Score = 47.0 bits (110), Expect = 9e-05
Identities = 112/482 (23%), Positives = 152/482 (31%), Gaps = 70/482 (14%)
Query: 66 TLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAAR 125
TLP P P + + P A + S P P+P P +P + A
Sbjct: 1348 TLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAV 1407
Query: 126 AEASPRREPAYPALRALANELHPIKLQPQRGG--PGRVAP--LCAAAGRCAPPEPPAGPA 181
SP++ PA P R A P +G P V P L A AP PA P+
Sbjct: 1408 IPLSPKKAPATPVTREGA-------ATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPS 1460
Query: 182 PHVRCRLDI------KPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMAL 235
L K A Q AT S P A AP + P+ +
Sbjct: 1461 SKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMG--APTLPAVIPSSPKE--V 1516
Query: 236 SRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGS-- 293
TP+ A P A P E P T P P + P+ +
Sbjct: 1517 PATPSSRRDPIA-PTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPS 1575
Query: 294 ---FAASPGPTFDAYYPRPYPSEEL-----SGPSPRRMGGYYAGEVRTFPIQEPPSRSYY 345
++ P T Y P P E L + PSP+ E T P PPS
Sbjct: 1576 SKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPK--------EAPTPPAVTPPSPEKG 1627
Query: 346 GEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGR---YRERDVLAR----------TY 392
P G P P P + T+ T G + + A+
Sbjct: 1628 PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Query: 393 PHPRSSP---AWADWGPRPYRTLQVVPPSDPDPLLASWHGG---TGTSPPRL-------- 438
P P S+P A GP+ ++ PP PDP + G T P L
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSK 1747
Query: 439 ATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLST 498
+ S S LAP + ++E +L + +P PPV + L+
Sbjct: 1748 TAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPS---PPVSLPLAP 1804
Query: 499 SP 500
SP
Sbjct: 1805 SP 1806
Score = 32.7 bits (73), Expect = 1.7
Identities = 51/217 (23%), Positives = 74/217 (34%), Gaps = 48/217 (22%)
Query: 56 LEALDGPAM--ETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAP----------PGL 103
L A GP E L P P + + A TR+ +++ + S P P P
Sbjct: 1672 LPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLS 1731
Query: 104 TPAPASPPVLP--------RRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQR 155
T APA P+LP +G++A + + +P A L A A E
Sbjct: 1732 TVAPA--PLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFE---------- 1779
Query: 156 GGPGRVAPLCAAAGRCAPPEPPA------GPAPHVRCRLDIKPDD--AVLQHATRGSRSC 207
+V P +A A P PP P P + + P VL+ ++
Sbjct: 1780 ----KVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPA 1835
Query: 208 GPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDS 244
E P P G+ P L PTP +
Sbjct: 1836 DEDELLPLIPPEPISGGV----PFQSVLVNMPTPKSA 1868
Score = 30.4 bits (67), Expect = 8.4
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Query: 825 APPGTPALPAPAPRSH-GPTVRKF-------AKVALAAGSPARPPPARSREP 868
+P GTP LPA P S GPT A G PA PP+ R P
Sbjct: 1342 SPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGP 1393
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 62.0 bits (149), Expect = 3e-09
Identities = 170/677 (25%), Positives = 231/677 (34%), Gaps = 119/677 (17%)
Query: 30 SPCERSVARPAEPAPFNKRHC----------------RSFDFLEALDGPAMETLPEP--P 71
SP R+ +R PAP K + + L P E +PEP P
Sbjct: 200 SPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEP 259
Query: 72 PPESAVPRARTRE-AEPRRRARSKSAPRAPPGLTPAPA-SPPVLPRRGREAQRAARAEAS 129
PE + + +E PR R+RSKS R + +P+ + P R R + R S
Sbjct: 260 SPEKNSKKEKEKEKTRPRSRSRSKSRSRT---RSRSPSHTRPRRRHRSRSRSYSPRRRPS 316
Query: 130 PRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLD 189
PRR P+ P R + P P R R +P+ A + + R R
Sbjct: 317 PRRRPS-PRRRTPPRRMPP----PPRHRRSR-SPVRRRRRSSASLSGSSSSSSSSRSRSP 370
Query: 190 IKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDS-YCAD 248
K R +R P+ + R P P RH +PTP S
Sbjct: 371 PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRH-----SPTPQQSNRTRK 425
Query: 249 PRAFYCDGPLPG---PRDYAERRSLPFTTP-PGPTQFFYTEEPQGFRGSFAASPGPTFDA 304
R G G E+R P P P + +EE +G G AA+
Sbjct: 426 SRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKG--GKMAAADSVQQRR 483
Query: 305 YYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYY--GEAPRAYGLPYGPRYVP 362
Y R +++ S S G + E E P RS+ GE R
Sbjct: 484 QYRR--QNQQSSSDS----GSSSSSE------DERPKRSHVKNGEVGRR----------- 520
Query: 363 EEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDPDP 422
R HS +R R +E R R SP+ P P R + P+ P
Sbjct: 521 ---RRHSPSRSASPSPRKRQKETSPRGRR----RRSPS-----PPPTRRRRSPSPAPPPR 568
Query: 423 LLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRR-EDPLGRGRSYENLLGREVREP- 480
T T PPR T S R +P PRR P+ R S R P
Sbjct: 569 -----RRRTPTPPPRRRTPSPPPRRR-----SPSPRRYSPPIQRRYSPSPPPKRRTASPP 618
Query: 481 ----RGVSPEGRRPPVVVNLSTSP----RRYAALSLSETSLTEKGRAGEGLGRNWYVTPE 532
R SP PP +S SP R SL+ K R G R+ T E
Sbjct: 619 PPPKRRASPS---PPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS---TRE 672
Query: 533 ITITDNDLRATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSR 592
+ R + P RA P + PPP + R++S I + SR
Sbjct: 673 ARSPQPNKRHSPSPRPRA---PQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRV---SR 726
Query: 593 PTAGQASEPAADCLGPQLRRLLDSRP-AGSGAPALAPPRSPPASAGSAE-----EPAAPG 646
+ + AA +RR+ SR +GS PA P +PP+ S PA P
Sbjct: 727 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPV 786
Query: 647 EAADA---SPEPSADED 660
+ A + SP P + D
Sbjct: 787 KKAKSPTPSPSPPRNSD 803
Score = 50.4 bits (119), Expect = 8e-06
Identities = 132/527 (25%), Positives = 173/527 (32%), Gaps = 140/527 (26%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRART 82
P P + SP R+ R P P RH RS S V R R
Sbjct: 315 PSPRRRPSPRRRTPPRRMPPPP---RHRRS---------------------RSPVRRRRR 350
Query: 83 REA------EPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRR--EP 134
A +RS+S P+ PP T +SPP R+ +R + + + PRR P
Sbjct: 351 SSASLSGSSSSSSSSRSRSPPKKPPKRT---SSPP------RKTRRLSPSASPPRRRHRP 401
Query: 135 AYPALRALANELHPIKLQPQRG-------GPGRVAPLCAAAGRCAPPEPPAGPAPHVRCR 187
+ PA P Q R PGR + E P+ PAP
Sbjct: 402 SPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPS-PAP----- 455
Query: 188 LDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCA 247
KP L + G AA + Q+ R S + + S S
Sbjct: 456 ---KPRKVELSESEEDKG--GKMAAADSVQQRRQYR-------RQNQQSSSDSGSSSSSE 503
Query: 248 D---PRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDA 304
D R+ +G + R ++ RS P P + P+G R + SP PT
Sbjct: 504 DERPKRSHVKNGEVGRRRRHSPSRS----ASPSPRKRQKETSPRG-RRRRSPSPPPTRRR 558
Query: 305 YYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEE 364
P P P PRR R P P RS +PR Y P RY P
Sbjct: 559 RSPSP-------APPPRRRRTPTPPPRRRTPSPPPRRRS---PSPRRYSPPIQRRYSPSP 608
Query: 365 PRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPP----SDP 420
P TA P P R+SP+ P P R + PP S P
Sbjct: 609 PPKRRTASP----------------PPPPKRRASPS-----PPPKRRVSHSPPPKQRSSP 647
Query: 421 -----DPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGP-RREDPLGRGRSYENLLG 474
P L+S H G+SP R ++R +P P +R P R
Sbjct: 648 VTKRRSPSLSSKH-RKGSSPSRSTREAR----------SPQPNKRHSPSPR--------- 687
Query: 475 REVREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGE 521
PR PPV S+SP+R + S S + R E
Sbjct: 688 -----PRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE 729
Score = 33.1 bits (74), Expect = 1.3
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Query: 826 PPGTPALPAPAPRSHGPTVRKFAKVALAAGSPARPPPARSREPDMETLILTPPP 879
PP P+P PR P+ R+++ SP+ PP R+ P PPP
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP--------PPP 620
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 60.8 bits (146), Expect = 6e-09
Identities = 148/629 (23%), Positives = 203/629 (32%), Gaps = 110/629 (17%)
Query: 62 PAMETLPEPPPPESA--VPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGRE 119
P E P PPPE++ P A P A S P L+P P P+ P E
Sbjct: 451 PPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSP--PPE 508
Query: 120 AQRAARAEASPRREP-AYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPA 178
+ + E SP P P AL L P P +PL P E P
Sbjct: 509 SSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSP-----PPEELPT 563
Query: 179 GPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARP-------APQFHGLTVPGPR 231
P P RL P+++ + S P EA+ P P P P
Sbjct: 564 SPPPEA-SRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPE 622
Query: 232 HMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTT--PPGPTQFFYTEEPQG 289
LS P P DS + P + P+ P + + LP + P P + + P+
Sbjct: 623 ASRLS--PPPEDSPMSPPPE---ESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPE- 676
Query: 290 FRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGE-- 347
SP P P P S P + + P++E P E
Sbjct: 677 ---ESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQ 733
Query: 348 -APRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGP 406
PR+ G PR PEEP H + RP PH P
Sbjct: 734 LCPRSEGPHLSPR--PEEP--HLSPRP-----------------EEPHLSPQAEEPHLSP 772
Query: 407 RPYRTLQVVPPSDPDPLLASWHGGTGTSPP------RLATDSRHYSR-SWDNILAP---- 455
+P P +P L+ G SP T+ H S + L+P
Sbjct: 773 QPEEPCLCAVPEEPH--LSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEE 830
Query: 456 ---GPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAALS----- 507
P+ E+P R E+ L E+ +P +SP +PP +P
Sbjct: 831 SHLSPQSEEPCLSPRPEESHLSPELEKP-PLSPRPEKPPEEPGQCPAPEELPLFPPPGEP 889
Query: 508 -----LSETSLTEKGRAGEGLGRNWYVTPEITITDND--LRATERPSARAWELPGGRTRP 560
L E +L+E G P ++ + L + PS +P P
Sbjct: 890 SLSPLLGEPALSEPGE------------PPLSPLPEELPLSPSGEPSLSPQLMP-----P 932
Query: 561 PPHAAPDGP--TSGRQRSLEQLDELITDLVIDSRPTAGQA-SEPAADCLGPQLRRLLDSR 617
P P P T+ +L L EL P + S+P + P L +
Sbjct: 933 DPLPPPLSPIITAAAPPALSPLGEL-------EYPFGAKGDSDPESPLAAPILETPISPP 985
Query: 618 P-AGSGAPALAPPRSPPASAGSAEEPAAP 645
P A P PP P S GS PA+P
Sbjct: 986 PEANCTDPEPVPPMILPPSPGSPVGPASP 1014
Score = 52.8 bits (125), Expect = 2e-06
Identities = 109/470 (23%), Positives = 152/470 (32%), Gaps = 90/470 (19%)
Query: 38 RPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRARTREA-EPRRRARSKSA 96
+P+ P PF K C S D L + P + P S P +R+A E ++ S+
Sbjct: 2237 QPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASS 2296
Query: 97 PR-APPGL------------------TPAPASPPVLPRRGREAQRAARAEASPRREPAYP 137
P PP L TP P+ PR + ++ P+ P
Sbjct: 2297 PSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQ 2356
Query: 138 ALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPE-----PPAGPAPHVRCRLDIKP 192
AL A + HP +P P + PPE PP R+ P
Sbjct: 2357 AL-APSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASP 2415
Query: 193 DDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAF 252
Q +++ + P A + P+P P P SR P+ S DP A
Sbjct: 2416 QS---QSSSQSPLTPRPLSAEAFC-PSPVTPRFQSPDP----YSRPPSRPQS--RDPFAP 2465
Query: 253 YCDGPLPGPRDYAERR-----------SLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPT 301
P P P + A + P P GP + + P G +F SPG
Sbjct: 2466 LHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVPSGQPPNFVRSPGT- 2524
Query: 302 FDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPS--RSYYGEAPRAYGLPYGPR 359
A+ P P + P+ +G P PP S++G P G P
Sbjct: 2525 -GAFVGTPSP---MRFTFPQAVGEPSLKPPVPQPGLPPPHGINSHFGPGP-TLGKPQSTN 2579
Query: 360 YVPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSD 419
Y H + P P S +G P R V+PP
Sbjct: 2580 YTVATGNFHPSGSPL-------------------GPSSGSTGESYGLSPLRPPSVLPPPA 2620
Query: 420 PDPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDP-LGRGRS 468
PD L P L+ H + I +P +REDP G G S
Sbjct: 2621 PDGSL-----------PYLS----HGASQRSGITSPVEKREDPGTGMGSS 2655
Score = 52.4 bits (124), Expect = 2e-06
Identities = 169/714 (23%), Positives = 229/714 (32%), Gaps = 142/714 (19%)
Query: 6 PPDLLVSTVYQDIKVATPGPASKCSPC--ERSVARPAEPAPFNKRHCRSFDFLEALDGPA 63
P +L S + + + ++ P S SP E ++ P E +PF+
Sbjct: 471 PEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSP---------------- 514
Query: 64 METLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTP----APASPPVLPRRGRE 119
+E P PP ES A P A S P L+P P SPP P R
Sbjct: 515 LEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPP--PEASRL 572
Query: 120 AQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLC--AAAGRCAPP--- 174
+ + SP E + + A+ L P + P +PL A R +PP
Sbjct: 573 SPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPED 632
Query: 175 --------EPPAGPAPHVR--------CRLDIKPDDAVLQHATRGSRSCGPTEAAHWARP 218
E P P P V RL P+++ L S + P EA+ + P
Sbjct: 633 SPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLS-P 691
Query: 219 APQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTP--- 275
P+ T P P S P P DS + P PLP R P +P
Sbjct: 692 PPE-DSPTSPPPEDSPAS--PPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPE 748
Query: 276 -----PGPTQFFYTEEPQGFRGSFAASP-GPTFDAYYPRPYPSEELSGP--SPRRMGGYY 327
P P + + PQ + P P A P+ S + GP SP+
Sbjct: 749 EPHLSPRPEEPHLS--PQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQ------ 800
Query: 328 AGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDV 387
E+ P E P S E P P P+ + RP E+
Sbjct: 801 PEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRP-EESHLSPELEKPP 859
Query: 388 LARTYPHPRSSPAWADWGPRPYRTLQVVPPSDP--DPLLASWHGGTGTSPPRLATDSRHY 445
L+ P P P P P PP +P PLL PP
Sbjct: 860 LS---PRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPP--------- 907
Query: 446 SRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAA 505
L+P P E PL G P+ + P+ PP+ SP AA
Sbjct: 908 -------LSPLP-EELPLSPS-------GEPSLSPQLMPPDPLPPPL------SPIITAA 946
Query: 506 LSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAA 565
+ +L+ G G PE + +A E P PPP A
Sbjct: 947 ---APPALSPLGELEYPFGAKGDSDPESPL-----------AAPILETP---ISPPPEAN 989
Query: 566 PDGPTSGRQRSLEQLDELITDLVIDSRP--TAGQASEPAADCLGPQLRRLLDSRPAGSGA 623
P E + +++ P G AS + L PQ LL S
Sbjct: 990 CTDP------------EPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQH----SLV 1033
Query: 624 PALAPPR--SPPASAGSAEEPAAP-GEAADASPEPSADEDDLMTCSNARCRRTE 674
P +PP SPPA S P +P G+ S E E + S C E
Sbjct: 1034 PQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALE 1087
Score = 40.4 bits (93), Expect = 0.008
Identities = 85/369 (23%), Positives = 123/369 (33%), Gaps = 77/369 (20%)
Query: 60 DGPAMETLPEPPPPESAVPR------ARTREAEPRRRARSKSAPRAPPGLTP------AP 107
D P L PP + VP A EPR P APP P AP
Sbjct: 2154 DSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPR-------FPTAPPTYPPYPSPTGAP 2206
Query: 108 ASPPVL-----PRRGREAQRAARAEASPRREPAY--PALRALANELHPIKLQPQRGGPGR 160
A PP+L P G+ + +PR +P+ P L+ L + + P+ G G
Sbjct: 2207 AQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAV-PESPGVG- 2264
Query: 161 VAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAP 220
G+ + P P R L++K ++ S S GP P+
Sbjct: 2265 -------GGKASEPLLSPPPFGESRKALEVKKEE-----LGASSPSYGPPNLGFVDSPSS 2312
Query: 221 QFH--GLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPG----PRDYAERRSLPFTT 274
H GL + P T PRA + PG P++ ++L +
Sbjct: 2313 GTHLGGLELKTPDVFKAPLT----------PRASQVEPQSPGLGLRPQEPPPAQALAPSP 2362
Query: 275 PPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTF 334
P P F P + +A P P+P P E PR + V
Sbjct: 2363 PSHPDIF----RPGSYTDPYAQPPLTP----RPQPPPPESCCALPPRSLPSDPFSRVPAS 2414
Query: 335 PIQEPPSRSYYGEAPRAYGL----PYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLAR 390
P + S+S P + P PR+ +P + +RP + RD A
Sbjct: 2415 PQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP---------QSRDPFAP 2465
Query: 391 TYPHPRSSP 399
+ PR P
Sbjct: 2466 LHKPPRPQP 2474
Score = 33.5 bits (75), Expect = 1.00
Identities = 29/90 (32%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
Query: 805 LYEPAECFLLSVSVAVGPGTAPPGT-PALPAPAPRSHGPTVRKFAKVALAAGSPARPPPA 863
L P E LS P + PP P P P P + SP PPP
Sbjct: 536 LSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPE 595
Query: 864 RSRE-PDMETLILTPPPGTAGLDQDGEAGR 892
SR P E L+PPP + L EA R
Sbjct: 596 ASRLFPPFEESPLSPPPEESPLSPPPEASR 625
Score = 32.3 bits (72), Expect = 2.2
Identities = 91/389 (23%), Positives = 133/389 (34%), Gaps = 55/389 (14%)
Query: 291 RGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPR 350
RG+F + PT YY + LS P T P PP+ +
Sbjct: 4592 RGAFGSGALPTGPDYYSQLLTKNNLSNPP-------------TPPSSLPPTPPPSVQQKM 4638
Query: 351 AYGLPYGPRYVPEEPRAHSTARPF--YTEDFGRYRERDVLAR--TYPHPRSSPAWADWGP 406
G+ + E P+ ++AR D + D+LA T PH ++ +
Sbjct: 4639 VNGVTPSEE-LGEHPKDAASARDSERALRDTSEVKSLDLLAALPTPPHNQTEDVRMESDE 4697
Query: 407 RPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPG----PRREDP 462
+VP S P+ +L G PR D L+P PR P
Sbjct: 4698 DSDSPDSIVPASSPESIL-------GEEAPRFPHLGSGRWEQEDRALSPVIPLIPRASIP 4750
Query: 463 LGRGRSYENLLGREV--REPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAG 520
+ LG EV + P +G+ V V L+ S AA +L+ +
Sbjct: 4751 VFPDTKPYGALGLEVPGKLPVTTWEKGKGSEVSVMLTVSAA--AAKNLNGVMVA----VA 4804
Query: 521 EGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPD-GPTSGRQRSLEQ 579
E L + E+ ++ RA P E PGG+ + +PD GP L+Q
Sbjct: 4805 ELLSMKIPNSYEVLFPESPARAGTEPKKGEAEGPGGKEKGLEGKSPDTGPD-----WLKQ 4859
Query: 580 LDELITDLVIDSR-------PTAGQASEPAADCLGPQLRRLLDSRPAGSGAP-ALAPPRS 631
D ++ + S+ A EP LD R + P +PP S
Sbjct: 4860 FDAVLPGYTLKSQLDILSLLKQESPAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPPS 4919
Query: 632 P--PASAGSAEEPAA--PGEAADASPEPS 656
P P+ A EP P E P PS
Sbjct: 4920 PLAPSPASPPTEPLVELPTEPLAEPPVPS 4948
Score = 31.6 bits (70), Expect = 3.8
Identities = 31/121 (25%), Positives = 41/121 (33%), Gaps = 19/121 (15%)
Query: 61 GPAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREA 120
GPA L EP PP+ + P+ S+ +P A P P+P SP +
Sbjct: 1010 GPASPILMEPLPPQCS--PLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDE 1067
Query: 121 QRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP 180
E EP PAL P +PL + G + P P P
Sbjct: 1068 AELHEMETEKVSEPECPALE-----------------PSATSPLPSPMGDLSCPAPSPAP 1110
Query: 181 A 181
A
Sbjct: 1111 A 1111
Score = 30.4 bits (67), Expect = 8.4
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 68 PEPPPPESAVPRARTREAEPRRRARSKSAPRAPPG-LTPAPASPPVLPRRGREAQRAARA 126
PEPP S + + A P PP L P+PASPP P
Sbjct: 4886 PEPPTQHSYTYNVSNLDVR-QLSAPPPEEPSPPPSPLAPSPASPPTEP--------LVEL 4936
Query: 127 EASPRREPAYPALRALANELHPIKLQPQRGGP 158
P EP P+ LA+ + +P+ P
Sbjct: 4937 PTEPLAEPPVPSPLPLASSPESARPKPRARPP 4968
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 55.8 bits (133), Expect = 2e-07
Identities = 128/503 (25%), Positives = 165/503 (32%), Gaps = 106/503 (21%)
Query: 224 GLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFY 283
GL R P+ + + P F D G Y P P +
Sbjct: 106 GLEQESGRSSGFYEDPSSTGGPDSPPSTFCGDSGFSGSSSYGR------LGPSEPRGIYA 159
Query: 284 TEEPQGFRGSFAASPGPT-FDAYYPR----PYPSEELSGPSPRRMGGYYAGEVRTFPIQE 338
+E P+ + ++P A PR PYP+ G + R P
Sbjct: 160 SERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTA--GGSAGPEACSSAERRARAGPFLT 217
Query: 339 P-PSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPF--YTEDFGRYRERDVLARTYPHP 395
P P + +PR G P + P A RP Y R R R R P
Sbjct: 218 PSPLHAVAMRSPRPCGRP-----PTDSPDAGGAGRPLDGYISALLRRRRR----RGAGQP 268
Query: 396 RSSPAWADWGPRPYRTLQVVPP-SDPDPLLA--------SWHGGTGTSPPRLATDSRHYS 446
R+SP AD GPR +++ PP + P P A GG TSP L SR ++
Sbjct: 269 RTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAAL---SRAWA 325
Query: 447 RSWDNILAPGP----------------------------------------RREDPLGRG 466
SW++ AP P R+ PL RG
Sbjct: 326 SSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRG 385
Query: 467 RSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRN 526
RS E RE PR GR + R A+ S SETSL + A G
Sbjct: 386 RSVEQSPPRE--RPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPS-GPP 442
Query: 527 WYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPDGPTSGRQ-RSLEQLDELIT 585
Y T E R RP P R P P A S R+ RS ++D
Sbjct: 443 KYPTAE--------REEPRP-------PRPRRGPAPTLAAQAAGSCRRWRSTAEID-AAD 486
Query: 586 DLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGS--GAPALAP-PRSPPASA-----G 637
+ R A + P PQ R L + S A L P R PA G
Sbjct: 487 GRRVRPRAPAARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRGPAGGVGGGYG 546
Query: 638 SAEEPAAPGEAADASPEPSADED 660
+E A+ GE + A S+D D
Sbjct: 547 ESESSASEGE-SPAFSSASSDSD 568
Score = 39.7 bits (91), Expect = 0.014
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 28/133 (21%)
Query: 61 GPAMETLPEPPPPESAVPRARTREAEPRR---RARSKSAPRAPPGL----TPAPASPPVL 113
G ++E P P +A R R EA RR RAR S ++ L + P+ PP
Sbjct: 385 GRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKY 444
Query: 114 PRRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGR----VAPLCAAAG 169
P RE R R PRR PA P L A Q G R A + AA G
Sbjct: 445 PTAEREEPRPPR----PRRGPA-PTLAA------------QAAGSCRRWRSTAEIDAADG 487
Query: 170 RCAPPEPPAGPAP 182
R P PA P
Sbjct: 488 RRVRPRAPAARVP 500
Score = 37.7 bits (86), Expect = 0.053
Identities = 68/258 (26%), Positives = 91/258 (35%), Gaps = 75/258 (29%)
Query: 22 TPGPASKCSPCERSVA-RP--AEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVP 78
+PG A + SV RP A P+P + R R P++E + P +A+
Sbjct: 271 SPGGADGGPRRQNSVRQRPPDASPSPGSARPARE---------PSLERVGGHPTSPAALS 321
Query: 79 RARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGR--EAQRAARAEASPR----- 131
RA E S++AP P PA SPP P GR +AQ A+A+ R
Sbjct: 322 RAWASSWE------SEAAPE--PAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGR 373
Query: 132 --REPAYPALRALANELHPIKLQPQRGG-PGRVA--------PLCAAAGRC--------- 171
R P R + E P + +P+ G GR+A P A R
Sbjct: 374 AARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGR 433
Query: 172 -------------------APPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEA 212
PP P GPAP + A + R RS +A
Sbjct: 434 ASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLA---------AQAAGSCRRWRSTAEIDA 484
Query: 213 AHWARPAPQFHGLTVPGP 230
A R P+ VPGP
Sbjct: 485 ADGRRVRPRAPAARVPGP 502
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 54.7 bits (130), Expect = 4e-07
Identities = 72/261 (27%), Positives = 98/261 (37%), Gaps = 38/261 (14%)
Query: 68 PEPPPPESAVPRARTREAEPRRRAR---SKSAPRAPPGLTPAPASPPVLPRRGREAQRAA 124
P P P++ +A R R + S ++PR PG A+ V P G+ + +
Sbjct: 111 PGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTS 170
Query: 125 RAEASPRREPAYPALRALANELHPIKL---------QPQRGGPGRVAPLCAAAGRCAPPE 175
A+AS R P L + L P++L P GPGR+ + + PP
Sbjct: 171 LAQAS--RSGTVPGLPPAS--LQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPL 226
Query: 176 PPA------GPAPHVRCRLDIKPDDAVLQHAT--RGSRSCGPTEAAHWARPAPQFHGLTV 227
PP P P VR RL + L+ A RGSR+ A R A LT+
Sbjct: 227 PPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTL 286
Query: 228 PGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEP 287
A P S+ A RAF PLP P + SLP G +P
Sbjct: 287 TPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVP--SLPSPQAQGQA----VRQP 340
Query: 288 QGFRGSFA--------ASPGP 300
+ R + A SPGP
Sbjct: 341 RLLRAALALGAPRGRTPSPGP 361
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 51.6 bits (122), Expect = 4e-06
Identities = 78/313 (24%), Positives = 105/313 (33%), Gaps = 49/313 (15%)
Query: 66 TLPEPPPPESAVPRARTREAEPRRRARSKSA---PRAPPGLTPAPASPPVLPRRGREAQR 122
T P PP A P + + P S SA P+APP L P P + A
Sbjct: 465 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA 524
Query: 123 AARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP-- 180
+A P ++P +A + + + P P + P+ AA PP PPA P
Sbjct: 525 TPPLQALPSPPASFPG-QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL 583
Query: 181 -APH-------------VRCRLDIKPDDAVLQHATRGSRSCGPTEAAHW--ARPAPQFHG 224
AP R L + P + S GP A H A P+
Sbjct: 584 QAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 643
Query: 225 LTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPP-------- 276
GP A + P ++ P A + GP P P + P PP
Sbjct: 644 GYDSGPEGGAAASPPPDAELAACHPAA-WSRGPAP-PLAFRGAPGAPLPWPPATGPGSAD 701
Query: 277 GPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPI 336
G + TE P+ +A+P P A P GPSP GG A
Sbjct: 702 GLCTIYETEGPE------SATPAP--GALDP---------GPSPGTSGGKAAAGAGAGAS 744
Query: 337 QEPPSRSYYGEAP 349
P ++ GE P
Sbjct: 745 SRSPKQARLGELP 757
Score = 51.2 bits (121), Expect = 5e-06
Identities = 161/699 (23%), Positives = 216/699 (30%), Gaps = 139/699 (19%)
Query: 19 KVATPGPASKCSPCERSVARPAEPAPFNKRHCR-----SFDFLEALDGPAMETLPEPPPP 73
K +PGP S SP S P P ++ R + +A + P L
Sbjct: 107 KNTSPGPVS--SPGRASGT--TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 74 ESAVPRARTREAEPRRRARSKSA----PRAPPGLTPAPASPPVLPRRG-REAQRAARAEA 128
+++ P T RR+R+ PR P P P P PR+ A + E
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP--PTEGPRKSVSSASEHSTTEP 220
Query: 129 SP--RREPAY------PALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP 180
SP RR P+ PA R+L++ P+ P R GP +A G P P+ P
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSATPLS-SPARSGP-------SARGTPRAPAHPSQP 272
Query: 181 APHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPT 240
P L V + + GP ++ A P+P + L TP
Sbjct: 273 KPK---GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP---SAALQSQAPPTLPATPH 326
Query: 241 PSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGP 300
S C P P + P TPP + + P
Sbjct: 327 SSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQ--------------ATTSLGSP 372
Query: 301 TFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRY 360
T A + PS LS P+ PP +AP A LP P
Sbjct: 373 TLQATHSF-LPSPPLS------------------PLATPPP-----QAPPALALP--PLQ 406
Query: 361 VPEEPRAHSTARPFYTEDFGRYRERDV--LARTYPHPRSSPAWADWGP--RPYRTLQVVP 416
P P A P T V L + P S P A + P P + P
Sbjct: 407 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 466
Query: 417 PSDPDPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGRE 476
PS P LA +PP S S P P+ PL +
Sbjct: 467 PSQAPPSLA--------APPLQVPPSPPASPPMSPSATPPPQAPPPLAAP-------PLQ 511
Query: 477 VREPRGVSPEGRRPPVVVNLSTSPRRY---------AALSLSETSLTEKGRAGEGLGRNW 527
+ +P +P P + L + P + A+L +S + T +A L
Sbjct: 512 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA-TPPPQAPPVLAAPL 570
Query: 528 YVTPEITITDNDLRATERPSARAWELPGGRTR----------PPPHAAPDGPTSGRQRSL 577
P L+A RP + R PPP +P SG +
Sbjct: 571 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAG 630
Query: 578 EQLDELITDLVI---DSRPTAGQASEPAADCLGPQLRRLLDSR-PA-------GSGAPAL 626
T + DS P G A+ P D SR PA GAP
Sbjct: 631 HSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 690
Query: 627 APPRSPPASA----------GSAEEPAAPGEAADASPEP 655
PP + P SA G APG A D P P
Sbjct: 691 WPPATGPGSADGLCTIYETEGPESATPAPG-ALDPGPSP 728
Score = 45.1 bits (105), Expect = 3e-04
Identities = 66/262 (25%), Positives = 90/262 (34%), Gaps = 37/262 (14%)
Query: 406 PRPYRTLQVVPPSDPDPL-LASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLG 464
PRP + + PP P L + G G P R I PR
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKP----LAERAGGIGGATIPESAPRAGPTRS 82
Query: 465 RGRSYENLLGREVREPRGVSPEGRRPPVVVNLS----TSPRRYAA-----------LSLS 509
G S N R RG R P N S +SP R + L +S
Sbjct: 83 AGTSSRNPASRPPASGRG-----ERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 137
Query: 510 ETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPS----ARAWELPGGRTRPPPHAA 565
+G+A E R+ T T P+ +RA G RP P A
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 566 PDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPA 625
P PT G ++S+ E T + P+ P+A G L+R + S P
Sbjct: 198 PRPPTEGPRKSVSSASEHST-----TEPSPAARRRPSA---GGGLQRPASRSLSSSATPL 249
Query: 626 LAPPRSPPASAGSAEEPAAPGE 647
+P RS P++ G+ PA P +
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQ 271
Score = 38.9 bits (89), Expect = 0.024
Identities = 95/377 (25%), Positives = 126/377 (33%), Gaps = 83/377 (22%)
Query: 311 PSEELSGPSPRRMGGYYAGEVRTFPI---------QEPPSRSYYGEAPRAYGLPYGPRYV 361
P + + P P G +G R P+ +E +R EAP+ L G R
Sbjct: 104 PPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Query: 362 PEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWG-PRPYRTLQVVPPSD- 419
P T P +AR RS A + G PRP + + PP++
Sbjct: 164 TSGPTP-GTPSP-------------AMAR-----RSRAAGTEVGLPRPAPSARPRPPTEG 204
Query: 420 --PDPLLASWHGGTGTSPPRLATDS------RHYSRSWDNILAP--GPRREDPLGRGRSY 469
AS H T SP S R SRS + P P R P RG
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTP- 263
Query: 470 ENLLGREVREPRGVSPEGR---RPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRN 526
R P P+G RPP V T PR+ AA +L S +
Sbjct: 264 -----RAPAHPSQPKPKGLQALRPPQV----TPPRKDAAPALGPLSSSPLATPSPSAALQ 314
Query: 527 WYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITD 586
P + T + T A LP PP +AP SL+ L
Sbjct: 315 SQAPPTLPATPHSSSLT---CQLATPLP---LAPPSPSAPP--------SLQTLPS---- 356
Query: 587 LVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAP-ALAPPRSPPASA-----GSAE 640
P A S+ P L+ P+ +P A PP++PPA A
Sbjct: 357 ------PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPS 410
Query: 641 EPAAPGEAADASPEPSA 657
PA+P + A+P P A
Sbjct: 411 PPASPPLSPLATPSPQA 427
Score = 35.0 bits (79), Expect = 0.34
Identities = 142/605 (23%), Positives = 185/605 (30%), Gaps = 146/605 (24%)
Query: 96 APRAPPGLTPAPAS-----PPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIK 150
A RAP LTP P PPV P R A P E A A E P
Sbjct: 18 AARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP-- 75
Query: 151 LQPQRGGPGRVA----------PLCAAAGRCAPPEPPAGPAP---HVRCRLDIKPDDAVL 197
R GP R A P + G APP P P R +P
Sbjct: 76 ----RAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL-- 129
Query: 198 QHATRGSR-SCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDG 256
+G R S T A A AP+ L+ R + TPS + RA +
Sbjct: 130 --GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEV 187
Query: 257 PLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELS 316
LP P A R PP TE P+ + +AS T + P P+ +
Sbjct: 188 GLPRPAPSARPR------PP-------TEGPR--KSVSSASEHSTTE-----PSPA---A 224
Query: 317 GPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPE-EPRAHSTARPFY 375
P GG R+ P S P A G P P + + +P+ RP
Sbjct: 225 RRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRP-- 282
Query: 376 TEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDPDPLLASWHGGTGTSP 435
P+ +P D P L P + P P A +P
Sbjct: 283 -------------------PQVTPPRKDAAP-ALGPLSSSPLATPSPSAAL----QSQAP 318
Query: 436 PRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVN 495
P L + H S + P P P PP +
Sbjct: 319 PTLPA-TPHSSSLTCQLATPLPL------------------------APPSPSAPPSLQT 353
Query: 496 LSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDL-------RATERPSA 548
L + P T +A LG +P + T + L AT P A
Sbjct: 354 LPSPP------------ATPPSQATTSLG-----SPTLQATHSFLPSPPLSPLATPPPQA 396
Query: 549 -RAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVID-------SRPTAGQASE 600
A LP + P P A+P P S Q + ++ S P S
Sbjct: 397 PPALALPPLQAPPSPPASP--PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 454
Query: 601 PAADCLGPQLRRLLDSRPAGSGAPAL---APPRSPPASAGSAEEPAAPGEAAD-----AS 652
PA+ + P + P+ + P +PP SPP S + P AP A A
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 653 PEPSA 657
P P A
Sbjct: 515 PPPQA 519
Score = 33.9 bits (76), Expect = 0.76
Identities = 63/246 (25%), Positives = 82/246 (33%), Gaps = 29/246 (11%)
Query: 92 RSKSAPRAPPGLTPA---------PASPPVLPRRGREAQRAARAEASPRREPAYPALRAL 142
R +PR PP +TPA L R A E++PR A P A
Sbjct: 28 RPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR---AGPTRSAG 84
Query: 143 ANELHPIKLQPQRGGPGRVAPL-CAAAGRCAPPEPPAG---PAPHVRCRLDIKPDDAVLQ 198
+ +P P G R P + G + P +G P P + L I ++ V
Sbjct: 85 TSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV-- 142
Query: 199 HATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPL 258
RG + P +A A G T PG A++R + + PR P
Sbjct: 143 --ARGKATEAPKRSALSAGARRDTSGPT-PGTPSPAMARRSRAAGTEVGLPRPAPSARPR 199
Query: 259 P---GPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEEL 315
P GPR S TT P P P G P + P S
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAA---RRRPSA--GGGLQRPASRSLSSSATPLSSPAR 254
Query: 316 SGPSPR 321
SGPS R
Sbjct: 255 SGPSAR 260
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 51.6 bits (122), Expect = 4e-06
Identities = 92/338 (27%), Positives = 116/338 (34%), Gaps = 65/338 (19%)
Query: 27 SKCSP-----CERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRAR 81
++C P C R P+ P +RHCR LP+PPP + R
Sbjct: 144 ARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCH--------CRRRPLPKPPPLQ-----PR 190
Query: 82 TREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRA 141
A P R A + RA P L+P PRR R RAE SP P R+
Sbjct: 191 LGSASPPRLAAPLAGSRA-PSLSP-------FPRRCRR-----RAERSPAGH-GLPLPRS 236
Query: 142 LANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHAT 201
L+ + + +RGG R P PAGPA P A + A
Sbjct: 237 LSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPA---------APGRAGERRAA 287
Query: 202 R--GSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADP-RAFYCDGP- 257
R R GP + G P R + P+P+ P RA + GP
Sbjct: 288 RQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPR 347
Query: 258 LPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSG 317
L P AE P G T T EP R + A S G R PS
Sbjct: 348 LSAPSAEAEE------VPGGHTASNPTYEPLSSRRTKAPSEG--------RDSPS----- 388
Query: 318 PSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLP 355
SP Y E + PSRS Y +P + +P
Sbjct: 389 -SPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVP 425
Score = 38.9 bits (89), Expect = 0.024
Identities = 85/317 (26%), Positives = 97/317 (30%), Gaps = 62/317 (19%)
Query: 68 PEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAE 127
P P PE A T P A RAPP + PAP PP R A AA A
Sbjct: 14 PAPGCPEVAPQPEGTDAPGP---AVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGAT 70
Query: 128 ASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCR 187
A P R L P+ + GP AP A G C P P R
Sbjct: 71 GVGAALLALPGSRRLGRV--PLTFREASPGPAPGAP--RARGSCG-----REPGPRRR-- 119
Query: 188 LDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCA 247
R S G AA AR AP PR +L+R S C
Sbjct: 120 --------------RAPSSAGKRPAAA-ARAAP---------PRQRSLARCLPRSVGSCV 155
Query: 248 DPRAFYCDGPLPGPRDYAER------RSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPT 301
P GP PR + R R P PP + P A S P+
Sbjct: 156 RPSV----GP-SLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210
Query: 302 FDAYYPRPYPSEELSG-----PSPRRM--GGYYAGEVRTFPIQEPPSRSYYGEAPRAYGL 354
+ R E S P PR + GG G R +E R R G
Sbjct: 211 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG------RRQGC 264
Query: 355 PYGPRYVPEEPRAHSTA 371
G +P P A A
Sbjct: 265 ALGSPPIPAGPAAPGRA 281
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 4e-06
Identities = 78/313 (24%), Positives = 105/313 (33%), Gaps = 49/313 (15%)
Query: 66 TLPEPPPPESAVPRARTREAEPRRRARSKSA---PRAPPGLTPAPASPPVLPRRGREAQR 122
T P PP A P + + P S SA P+APP L P P + A
Sbjct: 426 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA 485
Query: 123 AARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP-- 180
+A P ++P +A + + + P P + P+ AA PP PPA P
Sbjct: 486 TPPLQALPSPPASFPG-QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL 544
Query: 181 -APH-------------VRCRLDIKPDDAVLQHATRGSRSCGPTEAAHW--ARPAPQFHG 224
AP R L + P + S GP A H A P+
Sbjct: 545 QAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 604
Query: 225 LTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPP-------- 276
GP A + P ++ P A + GP P P + P PP
Sbjct: 605 GYDSGPEGGAAASPPPDAELAACHPAA-WSRGPAP-PLAFRGAPGAPLPWPPATGPGSAD 662
Query: 277 GPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPI 336
G + TE P+ +A+P P A P GPSP GG A
Sbjct: 663 GLCTIYETEGPE------SATPAP--GALDP---------GPSPGTSGGKAAAGAGAGAS 705
Query: 337 QEPPSRSYYGEAP 349
P ++ GE P
Sbjct: 706 SRSPKQARLGELP 718
Score = 50.8 bits (120), Expect = 6e-06
Identities = 85/333 (25%), Positives = 110/333 (33%), Gaps = 52/333 (15%)
Query: 62 PAMETLPEPP--PPESAVPR--ARTREA------EPRRRARSKSAPRAPPGLT------- 104
P+++TLP PP PP A + T +A P + P+APP L
Sbjct: 310 PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAP 369
Query: 105 -PAPASPPVLPRRGREAQR----AARAEASPRREPAYPALRALANELHPIKLQPQRGGPG 159
PASPP+ P Q A +P P P ++A + + P P
Sbjct: 370 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 429
Query: 160 RVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPA 219
+ P AA PP PPA P P A A + P A A
Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSA---TPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Query: 220 PQFHGLTVPGPRHMALSRTP-TPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGP 278
P L P P + P +PS S P A P P A +P + P P
Sbjct: 487 PPLQAL--PSPPASFPGQAPFSPSASLPMSPLA--TPPPQAPPVLAAPLLQVPPSPPASP 542
Query: 279 TQFFYTEEP--------QGFRGSFAASPGPTFDAYYPRPYPSEELSGP-----------S 319
T P G R + A +PGP P PS LSGP +
Sbjct: 543 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP---PSRSPSSTLSGPDLAGHSSSATST 599
Query: 320 PRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAY 352
P + GY +G PP P A+
Sbjct: 600 PEELRGYDSGPEGGAAASPPPDAELAACHPAAW 632
Score = 49.3 bits (116), Expect = 2e-05
Identities = 159/655 (24%), Positives = 205/655 (31%), Gaps = 108/655 (16%)
Query: 73 PESAVPRARTREAEPRRRARSKSAPRA---PPGLTPAPASPPVLPRRGREAQRAAR--AE 127
PESA TR + P R + AP A PG +P R G Q+ R AE
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130
Query: 128 ASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPP-AGPAPHVRC 186
+ R A A + A + PG +P A R A E PAP R
Sbjct: 131 ETVARGKATEAPKRSALSA-GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 189
Query: 187 RLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQF-HGLTVPGPRHMALSRTPTPS--- 242
R P + + + TE + AR P GL P R ++ S TP S
Sbjct: 190 R----PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 245
Query: 243 --DSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPP--------GPTQFFYTEEPQGFRG 292
S PRA P P+ R P TPP GP P
Sbjct: 246 SGPSARGTPRA-PAHPSQPKPKGLQALRP-PQVTPPRKDAAPALGPLSSSPLATP----- 298
Query: 293 SFAASPGPTF-DAYYPRPYPSEELSGPSPRRMGGYYAGEVRTF-------PIQEPPSRSY 344
S +A P P+ + P P + +G +F P+ PP
Sbjct: 299 SPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP--- 355
Query: 345 YGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDV--LARTYPHPRSSPAWA 402
+AP A LP P P P A P T V L + P S P A
Sbjct: 356 --QAPPALALP--PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 411
Query: 403 DWGP--RPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRRE 460
+ P P + PPS P LA +PP S S P P+
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLA--------APPLQVPPSPPASPPMSPSATPPPQAP 463
Query: 461 DPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRY---------AALSLSET 511
PL ++ +P +P P + L + P + A+L +S
Sbjct: 464 PPLAAP-------PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL 516
Query: 512 SLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTR----------PP 561
+ T +A L P L+A RP + R PP
Sbjct: 517 A-TPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP 575
Query: 562 PHAAPDGPTSGRQRSLEQLDELITDLVI---DSRPTAGQASEPAADCLGPQLRRLLDSR- 617
P +P SG + T + DS P G A+ P D SR
Sbjct: 576 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 635
Query: 618 PA-------GSGAPALAPPRSPPASA----------GSAEEPAAPGEAADASPEP 655
PA GAP PP + P SA G APG A D P P
Sbjct: 636 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPG-ALDPGPSP 689
Score = 45.8 bits (107), Expect = 2e-04
Identities = 62/248 (25%), Positives = 88/248 (35%), Gaps = 18/248 (7%)
Query: 406 PRPYRTLQVVPPSDPDPL-LASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRRED-PL 463
PRP + + PP P L + G G P + ++ GP R P
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPP 86
Query: 464 GRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGL 523
GR E + P VS GR P L +S +G+A E
Sbjct: 87 ASGRG-ERAPPAKNTSPGPVSSPGRASGTT---RPGPLGQKGLRISAEETVARGKATEAP 142
Query: 524 GRNWYVTPEITITDNDLRATERPS----ARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQ 579
R+ T T P+ +RA G RP P A P PT G ++S+
Sbjct: 143 KRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSS 202
Query: 580 LDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSA 639
E T + P+ P+A G L+R + S P +P RS P++ G+
Sbjct: 203 ASEHST-----TEPSPAARRRPSA---GGGLQRPASRSLSSSATPLSSPARSGPSARGTP 254
Query: 640 EEPAAPGE 647
PA P +
Sbjct: 255 RAPAHPSQ 262
Score = 38.9 bits (89), Expect = 0.024
Identities = 92/347 (26%), Positives = 120/347 (34%), Gaps = 54/347 (15%)
Query: 348 APRAYGLPYGPRYVPEE-PRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGP 406
A RA G+ G +PE PRA T R GR T P P SSP A
Sbjct: 59 AERAGGI--GGATIPESAPRAGPT-RTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 115
Query: 407 RPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLGRG 466
RP Q + +A G T P+ + S R P P P
Sbjct: 116 RPGPLGQKGLRISAEETVAR---GKATEAPKRSALSAGARRDTSG---PTPGTPSPAMAR 169
Query: 467 RSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTE-------KGRA 519
RS G EV PR RPP T R + S SE S TE + A
Sbjct: 170 RS--RAAGTEVGLPRPAPSARPRPP------TEGPRKSVSSASEHSTTEPSPAARRRPSA 221
Query: 520 GEGLGRNWYVTPEITITDNDLRATERPSARAW-ELPGGRTRPPPHAA----PDGPTSGRQ 574
G GL R + + T A PSAR P ++P P P T R+
Sbjct: 222 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRK 281
Query: 575 RSLEQLDELITDLVIDSRPTA--GQASEPAADCL----------------GPQLRRLLDS 616
+ L L + + P+A ++ P+ L P L+
Sbjct: 282 DAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSF 341
Query: 617 RPAGSGAP-ALAPPRSPPASA-----GSAEEPAAPGEAADASPEPSA 657
P+ +P A PP++PPA A PA+P + A+P P A
Sbjct: 342 LPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQA 388
Score = 38.5 bits (88), Expect = 0.031
Identities = 92/359 (25%), Positives = 115/359 (32%), Gaps = 59/359 (16%)
Query: 96 APRAPPGLTPAPAS-----PPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIK 150
A RAP LTP P PPV P R A P E A A E P
Sbjct: 18 AARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP-- 75
Query: 151 LQPQRGGPGRVA-PLCAAAGRCAPPEPPAGPAP---HVRCRLDIKPDDAVLQHATRGSR- 205
R GP R + P + G APP P P R +P +G R
Sbjct: 76 ----RAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL----GQKGLRI 127
Query: 206 SCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYA 265
S T A A AP+ L+ R + TPS + RA + LP P A
Sbjct: 128 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 187
Query: 266 ERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGG 325
R PP TE P+ + +AS T + P P+ + P GG
Sbjct: 188 RPR------PP-------TEGPR--KSVSSASEHSTTE-----PSPA---ARRRPSAGGG 224
Query: 326 YYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPE-EPRAHSTARPFYTEDFGRYRE 384
R+ P S P A G P P + + +P+ RP
Sbjct: 225 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV-------- 276
Query: 385 RDVLARTYPHPRSSPAWADWGPRPYRT-LQVVPPSDPDPLLASWHGGTGTSPPRLATDS 442
T P ++PA P T PPS P +PP AT S
Sbjct: 277 ------TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTS 329
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 50.8 bits (120), Expect = 6e-06
Identities = 121/454 (26%), Positives = 149/454 (32%), Gaps = 86/454 (18%)
Query: 83 REAEPRRRARSKSAPRAPPGLTPAP---------ASPPVLPRRGREAQRAARAEASPRRE 133
R A+PR ARS + R PP PAP SPPV PR + P
Sbjct: 629 RRAQPR--ARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPR--------PPSSGPPPAP 678
Query: 134 PAYPALRALANELHPI----KLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLD 189
P PAL L P + P P V P A A EPPA +P V L
Sbjct: 679 PLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPP-APQASWWAFVEPPA-VSPEVPPDLL 736
Query: 190 IKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADP 249
P + + RGSR G A F G + R A S +P S + P
Sbjct: 737 AFPGP---RPSFRGSRRRG---------AAFGFPGASPRASRRRAWSPLASPQPSLRSSP 784
Query: 250 RAFYCDGPLPGPRDYAERRSLPFT---TPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYY 306
YC PL P R+ PF PP E P R + P +
Sbjct: 785 GLGYC-SPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLPGS 843
Query: 307 PRPYPSEELS-GPSPRRMGGYYAGEV-RTF-PIQEPPSRSY-------YGEAPR--AYGL 354
PRP PS L SPRR + T+ + EPP+R+ + PR A+
Sbjct: 844 PRP-PSPPLGLCHSPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRA 902
Query: 355 PYGPRYVPEEPRAHST------ARPFYTEDF-----------GRYRERDVLARTYPHPRS 397
P R P EP T P + D G R +R P P
Sbjct: 903 PLEHRESPREPEDSETPWTVPPLAPSWDVDMPPTQRPPSPWPGGAGSRRGFSRPPPVP-E 961
Query: 398 SPAWADWGPRPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYSRSWDNILAPGP 457
+P GP P TLQ P DP R+ H + GP
Sbjct: 962 NPFLQLLGPVPSPTLQ---PEDP-----------AADMTRVFLGRHHEPGPGQLTKSAGP 1007
Query: 458 RREDPLGRGRSYENLLGREVREPRGVSPEGRRPP 491
E P + L E + P P+ PP
Sbjct: 1008 TPEKPEEEATLGDPQLPAETKPPTPAPPKDVTPP 1041
Score = 43.9 bits (102), Expect = 7e-04
Identities = 108/451 (23%), Positives = 146/451 (32%), Gaps = 74/451 (16%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRH------------CRSFDFLEALDGPAMETLPEP 70
P PA SP + RPA P +RH + ++ PA+ PE
Sbjct: 674 PPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVS--PEV 731
Query: 71 PPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASP 130
PP A P R RRR + P A P + A P+ + SP
Sbjct: 732 PPDLLAFPGPRPSFRGSRRRGAAFGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSP 791
Query: 131 RREPAYPALRALANELHPIKLQPQRGGPGRVAPLCA---AAGRCAPPEPPAGPAPHVRCR 187
P+ P L P L P R P + A AAGR PP P +P
Sbjct: 792 LAPPS-PQLSLRTGPFQPPFLPPARR-PRSLQESPAPRRAAGRLGPPGSPLPGSPR---- 845
Query: 188 LDIKPDDAV-LQHATRGSRSCGPTEAAH-WARPAPQFHGLTVPGPRHMALSRTPTPSDSY 245
P + L H+ R S P+ H W R L+ P R + P +
Sbjct: 846 ---PPSPPLGLCHSPRRSSLNLPSRLPHTWRR-------LSEPPTRAVK----PQVRLPF 891
Query: 246 CADPRAFYCDGPLP---GPRDYAERRSLPFTTPP---------GPTQFFYTEEP--QGFR 291
PRA PL PR+ E P+T PP PTQ + P G R
Sbjct: 892 HRPPRAGAWRAPLEHRESPRE-PEDSETPWTVPPLAPSWDVDMPPTQRPPSPWPGGAGSR 950
Query: 292 GSFAASP----GPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGE 347
F+ P P P P P+ + P+ + P Q S E
Sbjct: 951 RGFSRPPPVPENPFLQLLGPVPSPTLQPEDPAADMTRVFLGRHHEPGPGQLTKSAGPTPE 1010
Query: 348 APRAYGLPYGPRYVPEEPRAHSTARPF-------YTEDFGRYRERDVLARTYPHPRSS-- 398
P P+ +P E + + A P T E+ L + +P ++
Sbjct: 1011 KPEEEATLGDPQ-LPAETKPPTPAPPKDVTPPKDITPPKDVLPEQKTLRPSLSYPLAACD 1069
Query: 399 ------PAWADWGPRPYRTLQVVPPSDPDPL 423
P W WG P + P P+PL
Sbjct: 1070 QTRATWPPWHRWGTLPQAAAPLAPIRAPEPL 1100
Score = 39.3 bits (90), Expect = 0.018
Identities = 107/451 (23%), Positives = 138/451 (30%), Gaps = 72/451 (15%)
Query: 19 KVATPGPASKCSPCERS---VARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPES 75
K TP + P RS RP P P R+ AL P + P P
Sbjct: 621 KPGTPIVLRRAQPRARSSNDARRPPAPQPAP----RTLSHWSALLSPPVPPRPPSSGPPP 676
Query: 76 AVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPA 135
A P + PR + S R PP APA P P +A A E
Sbjct: 677 APPLSPALSGLPRPASPYGSLRRHPPPWA-APAHVPPAP----QASWWAFVEPPAVSPEV 731
Query: 136 YPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDA 195
P L A + +RG A R P A P P +R +
Sbjct: 732 PPDLLAFPGPRPSFRGSRRRGAAFGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSP 791
Query: 196 VLQHATRGSRSCGPTE----------AAHWARPAPQFHG--LTVPGPRHMALSRTPTPSD 243
+ + + S GP + + PAP+ L PG R P+P
Sbjct: 792 LAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPL 851
Query: 244 SYCADPRAFYCDGPL-----------PGPRDYAERRSLPFTTPP------GPTQFFYT-E 285
C PR + P P R + LPF PP P + +
Sbjct: 852 GLCHSPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRAPLEHRESPR 911
Query: 286 EPQGFRGSFAASP-GPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSY 344
EP+ + P P++D P P++ P P G G R P+ E P
Sbjct: 912 EPEDSETPWTVPPLAPSWDVDMP---PTQRPPSPWPGGAGS-RRGFSRPPPVPENPFLQL 967
Query: 345 YGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRE---RDVLARTYPHPRSSPAW 401
G P P PE+P A T R F GR+ E + P P
Sbjct: 968 LGPVP-------SPTLQPEDPAADMT-RVF----LGRHHEPGPGQLTKSAGPTPEKPEEE 1015
Query: 402 ADWG----------PRPYRTLQVVPPSDPDP 422
A G P P V PP D P
Sbjct: 1016 ATLGDPQLPAETKPPTPAPPKDVTPPKDITP 1046
Score = 32.3 bits (72), Expect = 2.2
Identities = 125/520 (24%), Positives = 172/520 (33%), Gaps = 83/520 (15%)
Query: 174 PEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPT-EAAHWARPAPQFHGLTVPGPRH 232
P P A ++ L K A L+ + + +R+ GP A + R + G+ P
Sbjct: 566 PRPATSLARFLKKTLSEKKPIARLRGSQK-ARAGGPAVREAAYKRFGYKLAGMDPEKPGT 624
Query: 233 MALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRG 292
+ R P D R P P PR + +L +PP P
Sbjct: 625 PIVLRRAQPRARSSNDARR--PPAPQPAPRTLSHWSAL--LSPPVP-------------- 666
Query: 293 SFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPP--SRSYYGEAPR 350
P P P P S LSG PR Y G +R P PP + ++ AP+
Sbjct: 667 -----PRPPSSGPPPAPPLSPALSG-LPRPASPY--GSLRRHP---PPWAAPAHVPPAPQ 715
Query: 351 A--YGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRP 408
A + P PE P A P F R R + P +SP R
Sbjct: 716 ASWWAFVEPPAVSPEVP-PDLLAFPGPRPSFRGSRRRGA---AFGFPGASP-------RA 764
Query: 409 YRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYSRS---WDNILAPGPRREDPLGR 465
R P + P P L S G SP LA S S + P RR L
Sbjct: 765 SRRRAWSPLASPQPSLRSSPGLGYCSP--LAPPSPQLSLRTGPFQPPFLPPARRPRSLQE 822
Query: 466 GRSYENLLGREVREPRGVSPEGRRPPVV-VNLSTSPRRYAALSLSETSLTEKGRAGEGLG 524
+ GR + P P RPP + L SPRR ++L+L R E
Sbjct: 823 SPAPRRAAGR-LGPPGSPLPGSPRPPSPPLGLCHSPRR-SSLNLPSRLPHTWRRLSEPPT 880
Query: 525 RNWYVTPEITIT------------------------DNDLRATERPSARAWELPGGRTRP 560
R V P++ + D++ T P A +W++ T+
Sbjct: 881 RA--VKPQVRLPFHRPPRAGAWRAPLEHRESPREPEDSETPWTVPPLAPSWDVDMPPTQR 938
Query: 561 PPHAAPDGPTS--GRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRP 618
PP P G S G R + L+ Q +PAAD L R + P
Sbjct: 939 PPSPWPGGAGSRRGFSRPPPVPENPFLQLLGPVPSPTLQPEDPAADMTRVFLGRHHEPGP 998
Query: 619 AGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSAD 658
G + P P + +P P E +P P D
Sbjct: 999 -GQLTKSAGPTPEKPEEEATLGDPQLPAETKPPTPAPPKD 1037
Score = 31.6 bits (70), Expect = 3.8
Identities = 58/192 (30%), Positives = 72/192 (37%), Gaps = 37/192 (19%)
Query: 482 GVSPEGRRPPVVVNLSTSPRRYAALSLSETSL------TEKGRAGEGLGRNWY------- 528
G PE RP V +TS R+ +LSE ++K RAG R
Sbjct: 556 GFGPEFGRP--VPRPATSLARFLKKTLSEKKPIARLRGSQKARAGGPAVREAAYKRFGYK 613
Query: 529 ---VTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELIT 585
+ PE T LR R RA R P P AP R+L L++
Sbjct: 614 LAGMDPEKPGTPIVLR---RAQPRARSSNDARRPPAPQPAP--------RTLSHWSALLS 662
Query: 586 DLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAP 645
V P++G P A L P L L RPA +P + R PP A A P AP
Sbjct: 663 PPVPPRPPSSGP---PPAPPLSPALSGL--PRPA---SPYGSLRRHPPPWAAPAHVPPAP 714
Query: 646 GEAADASPEPSA 657
+ A EP A
Sbjct: 715 QASWWAFVEPPA 726
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 48.9 bits (115), Expect = 2e-05
Identities = 53/158 (33%), Positives = 59/158 (37%), Gaps = 34/158 (21%)
Query: 26 ASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPP-PESAVPRARTRE 84
A++ P R PA P R R A P P PPP P +A AR
Sbjct: 96 AARVQPPRRGATPPAPP-----RAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA-- 148
Query: 85 AEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALAN 144
PR A +A APP +P PA P G AQRAA A P A PA+ A
Sbjct: 149 --PRAAA---AAATAPP--SPGPAQP------GPRAQRAAPLAAPPPAPAAPPAVAPPA- 194
Query: 145 ELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAP 182
GP R P AA P PP PAP
Sbjct: 195 ------------GPRRAPPPAVAAREPPLPPPPQPPAP 220
Score = 40.4 bits (93), Expect = 0.008
Identities = 40/135 (29%), Positives = 46/135 (34%), Gaps = 21/135 (15%)
Query: 150 KLQPQRGGPGRVAP------LCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRG 203
++QP R G AP AAA APP PA P P P R
Sbjct: 98 RVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPP---------PAPVAAAAPARA 148
Query: 204 SRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRD 263
R+ AA A P+P G PGPR + P + A P GP P
Sbjct: 149 PRAAA---AAATAPPSP---GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPP 202
Query: 264 YAERRSLPFTTPPGP 278
R P PP P
Sbjct: 203 AVAAREPPLPPPPQP 217
Score = 33.9 bits (76), Expect = 0.76
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 790 APLGSYARELAAAGR---LYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSHGPTVRK 846
AP G+ A AAA P + + + A P A A P+P P GP ++
Sbjct: 114 APRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQR 173
Query: 847 FAKVALAAGSPARP----PPARSREPDMETLILTPPP 879
A +A +PA P PPA R + PP
Sbjct: 174 AAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP 210
Score = 32.7 bits (73), Expect = 1.7
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 822 PGTAPPGTPALPAPAPRSHGPTVRKFAKVALAAGSPARPPPARSREPDMETLILTPPPGT 881
P AP PA+ PA GP R+ A+AA P PPP + P + PPP
Sbjct: 180 PPPAPAAPPAVAPPA----GP--RRAPPPAVAAREPPLPPPPQPPAPPQQQ---QPPPPQ 230
Query: 882 AGLDQDG---EAGRRAREVAFIHIQREL 906
+G AG AR V+ + R L
Sbjct: 231 PQPPPEGGAVRAGGAARPVSLREVVRYL 258
Score = 32.3 bits (72), Expect = 2.2
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 16/102 (15%)
Query: 568 GPTSGRQRSLEQLDELITDLVI--------DSRPTAGQASEPAADCLGPQLRRLLDSRPA 619
GP R R+ +L++LI + S A + P P R PA
Sbjct: 63 GPEPERTRA--ELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPA 120
Query: 620 GSGA------PALAPPRSPPASAGSAEEPAAPGEAADASPEP 655
+ A PA PP +P A+A A P A AA A P P
Sbjct: 121 AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Score = 32.3 bits (72), Expect = 2.2
Identities = 38/136 (27%), Positives = 46/136 (33%), Gaps = 26/136 (19%)
Query: 20 VATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMET---LPEPPPPESA 76
VA PA + P P P A GP + L PPP +A
Sbjct: 140 VAAAAPARAPRAAAAAATAPPSPGP-------------AQPGPRAQRAAPLAAPPPAPAA 186
Query: 77 VPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAY 136
P A A PRR A R PP P P PP P Q+ P+ P
Sbjct: 187 -PPAVAPPAGPRRAPPPAVAAREPP--LPPPPQPPAPP------QQQQPPPPQPQPPPEG 237
Query: 137 PALRALANELHPIKLQ 152
A+RA P+ L+
Sbjct: 238 GAVRA-GGAARPVSLR 252
Score = 30.8 bits (68), Expect = 6.5
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Query: 560 PPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRR---LLDS 616
PPP AP P + + + P+ G A GP+ +R L
Sbjct: 127 PPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP------GPRAQRAAPLAAP 180
Query: 617 RPAGSGAPALAP----PRSPPASAGSAEEPAAPGEAADASPE 654
PA + PA+AP R+PP + + E P P A P+
Sbjct: 181 PPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQ 222
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 48.1 bits (113), Expect = 4e-05
Identities = 81/331 (24%), Positives = 103/331 (31%), Gaps = 33/331 (9%)
Query: 20 VATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPR 79
++ PGP P P P P + GP P PP ++
Sbjct: 175 ISVPGPMGPSGP-RGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDG 233
Query: 80 ARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASP---RREPAY 136
+ P R P+ GL P + RG A+ +A P + EP
Sbjct: 234 EAGKPGRPGERG--PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGS 291
Query: 137 PALRALANELHPIKLQPQRGGPGRVAPLCA-----AAGRCAPPEP--PAGPAPH---VRC 186
P ++ P L +RG PG P A A G PP P PAGP V
Sbjct: 292 PGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGA 351
Query: 187 RLDIKPDDAVLQHATRGSR-SCGPTEAAHWARPAPQFHGLTVPGPR--HMALSRTPTPSD 243
+ + P +G R GP A A PA PG + + A P
Sbjct: 352 KGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGF 411
Query: 244 SYCADPRAFYCDGPLPGPRDYAERRSLPFTT-------PPGPTQFFYTEEPQGFRGSFAA 296
P G PGP+ + P + PGP P G G A
Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGA 471
Query: 297 --SPGPTFDAYYPRPYPSEELSGPSPRRMGG 325
PGPT P P E GP R G
Sbjct: 472 RGEPGPT-----GLPGPPGERGGPGSRGFPG 497
Score = 37.0 bits (84), Expect = 0.090
Identities = 74/281 (26%), Positives = 86/281 (30%), Gaps = 36/281 (12%)
Query: 92 RSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKL 151
R + P PPG AP G AR R EP P A
Sbjct: 763 RGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ 822
Query: 152 QPQRGGPGRVAPLCAAAGRCAPPEP--PAGPAPHVRCRLDIKPDDAVLQHATRGSR-SCG 208
+G PG A G PP P PAGP P V +G+R S G
Sbjct: 823 PGAKGEPGD----AGAKGDAGPPGPAGPAGPP---------GPIGNVGAPGAKGARGSAG 869
Query: 209 PTEAAHW-------ARPAPQFHG--LTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLP 259
P A + P P + PGP + P P GP P
Sbjct: 870 PPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEV---GP-P 925
Query: 260 GPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRG--SFAASPGPTFDAYYP-RPYPSEELS 316
GP A + P GP T PQG G PG + +P P PS E
Sbjct: 926 GPPGPAGEKGSP--GADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPG 983
Query: 317 GPSPRRMGGYYA--GEVRTFPIQEPPSRSYYGEAPRAYGLP 355
P G G + + PP S AP A G P
Sbjct: 984 KQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP 1024
Score = 34.7 bits (78), Expect = 0.45
Identities = 95/391 (24%), Positives = 121/391 (30%), Gaps = 96/391 (24%)
Query: 24 GPASKCSPCER--SVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPP-------- 73
GP + P R V P P P ++ DGPA P P P
Sbjct: 908 GPRGETGPAGRPGEVGPPGPPGPAGEKGS------PGADGPA--GAPGTPGPQGIAGQRG 959
Query: 74 ---------ESAVPRARTREAEPRRRARS-KSAPRAPPGL--TPAPASPPVLPRRGREAQ 121
E P EP ++ S S R PPG P A PP GRE
Sbjct: 960 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPP--GESGREG- 1016
Query: 122 RAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAP-----PEP 176
A AE SP R+ + P + E P G PG P+ AG+ P
Sbjct: 1017 -APGAEGSPGRDGS-PGAKGDRGETGPAGPPGAPGAPGAPGPV-GPAGKSGDRGETGPAG 1073
Query: 177 PAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALS 236
PAGP V R P RG + + + F GL P
Sbjct: 1074 PAGPVGPVGARGPAGP------QGPRGDKGETGEQGDRGIKGHRGFSGLQGP-------- 1119
Query: 237 RTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAA 296
P P S PG + GP+ P G RG +
Sbjct: 1120 --PGPPGS--------------PGEQ--------------GPSG---ASGPAGPRGPPGS 1146
Query: 297 SPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPY 356
+ P D P P + P PR G AG V PP P + G +
Sbjct: 1147 AGAPGKDGLNGLPGP---IGPPGPRGRTG-DAGPVGPPGPPGPPG----PPGPPSAGFDF 1198
Query: 357 GPRYVPEEPRAHSTARPFYTEDFGRYRERDV 387
P + +AH R + +D R+RD+
Sbjct: 1199 SFLPQPPQEKAHDGGRYYRADDANVVRDRDL 1229
Score = 31.6 bits (70), Expect = 3.8
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 595 AGQASEPAADCLGPQLRRLLDSRPAGSGAP----ALAP-----PRSPPASAGSAEEPAAP 645
AG A P AD G + + P +GAP A P P PP G++ EP AP
Sbjct: 382 AGPAGNPGAD--GQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAP 439
Query: 646 GEAAD--ASPEP 655
G D A EP
Sbjct: 440 GSKGDTGAKGEP 451
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 48.1 bits (113), Expect = 4e-05
Identities = 84/329 (25%), Positives = 112/329 (34%), Gaps = 39/329 (11%)
Query: 22 TPGPASKCSPCERSVA---------RPAEPA----PFNKRHCRSFDFLEALDGPAMETLP 68
TP PA+ P ++ A +P+ P+ P H + A+ T
Sbjct: 347 TPRPAA-AQPSQKITATKIPKSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQK 405
Query: 69 EPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLT-PAP----ASPPVLPRRGR----- 118
+ PP VP +R AE + R+ PR PP T P P +S +P R
Sbjct: 406 QVPPTSRPVPARVSRPAE-KPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKI 464
Query: 119 --EAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLC-AAAGRCAPPE 175
A + A A S + P + AL + + P + R V P + R AP
Sbjct: 465 TSHASKPASARTSTHKPPPFTALSS-SPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAV 523
Query: 176 PPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMAL 235
P G AP + I + + R P AR P T P PR
Sbjct: 524 PTPGSAP-TGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRPSPRQPQP 582
Query: 236 SRTPTPSDSYCADPRAFYCDGPLPGPRDYA---ERRSLPFTT---PPGPTQFFYTEEPQG 289
S+ TP + P F P P Y+ S PF PPGP P G
Sbjct: 583 SQQTTP--ALVLAPAQFLSSSPRPTSSGYSIFHLAGSTPFPLLMGPPGPKGDCGLPGPPG 640
Query: 290 FRGSFAASPGPTFDAYYPRPYPSEELSGP 318
G PG P PY + L GP
Sbjct: 641 LPG-LPGIPGARGPRGPPGPYGNPGLPGP 668
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 47.8 bits (112), Expect = 5e-05
Identities = 83/332 (25%), Positives = 113/332 (34%), Gaps = 67/332 (20%)
Query: 62 PAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRA--PPGLTPAPASPP--VLPRRG 117
P+ P+ PPP +A P + P A +P A PP + P A+PP V P
Sbjct: 718 PSATPPPQAPPPLAAPPL----QVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPP 773
Query: 118 REAQRAARAEASPRREPAY--PALRALANE------------LHPIKLQPQRGGPGRVAP 163
+ A+ P+ PA P L+AL + + + P P + P
Sbjct: 774 ASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 833
Query: 164 LCAAAGRCAPPEPPAGP---APH-------------VRCRLDIKPDDAVLQHATRGSRSC 207
+ AA PP PPA P AP R L + P + S
Sbjct: 834 VLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLS 893
Query: 208 GPTEAAHW--ARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYA 265
GP A H A P+ GP A + P ++ P A + GP P P +
Sbjct: 894 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA-WSRGPAP-PLAFR 951
Query: 266 ERRSLPFTTPP--------GPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSG 317
P PP G + TE P+ +A+P P A P G
Sbjct: 952 GAPGAPLPWPPATGPGSADGLCTIYETEGPE------SATPAP--GALDP---------G 994
Query: 318 PSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAP 349
PSP GG A P ++ GE P
Sbjct: 995 PSPGTSGGKAAAGAGAGASSRSPKQARLGELP 1026
Score = 47.4 bits (111), Expect = 7e-05
Identities = 77/318 (24%), Positives = 100/318 (31%), Gaps = 38/318 (11%)
Query: 21 ATPGPASKCSP-CERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPR 79
A P P + P S+A P AP AL P ++ LP PP A P
Sbjct: 571 APPSPLTTPPPETPSSIATPPPQAP------------PALASPPLQGLPSPPLSPLATPP 618
Query: 80 ARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPAL 139
+A P AP +PP P SP P A +P P P +
Sbjct: 619 P---QAPPXLALPPLQAPPSPPA--SPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 673
Query: 140 RALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP--APHVRCRLDIKPDDAVL 197
+A + + P P + P AA PP PPA P +P P A
Sbjct: 674 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 733
Query: 198 QHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHM-----------ALSRTPTPSDSYC 246
S P + A P P+ L P + L++ P +
Sbjct: 734 PLQVPPSPPASPPMSPS-ATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPAL 792
Query: 247 ADPRAFYCDGP---LPGPRDYAERRSLPFT---TPPGPTQFFYTEEPQGFRGSFAASPGP 300
A P P PG ++ SLP + TPP S ASP
Sbjct: 793 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL 852
Query: 301 TFDAYYPRPYPSEELSGP 318
P P P +SGP
Sbjct: 853 QAPRRPPTPGPDTSVSGP 870
Score = 45.1 bits (105), Expect = 3e-04
Identities = 66/262 (25%), Positives = 90/262 (34%), Gaps = 37/262 (14%)
Query: 406 PRPYRTLQVVPPSDPDPL-LASWHGGTGTSPPRLATDSRHYSRSWDNILAPGPRREDPLG 464
PRP + + PP P L + G G P R I PR
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKP----LAERAGGIGGATIPESAPRAGPTRS 82
Query: 465 RGRSYENLLGREVREPRGVSPEGRRPPVVVNLS----TSPRRYAA-----------LSLS 509
G S N R RG R P N S +SP R + L +S
Sbjct: 83 AGTSSRNPASRPPASGRG-----ERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 137
Query: 510 ETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPS----ARAWELPGGRTRPPPHAA 565
+G+A E R+ T T P+ +RA G RP P A
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 566 PDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPA 625
P PT G ++S+ E T + P+ P+A G L+R + S P
Sbjct: 198 PRPPTEGPRKSVSSASEHST-----TEPSPAARRRPSA---GGGLQRPASRSLSSSATPL 249
Query: 626 LAPPRSPPASAGSAEEPAAPGE 647
+P RS P++ G+ PA P +
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQ 271
Score = 41.2 bits (95), Expect = 0.005
Identities = 152/671 (22%), Positives = 216/671 (32%), Gaps = 140/671 (20%)
Query: 19 KVATPGPASKCSPCERSVARPAEPAPFNKRHCR-----SFDFLEALDGPAMETLPEPPPP 73
K +PGP S SP S P P ++ R + +A + P L
Sbjct: 107 KNTSPGPVS--SPGRASGT--TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 74 ESAVPRARTREAEPRRRARSKSA----PRAPPGLTPAPASPPVLPRRG-REAQRAARAEA 128
+++ P T RR+R+ PR P P P P PR+ A + E
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP--PTEGPRKSVSSASEHSTTEP 220
Query: 129 SP--RREPAY------PALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGP 180
SP RR P+ PA R+L++ P+ P R GP +A G P P+ P
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSATPLS-SPARSGP-------SARGTPRAPAHPSQP 272
Query: 181 APHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPT 240
P +G ++ P + P+ GP + TP+
Sbjct: 273 KP-------------------KGLQALRPPQVT-----PPRKDAAPALGPLSSSPLATPS 308
Query: 241 PSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGP 300
PS + P+P P + A LP T PP P A+P P
Sbjct: 309 PSGTKAR---------PVPPPDNAA--TPLPATLPPSPP---------------LATPLP 342
Query: 301 TFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRY 360
P + L P P + T P+Q PPS + L
Sbjct: 343 LAPPSPSAPPSLQTLPSP-PATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401
Query: 361 VPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPP-SD 419
P P A S+ + T G + + PR + A RP T PP
Sbjct: 402 APPSPLALSSLQA--TTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQA 459
Query: 420 PDPLLASWHGGTGTSP---PRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGRE 476
P L AS T SP P + + H ++ ++ + P + PL +L+
Sbjct: 460 PLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSP--QAPL------SSLIMPP 511
Query: 477 VREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTEKGRAGEGLGRNWYVTPEITIT 536
+ ++P + P +L+T P +L + A L TP
Sbjct: 512 LETQSSLAPPSLQTP-PASLTTPPLE----NLPSLAPPPLQTASAPLTTPHLETPPCP-A 565
Query: 537 DNDLRATERP-SARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTA 595
L+A P + E P PPP A P + S P
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPP---------------------ALASPPLQ 604
Query: 596 GQASEPAADCLGPQLRRLLDSRPAGSGAPAL----APPRSPPASAGSAEEPAAPGE---- 647
G S P + P P P L +PP SPP S + P AP
Sbjct: 605 GLPSPPLSPLATPP-----PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH 659
Query: 648 --AADASPEPS 656
A SP PS
Sbjct: 660 LLQAPFSPPPS 670
Score = 35.8 bits (81), Expect = 0.20
Identities = 139/630 (22%), Positives = 184/630 (29%), Gaps = 126/630 (20%)
Query: 62 PAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQ 121
P TLP PP + +P A +P APP L P+ P P + +
Sbjct: 326 PLPATLPPSPPLATPLPLA-------------PPSPSAPPSLQTLPSPPATPPSQAPPSM 372
Query: 122 RAARAEASPRREP----------AYPALRALANELHPIKLQ--PQRGGPG--------RV 161
+A P + P+L+A + L LQ G P +
Sbjct: 373 TTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTM 432
Query: 162 APLCAAAGRCAPPEPPAGP--APHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPA 219
+P A +P P + P +P ++ L + P LQ T S + P + P
Sbjct: 433 SPRQTQASLTSPSRPASTPPDSPPLQAPLSL-PASPPLQ--TSLSPAVSPLSSPLTIHPL 489
Query: 220 PQFHGLTVPGPRH--MALSRTPTPSDSYCADPR-----AFYCDGPLPGPRDYA----ERR 268
L P+ +L P + S A P A PL A +
Sbjct: 490 QALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTA 549
Query: 269 SLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYA 328
S P TTP T P S +P P + P P + SP G
Sbjct: 550 SAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQG---L 606
Query: 329 GEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDV- 387
P+ PP +AP LP P P P A P T V
Sbjct: 607 PSPPLSPLATPPP-----QAPPXLALP--PLQAPPSPPASPPLSPLATPSPQAPNALAVH 659
Query: 388 -LARTYPHPRSSPAWADWGP--RPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRH 444
L + P S P A + P P + PPS P LA +PP S
Sbjct: 660 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA--------APPLQVPPSPP 711
Query: 445 YSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYA 504
S P P+ PL P V P P + +T P R
Sbjct: 712 ASPPMSPSATPPPQAPPPL-------------AAPPLQVPPSPPASPPMSPSATPPPRVP 758
Query: 505 ALSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHA 564
L L P + +P +A P PP A
Sbjct: 759 PL----------------LAAPPLQVPPSPPASLPMSPLAKPPPQA---PPALATPPLQA 799
Query: 565 APDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAP 624
P P S ++ P + AS P + P P AP
Sbjct: 800 LPSPPASFPGQA----------------PFSPSASLPMSPLATPP-----PQAPPVLAAP 838
Query: 625 ALAPPRSPPAS--AGSAEEPAAPGEAADAS 652
L P SPPAS + P PG S
Sbjct: 839 LLQVPPSPPASPTLQAPRRPPTPGPDTSVS 868
Score = 35.4 bits (80), Expect = 0.26
Identities = 87/373 (23%), Positives = 114/373 (30%), Gaps = 51/373 (13%)
Query: 92 RSKSAPRAPPGLTPA---------PASPPVLPRRGREAQRAARAEASPRREPAYPALRAL 142
R +PR PP +TPA L R A E++PR A P A
Sbjct: 28 RPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR---AGPTRSAG 84
Query: 143 ANELHPIKLQPQRGGPGRVAPL-CAAAGRCAPPEPPAG---PAPHVRCRLDIKPDDAVLQ 198
+ +P P G R P + G + P +G P P + L I ++ V
Sbjct: 85 TSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV-- 142
Query: 199 HATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPL 258
RG + P +A A G T PG A++R + + PR P
Sbjct: 143 --ARGKATEAPKRSALSAGARRDTSGPT-PGTPSPAMARRSRAAGTEVGLPRPAPSARPR 199
Query: 259 P---GPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEEL 315
P GPR S TT P P P G P + P S
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAA---RRRPSA--GGGLQRPASRSLSSSATPLSSPAR 254
Query: 316 SGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLP--YGPRYVPEEPRAHSTARP 373
SGPS R P + P+ GL P+ P A P
Sbjct: 255 SGPSAR----------------GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Query: 374 FYTEDFGRYRERDVLARTYPHPRSS----PAWADWGPRPYRTLQVVPPSDPDPLLASWHG 429
+ AR P P ++ PA P L + PPS P
Sbjct: 299 LSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLP 358
Query: 430 GTGTSPPRLATDS 442
+PP A S
Sbjct: 359 SPPATPPSQAPPS 371
Score = 35.0 bits (79), Expect = 0.34
Identities = 146/603 (24%), Positives = 184/603 (30%), Gaps = 102/603 (16%)
Query: 96 APRAPPGLTPAPAS-----PPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIK 150
A RAP LTP P PPV P R A P E A A E P
Sbjct: 18 AARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP-- 75
Query: 151 LQPQRGGPGRVA----------PLCAAAGRCAPPEPPAGPAP---HVRCRLDIKPDDAVL 197
R GP R A P + G APP P P R +P
Sbjct: 76 ----RAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL-- 129
Query: 198 QHATRGSR-SCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDG 256
+G R S T A A AP+ L+ R + TPS + RA +
Sbjct: 130 --GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEV 187
Query: 257 PLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELS 316
LP P A R PP TE P+ + +AS T + P P+ +
Sbjct: 188 GLPRPAPSARPR------PP-------TEGPR--KSVSSASEHSTTE-----PSPA---A 224
Query: 317 GPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPE-EPRAHSTARPFY 375
P GG R+ P S P A G P P + + +P+ RP
Sbjct: 225 RRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 284
Query: 376 TEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDPDPLLASWHGGTGTSP 435
R L P ++P+ + RP VPP PD SP
Sbjct: 285 VTP-PRKDAAPALGPLSSSPLATPSPSGTKARP------VPP--PDNAATPLPATLPPSP 335
Query: 436 PRLATDSRHYSRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVV- 494
P LAT LAP P S + L P P PP+
Sbjct: 336 P-LATPLP---------LAPPSPSAPP-----SLQTLPSPPATPPSQAPPSMTTPPMQAP 380
Query: 495 -NLSTSPRRYAALSLSETSL--------TEKGRAGEGLGRNWYVTPEITITDNDLRATER 545
+L T P SL+ SL +A LG +P + T + L + R
Sbjct: 381 PSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLG-----SPTLQATHSFLTMSPR 435
Query: 546 PSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADC 605
+ + P P PD P SL L T L P S P
Sbjct: 436 QTQASLTSPS----RPASTPPDSPPLQAPLSLPASPPLQTSL----SPAVSPLSSPLTIH 487
Query: 606 LGPQLRRLLDSRPAGSGAPALAPPRSPPASAG--SAEEPAAPGEAADASPEPSADEDDLM 663
L L P + + PP +S S + P A PS L
Sbjct: 488 PLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQ 547
Query: 664 TCS 666
T S
Sbjct: 548 TAS 550
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 47.4 bits (111), Expect = 7e-05
Identities = 40/116 (34%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 545 RPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAAD 604
R +RA + PG R P AP P S R R L L+ L++ + AG++ EP
Sbjct: 4 RGPSRASKGPGPTARAPSPGAPPPPRSPRSRPL-----LLLLLLLGACGAAGRSPEPGR- 57
Query: 605 CLGP--QLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSAD 658
LGP QL R+ S PAG P R EP APG + +P P D
Sbjct: 58 -LGPHAQLTRVPRSPPAGRAEPGGGEDRQ-----ARGTEPGAPGPSPGPAPGPGED 107
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 47.4 bits (111), Expect = 7e-05
Identities = 88/353 (24%), Positives = 126/353 (35%), Gaps = 60/353 (16%)
Query: 11 VSTVYQDIKVATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEP 70
++T+ Q + ATP +P S P ++ AL GP +P+
Sbjct: 1852 LATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKT 1911
Query: 71 PPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAAR----- 125
P + +T+ + R + A R PP L A P R G EA AR
Sbjct: 1912 PARTLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLG 1971
Query: 126 -----------AEASP----RREPAY----PALRALANELH--------PIKLQPQRGGP 158
+E+S RR+ + P LR +EL P P+RG P
Sbjct: 1972 LVRVASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRGRP 2031
Query: 159 GRVAP-LCAAAGRCAPPEPPAGPAPHVRCRLDI---KPDDAVLQHATRGSRSCGPTEAAH 214
A LC++ P GPAP R R P + + T S S P A
Sbjct: 2032 ALPAVFLCSSRCEELRAAPRQGPAP-ARQRPPAARPSPGERPARRTTSESPSRLPVRAPA 2090
Query: 215 WARPAPQFHGLTVPGPRHMALSRTP---TPSDSYCADPRAFYCDGPLPGPRDYAERRSLP 271
ARP ++P H++++R P P+ AD DG E R LP
Sbjct: 2091 -ARPETVKRYASLP---HISVARRPDGAVPAAPASADAARRSSDG---------EPRPLP 2137
Query: 272 FTTPPGPTQFFYTEE--PQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRR 322
PG T +E P R + A+ P + P + +GP PR+
Sbjct: 2138 RVAAPGTTWRRIRDEDVPHILRSTLPATALPLRGS-----TPEDAPAGPPPRK 2185
Score = 37.7 bits (86), Expect = 0.053
Identities = 42/145 (28%), Positives = 51/145 (35%), Gaps = 26/145 (17%)
Query: 531 PEITITDNDLRATERPSARAWELPGGRTRPPP--HAAPDGPTSGRQRSLEQLDELITDLV 588
P T R + P A E P GR P AAP P R + L+
Sbjct: 1519 PAAAPTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQP---------SLI 1569
Query: 589 IDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEA 648
D P S A+ S P S PA+ P PA + PG
Sbjct: 1570 ADETPPCYSLSSSASSL----------SEPEPSEPPAVHPRGREPA----VTKDPGPGGG 1615
Query: 649 ADASPEPSADEDDLMTC-SNARCRR 672
D+SP P A E+ L C S+A RR
Sbjct: 1616 RDSSPSPRAAEELLQRCISSALPRR 1640
Score = 37.0 bits (84), Expect = 0.090
Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 32/123 (26%)
Query: 75 SAVPRARTREAEPRRR---ARSKSAPRAPPGLTPAPASPPVL-----PRRGREAQRAARA 126
SA+PRA TRE R+ A SK+AP APP PA P ++ P + ++ +
Sbjct: 1531 SAIPRAFTRERPQGRKEAPAPSKAAPAAPP---PARTQPSLIADETPPCYSLSSSASSLS 1587
Query: 127 EASPRREPAYPALRALANELHPIKLQP---QRGGPGRVAPLCAAAGRCAPPEPPAGPAPH 183
E P PA +HP +P + GPG GR + P P A
Sbjct: 1588 EPEPSEPPA----------VHPRGREPAVTKDPGPG--------GGRDSSPSPRAAEELL 1629
Query: 184 VRC 186
RC
Sbjct: 1630 QRC 1632
Score = 34.3 bits (77), Expect = 0.58
Identities = 53/189 (28%), Positives = 65/189 (34%), Gaps = 39/189 (20%)
Query: 72 PPESAVPRART--REAEPRRRARSKSAPRAPPGLTPAPASPPVL-------------PRR 116
P AV R RT P RA+ K P P TP +PP L +R
Sbjct: 1782 PGVPAVLRGRTVIYVPSPAPRAQPKGTPG--PRATPRKVAPPCLAQPAAPAKVPSPGQQR 1839
Query: 117 GREAQRAARAE-----ASPRREPAYPALRALANELHPIKLQP-QRGGPGRVAPLCAAAGR 170
R R A+ + P R PA A + P + P + P+ AAG
Sbjct: 1840 SRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAG- 1898
Query: 171 CAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPA-----PQFHGL 225
A P P A P P R + QH T+ S P RPA P +
Sbjct: 1899 -ALPGPGASPVPKTPARTLL-----AKQHKTQRS----PVRIPFMQRPARRGPPPLARAV 1948
Query: 226 TVPGPRHMA 234
PGPR A
Sbjct: 1949 PEPGPRGRA 1957
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 47.0 bits (110), Expect = 9e-05
Identities = 71/260 (27%), Positives = 87/260 (33%), Gaps = 48/260 (18%)
Query: 58 ALDGPAMETLPEPPPPES---------AVPRARTREAEPRRRARSKSAPRAPPGLTPAPA 108
A G + P+ PP S A RA T E + ++ P P L PAP
Sbjct: 176 AAPGRRLRGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGPGPPARLPPAPP 235
Query: 109 SPPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAA 168
PP+ P AR R P R L E KL P PLC +
Sbjct: 236 GPPLRP---------ARPHNPTSRGPG----RLLTCEPPSRKLPPP-------LPLCRSR 275
Query: 169 GRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVP 228
APP P R R+ P + RGSR+ A R A LT+
Sbjct: 276 WVLAPP-----PTVRPRLRVLTPPFTLLCALPERGSRTPSTRSAVLVDRVAGLGTELTLT 330
Query: 229 GPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQ 288
A P S+ A RAF PLP P + SLP G +P+
Sbjct: 331 PSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVP--SLPSPQAQGQA----VRQPR 384
Query: 289 GFRGSFA--------ASPGP 300
R + A SPGP
Sbjct: 385 LLRAALALGAPRGRTPSPGP 404
Score = 32.3 bits (72), Expect = 2.2
Identities = 30/74 (40%), Positives = 34/74 (45%), Gaps = 21/74 (28%)
Query: 817 SVAVGPGT------APPGTPALPAPAPRSHGPTVRKFAKVALAAGSPAR--PPP---ARS 865
SV GPG APPG P PA R H PT R ++ L P+R PPP RS
Sbjct: 219 SVRNGPGPPARLPPAPPGPPLRPA---RPHNPTSRGPGRL-LTCEPPSRKLPPPLPLCRS 274
Query: 866 REPDMETLILTPPP 879
R +L PPP
Sbjct: 275 R------WVLAPPP 282
>gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
sapiens]
Length = 347
Score = 46.6 bits (109), Expect = 1e-04
Identities = 66/240 (27%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 51 RSFDFLEALDGPAMETLPEP--PPPESAVPRARTREAEPRR-RARSKSAPRAP------- 100
RSF A G A PEP +S P++R E++P R +S+ APR+
Sbjct: 112 RSFTHAGARAGRAS---PEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSG 168
Query: 101 PGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGR 160
G + A+ P RR + P +E + + R L P P R
Sbjct: 169 RGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCL-----PAPAAFSAAAPAR 223
Query: 161 VAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAP 220
P C G AP PP+ P + L ++P + RG S G E A
Sbjct: 224 RPPACLPEGEDAPVAPPSSARPALPSFL-LRPSGYLAARRQRGPGS-GAAETGFRGSCAG 281
Query: 221 QFHGLTV---PGPRHMALSRTPTPSD--SYCADPRAFYCDG---PLPGPRDYAE-RRSLP 271
GL + PG H+ + T S+ S + PR + G P P P + E RR+LP
Sbjct: 282 CGRGLRIQSHPGTTHLHQGASFTSSEPLSGISSPRGVWASGCLAPFPQPLIHGEQRRALP 341
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 46.6 bits (109), Expect = 1e-04
Identities = 67/250 (26%), Positives = 81/250 (32%), Gaps = 40/250 (16%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPA-METLPEPPPPESAVPRAR 81
PGP P A N H + +GPA + LP+P P + +
Sbjct: 184 PGPGKPAGPGAAQTLN-GSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPP 242
Query: 82 TREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRA 141
A + S P AP PA A PP P A A+ R P +PA
Sbjct: 243 FVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPP-----------APATLARPPGHPAGPP 291
Query: 142 LANELHPIKLQPQRGGPGRVAPLCAAA--------GRCAPPEPPAGPAPHVRCRLDIKPD 193
A P Q GG AP A A G+ P A PAP V+ +
Sbjct: 292 TAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVV 351
Query: 194 DAVLQHA----------TRGSRSCGPTEAAHWARPA---PQFHGLTVPGPRHMA------ 234
A A T S GPT PA P G P+ A
Sbjct: 352 QAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQS 411
Query: 235 LSRTPTPSDS 244
LSRTPT + S
Sbjct: 412 LSRTPTATTS 421
Score = 44.7 bits (104), Expect = 4e-04
Identities = 83/291 (28%), Positives = 99/291 (34%), Gaps = 54/291 (18%)
Query: 95 SAPRAP----PGLTPAPASPPVLPRRGREAQRAARAEASPRRE--PAYPALRALANELHP 148
+ P AP PG P P PP R SPRR PA PA A +L P
Sbjct: 73 AGPAAPAEGAPGAAPEP--PPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAA--KLRP 128
Query: 149 IKLQPQRGGPGRVAPLCAAAGRCAPPEP-PAGPAPHVRCRLDIKP-DDAVLQHATRGSRS 206
P G G AP+ AAA A PEP PAGPA KP A L A R
Sbjct: 129 ----PPEGSAGSCAPVPAAAAVAAGPEPAPAGPA---------KPAGPAAL--AARAGPG 173
Query: 207 CGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAE 266
GP P P PGP A + A + + P +
Sbjct: 174 PGPGPG-----PGPG------PGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGP 222
Query: 267 RRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSP------ 320
LP P P T F G+ AA P P + P P+ + P P
Sbjct: 223 AALLPLPKPAAPGTVIQTPP---FVGA-AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPA 278
Query: 321 --RRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPY----GPRYVPEEP 365
R G+ AG P PP+ + G + A P GP V +P
Sbjct: 279 TLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP 329
Score = 44.7 bits (104), Expect = 4e-04
Identities = 91/369 (24%), Positives = 115/369 (31%), Gaps = 38/369 (10%)
Query: 24 GPASKCSPCERSVARPAEPAP--FNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRAR 81
GP P R PA PAP R PA + P P A P
Sbjct: 101 GPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKP 160
Query: 82 TREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEAS--PRREPAYPAL 139
A RA P PG P P P G A + A+ A PA+
Sbjct: 161 AGPAALAARAGPGPGPGPGPGPGPGPGKP-----AGPGAAQTLNGSAALLNSHHAAAPAV 215
Query: 140 RALANELHPIKLQPQRGGPGRV---APLCAAAGRCAP--PEPPAGPAPHVRCRLDIKPDD 194
+ N + P+ PG V P AA AP P PPA PAP P
Sbjct: 216 SLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPP 275
Query: 195 AVLQHATRGSRSCGPTEAAHWARP--APQFHGL--TVPGPRHMA-----LSRTPTPSDSY 245
A A GP AA P A Q G P P A +S P P +
Sbjct: 276 APATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAA 335
Query: 246 CADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAY 305
A P PG + + +R + P T P S GPT
Sbjct: 336 AA---------PAPGVKAESPKRVVQAAPPAAQT--LAASGPASTAASMVI--GPTMQGA 382
Query: 306 YPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEP 365
P P + +P + AG V T + P+ + G PR +P+ P
Sbjct: 383 LPSPAAVPPPAPGTPTGLPKGAAGAV-TQSLSRTPTATTSGIRATLTPTVLAPR-LPQPP 440
Query: 366 RAHSTARPF 374
+ + + F
Sbjct: 441 QNPTNIQNF 449
Score = 41.2 bits (95), Expect = 0.005
Identities = 142/574 (24%), Positives = 181/574 (31%), Gaps = 122/574 (21%)
Query: 119 EAQRAARAEASPRREPAYPALRALANEL---HPIKLQPQ-RGGPGRVAPLCAAAGRCAPP 174
E+Q AA A P P +RA A H + P G G AP A G AP
Sbjct: 30 ESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPG-AAPE 88
Query: 175 EPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMA 234
PPAG A +P Q S P A PAP L P P A
Sbjct: 89 PPPAGRA---------RPGGGGPQRPGPPS----PRRPLVPAGPAPPAAKLR-PPPEGSA 134
Query: 235 LSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSF 294
S P P+ A GP P P A+ P GP +
Sbjct: 135 GSCAPVPA-------AAAVAAGPEPAPAGPAK--------PAGPAAL-----------AA 168
Query: 295 AASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGL 354
A PGP P P P GP P + G G +T S++ AP +
Sbjct: 169 RAGPGPG-----PGPGPG---PGPGPGKPAG--PGAAQTLNGSAALLNSHHAAAPAVSLV 218
Query: 355 PYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRSSPAWADWGPRPYRTLQV 414
GP + P+ + T F A P S PA P P
Sbjct: 219 NNGPAALLPLPKPAAPGTVIQTPPF-----VGAAAPPAPAAPSPPA----APAPAAPAAA 269
Query: 415 VPPSDPDPLLASWHGGTGTSPPRLA-----TDSRHYSRSWDNILAPGPRREDPLGRGRSY 469
PP P P + G PP A + S AP P P G S
Sbjct: 270 PPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP--AGVSG 327
Query: 470 ENLLGREVREPR-GVSPEGRR------PPVVVNLSTSPRRYAALSL-------------- 508
+ G P GV E + PP L+ S A S+
Sbjct: 328 QPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPA 387
Query: 509 --------SETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRP 560
+ T L KG AG + ++ TP T T + +RAT P+ A LP
Sbjct: 388 AVPPPAPGTPTGL-PKGAAG-AVTQSLSRTP--TATTSGIRATLTPTVLAPRLP------ 437
Query: 561 PPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAG 620
P PT+ + L L+ R GQ L Q++ ++P
Sbjct: 438 ---QPPQNPTNIQNFQLPPGMVLV-------RSENGQLLMIPQQALA-QMQAQAHAQPQT 486
Query: 621 SGAPALAPPRS-PPASAGSAEEPAAPGEAADASP 653
+ AP A P S PP + + P P A +P
Sbjct: 487 TMAPRPATPTSAPPVQISTVQAPGTPIIARQVTP 520
Score = 40.0 bits (92), Expect = 0.011
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 588 VIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAE---EPAA 644
VI + P G A+ PA P + PA + APA APP PPA A A PA
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSPP------AAPAPA-APAAAPPPPPPAPATLARPPGHPAG 289
Query: 645 PGEAADASPEPSADED 660
P AA A P P+A ++
Sbjct: 290 PPTAAPAVPPPAAAQN 305
Score = 35.0 bits (79), Expect = 0.34
Identities = 39/113 (34%), Positives = 44/113 (38%), Gaps = 26/113 (23%)
Query: 546 PSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADC 605
P+ A P P AAP+ P +GR +RP G P
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGR-----------------ARPGGGGPQRPGP-- 107
Query: 606 LGPQLRRLLDSRPAGSGAPALAPPRSPP-ASAGS-AEEPAAPGEAADASPEPS 656
P RR L PAG PA A R PP SAGS A PAA AA P P+
Sbjct: 108 --PSPRRPLV--PAGPAPPA-AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPA 155
Score = 34.7 bits (78), Expect = 0.45
Identities = 28/78 (35%), Positives = 29/78 (37%), Gaps = 13/78 (16%)
Query: 816 VSVAVGPGTAPPGTPALPAPAPRSHGPTVRKFAKVALAA--GSPARPPPARSREPDMETL 873
V A P A P PA PAPA + P A LA G PA PP A
Sbjct: 244 VGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP-------- 295
Query: 874 ILTPPPGTAGLDQDGEAG 891
PPP A G AG
Sbjct: 296 -AVPPPAAA--QNGGSAG 310
Score = 30.8 bits (68), Expect = 6.5
Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 591 SRPTAGQASEPAADCLGPQLRRLLDSRPAG--SGAPALAPPRSPPA------SAGSAEEP 642
S P A + PAA P +RP G +G P AP PPA SAG+A P
Sbjct: 256 SPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAP 315
Query: 643 A-APGEAADASPEP 655
A A G A S +P
Sbjct: 316 APAAGGPAGVSGQP 329
Score = 30.4 bits (67), Expect = 8.4
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 17/90 (18%)
Query: 821 GPGTAPPGTP------------ALPAPAPRSHGPT-VRKFAKVALAAGSPARPPPARSRE 867
GP TA P P A PAPAP + GP V AA +PA P ++
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPA--PGVKAES 346
Query: 868 PDMETLILTPPPGTAGLDQDGEAGRRAREV 897
P + ++ PP L G A A V
Sbjct: 347 P--KRVVQAAPPAAQTLAASGPASTAASMV 374
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.6 bits (109), Expect = 1e-04
Identities = 57/228 (25%), Positives = 77/228 (33%), Gaps = 50/228 (21%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRART 82
PGP + P ++ P P ++H L L PA LP+ P ++ P+
Sbjct: 472 PGPQRQGPPLQQ------RPPPQGQQH------LSGLGPPAGSPLPQRLPSPTSAPQQPA 519
Query: 83 REAEPRRRARSKSA------PRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAY 136
+A P + + + + P APP P PASP SP+R+
Sbjct: 520 SQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASP------------------SPQRQAGP 560
Query: 137 PALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAV 196
P + P + PG R PP+ P GPA R P
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPG-------GQQRQGPPQKPPGPAGPTRQASQAGPVPRT 613
Query: 197 LQHATRGSRSCGPTEAAHWARPAPQF---HGLTVPGPRHMALSRTPTP 241
T+ R GP A RP PQ VP P A P P
Sbjct: 614 GPPTTQQPRPSGPGPA---GRPKPQLAQKPSQDVPPPATAAAGGPPHP 658
Score = 42.0 bits (97), Expect = 0.003
Identities = 66/259 (25%), Positives = 100/259 (38%), Gaps = 37/259 (14%)
Query: 84 EAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGRE-AQRAARAEASPRREPAYPALRAL 142
+A PR+R R S R G TP+P + P+ + ++ A A+ P+ P P
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPG-PGP 474
Query: 143 ANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATR 202
+ P++ +P G ++ L AG P P P+P + Q R
Sbjct: 475 QRQGPPLQQRPPPQGQQHLSGLGPPAG---SPLPQRLPSPTSAPQQPASQAAPPTQGQGR 531
Query: 203 GSRSC-----GPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGP 257
SR P A A P+PQ R ++S P P + A P GP
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVS-GPAPPKASGAPPGGQQRQGP 590
Query: 258 ---LPGP----RDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPY 310
PGP R ++ +P T PP T++P+ + PGP A P+P
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPP------TTQQPR------PSGPGP---AGRPKPQ 635
Query: 311 ----PSEELSGPSPRRMGG 325
PS+++ P+ GG
Sbjct: 636 LAQKPSQDVPPPATAAAGG 654
Score = 35.0 bits (79), Expect = 0.34
Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 18/120 (15%)
Query: 554 PGGRTRPPPHAAPDGPTSGRQRSLEQLDELI----TDLVIDSRPTAGQ------------ 597
P + RPPP P P G QR L + + P AG
Sbjct: 455 PPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSA 514
Query: 598 ASEPAADCLGPQLRRLLDSRP--AGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEP 655
+PA+ P + SRP G GAP A P + P+ A P A + + + P P
Sbjct: 515 PQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAP 574
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 1e-04
Identities = 57/228 (25%), Positives = 77/228 (33%), Gaps = 50/228 (21%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRART 82
PGP + P ++ P P ++H L L PA LP+ P ++ P+
Sbjct: 472 PGPQRQGPPLQQ------RPPPQGQQH------LSGLGPPAGSPLPQRLPSPTSAPQQPA 519
Query: 83 REAEPRRRARSKSA------PRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAY 136
+A P + + + + P APP P PASP SP+R+
Sbjct: 520 SQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASP------------------SPQRQAGP 560
Query: 137 PALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAV 196
P + P + PG R PP+ P GPA R P
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPG-------GQQRQGPPQKPPGPAGPTRQASQAGPVPRT 613
Query: 197 LQHATRGSRSCGPTEAAHWARPAPQF---HGLTVPGPRHMALSRTPTP 241
T+ R GP A RP PQ VP P A P P
Sbjct: 614 GPPTTQQPRPSGPGPA---GRPKPQLAQKPSQDVPPPATAAAGGPPHP 658
Score = 45.4 bits (106), Expect = 3e-04
Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 84 EAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGRE-AQRAARAEASPRREPAYPALRAL 142
+A PR+R R S R G TP+P + P+ + ++ A A+ P+ P P
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPG-PGP 474
Query: 143 ANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATR 202
+ P++ +P G ++ L AG P P P+P + Q R
Sbjct: 475 QRQGPPLQQRPPPQGQQHLSGLGPPAG---SPLPQRLPSPTSAPQQPASQAAPPTQGQGR 531
Query: 203 GSRSC-----GPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGP 257
SR P A A P+PQ R ++S P P + A P GP
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVS-GPAPPKASGAPPGGQQRQGP 590
Query: 258 ---LPGP----RDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPY 310
PGP R ++ +P T PP T++P+ + PGP A P+P
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPP------TTQQPR------PSGPGP---AGRPKPQ 635
Query: 311 ----PSEELSGPSPRRMGGYYAGEVRTFPIQEPP 340
PS+++ P+ GG +++ P Q P
Sbjct: 636 LAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
Score = 35.0 bits (79), Expect = 0.34
Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 18/120 (15%)
Query: 554 PGGRTRPPPHAAPDGPTSGRQRSLEQLDELI----TDLVIDSRPTAGQ------------ 597
P + RPPP P P G QR L + + P AG
Sbjct: 455 PPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSA 514
Query: 598 ASEPAADCLGPQLRRLLDSRP--AGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEP 655
+PA+ P + SRP G GAP A P + P+ A P A + + + P P
Sbjct: 515 PQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAP 574
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 46.6 bits (109), Expect = 1e-04
Identities = 80/277 (28%), Positives = 93/277 (33%), Gaps = 54/277 (19%)
Query: 96 APRAPPGLTPAPASPPVLPRRGR--EAQRAAR---------AEASPRREPAYPALRALAN 144
+PR P P PP PR G EA AAR A P P P L
Sbjct: 132 SPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLP 191
Query: 145 ELHPIKLQPQRGGPGRVA----PLCAAAGRCAPPEPPAGPAP--------HVRCRLDIKP 192
PIK P PG + P+ A CAPP PP P P V +KP
Sbjct: 192 SSSPIK-TPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKP 250
Query: 193 DDAVLQHATRGS-----RSCG-PTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYC 246
A L CG P A A PA P P P P + C
Sbjct: 251 QLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPP--------PLPPYASC 302
Query: 247 ADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYY 306
+ PRA PLPG +E T PP P + + P G+ A P P
Sbjct: 303 S-PRASLPAPPLPGVNSSSE------TPPPLPPKSPSFQAPPQKAGA-QALPAP------ 348
Query: 307 PRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRS 343
P P +R G AG + P PP+RS
Sbjct: 349 --PAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARS 383
Score = 43.5 bits (101), Expect = 0.001
Identities = 43/169 (25%), Positives = 58/169 (34%), Gaps = 35/169 (20%)
Query: 26 ASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAV-------P 78
A++ +P +V P P P P LP P P S + P
Sbjct: 161 AARTAPPRPNVPAPPPPTP----------------PPPPPPLPPPLPSSSPIKTPLVSPP 204
Query: 79 RARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPA 138
T+ P AP PP P P +PP LP + +A + + +P P P
Sbjct: 205 GPLTKGNLPVVAPPVPCAPPPPP--PPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPP 262
Query: 139 LRALANELHPIKLQPQRGGPG-RVAPLCAAAGRCAPPEPPAGPAPHVRC 186
P+ L P G PG + P A PP PP P+ C
Sbjct: 263 ---------PLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASC 302
Score = 38.1 bits (87), Expect = 0.040
Identities = 51/211 (24%), Positives = 71/211 (33%), Gaps = 47/211 (22%)
Query: 6 PPDLLVSTVYQDIKVATPGPASK-----------CSPCERSVARPAEPAPFNKRHCRSFD 54
PP L S+ + V+ PGP +K C+P P P P S
Sbjct: 187 PPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDK 246
Query: 55 FLEALDGPAMETLPEPPPP-----ESAVPRARTREAEPRRRARSKSAPRAP--------- 100
++ P LP PPP P + A P + A+ AP P
Sbjct: 247 AVKPQLAPLH--LPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSP 304
Query: 101 ---------PGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKL 151
PG+ + +PP LP + Q A +A + PA PA P
Sbjct: 305 RASLPAPPLPGVNSSSETPPPLPPKSPSFQ-APPQKAGAQALPAPPA----PPGSQPFLQ 359
Query: 152 QPQRGGPGRVAPLCAAAGRCAPPEPPAGPAP 182
+ + G PG A G+ PP P +P
Sbjct: 360 KKRHGRPG------AGGGKLNPPPAPPARSP 384
Score = 34.7 bits (78), Expect = 0.45
Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 12/82 (14%)
Query: 802 AGRLYEPAECFLLSVSVAVGPGTAPPGTPALPAPAPRSHGPTVRKFAKVALAAGSPARPP 861
+G L PA L + S A G P P +PAP P + P P PP
Sbjct: 141 SGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPP------------PPPLPP 188
Query: 862 PARSREPDMETLILTPPPGTAG 883
P S P L+ P P T G
Sbjct: 189 PLPSSSPIKTPLVSPPGPLTKG 210
Score = 31.2 bits (69), Expect = 5.0
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Query: 826 PPGTPALPAPAPRSHGPTVRKFAKVALAAGSPARPPPARSREPDMETLILTPPPGTAGLD 885
PP P LP P P P P PP A D +L P G + L
Sbjct: 5 PPPPPPLPPPPPPLGAP--------------PPPPPSAPPVSTDTSSLRRADPKGRSALL 50
Query: 886 QDGEAGRRAREVAFIH 901
D + G R R+V I+
Sbjct: 51 ADIQQGTRLRKVTQIN 66
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 46.6 bits (109), Expect = 1e-04
Identities = 63/209 (30%), Positives = 73/209 (34%), Gaps = 37/209 (17%)
Query: 148 PIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSC 207
P ++ QRG R APL AA AP P+G P +P L A
Sbjct: 30 PQRVPGQRGRGARAAPLVPAASASAPQRGPSGILPAA------EPTICSLHQAWG----- 78
Query: 208 GPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAER 267
GP A PA G PGP P P + P GP+PGP
Sbjct: 79 GPGCRAQKGIPAALSPG---PGP-----IPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSP 130
Query: 268 RSLPFTTP-PGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYP---SEELSGPSPRRM 323
P P GP Q P FRG PGP P P P S SGP+P +
Sbjct: 131 IPAPIPGPISGPVQI-----PGPFRGPI---PGPISG---PAPIPGPISGPFSGPNPGPI 179
Query: 324 GGYYAGEVR---TFPIQEPPSRSYYGEAP 349
G G + + PI P S G P
Sbjct: 180 PGPNPGPIPGPISGPIPGPISVPIPGPIP 208
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.2 bits (108), Expect = 1e-04
Identities = 65/224 (29%), Positives = 77/224 (34%), Gaps = 28/224 (12%)
Query: 65 ETLPEPPPPESAVPRARTREAEPRRRARSKSA--PRAPPGLTPAPASP------PVLPRR 116
E PEPPPP S RRR S+ A P PP PA P P LP
Sbjct: 1158 EAGPEPPPPLSVYHNGT---GTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPP 1214
Query: 117 GREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEP 176
EA++ A+ SP+ P + + K P PG +P A PP
Sbjct: 1215 EGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPL---PGPGSPEVKRAHGTPPPVS 1271
Query: 177 PAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALS 236
P P P KP AV A S S GP+ A AR P P + S
Sbjct: 1272 PKPPPPPTA----PKPVKAV---AGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGAS 1324
Query: 237 RTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQ 280
PS P A P PR A + PP P +
Sbjct: 1325 PAKPPS------PGAPALHVPAKPPR-AAAAAAAAAAAPPAPPE 1361
Score = 44.3 bits (103), Expect = 6e-04
Identities = 138/650 (21%), Positives = 202/650 (31%), Gaps = 141/650 (21%)
Query: 58 ALDGPAMETLPEPPPPESAVPRARTREAEPRRRARS-------KSAPRAPPGLTPAPASP 110
A GPA +P P P A P++RA S S P L PA A P
Sbjct: 847 AAPGPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGP 906
Query: 111 PVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGR 170
+R + RA A + R+ + + P K P P R + A+A
Sbjct: 907 YATVQRRVGRSHSVRAPAGADKN----VNRSQSFAVRPRKKGPPPPPPKRSSSALASANL 962
Query: 171 CAPPEPPAGP-----APHVRCRL--------------DIKPDDAVLQHATRGSRSCGPTE 211
P P A P +CR +K A+L+ ++ G
Sbjct: 963 ADEPVPDAEPEDGLLGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGG------- 1015
Query: 212 AAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLP 271
AR P+ H P PR +P P + + PG RR+L
Sbjct: 1016 GGRAARRPPEGH----PTPR----PASPEPGRVATVLASVKHKEAIGPGGEVVNRRRTL- 1066
Query: 272 FTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEV 331
GP G + PG + D P P+ + PR AG
Sbjct: 1067 ----SGPV--------TGLLATARRGPGESAD---PGPFVEDGTGRQRPRGPSKGEAG-- 1109
Query: 332 RTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLART 391
++ PP A R + + + TE D + R
Sbjct: 1110 ----VEGPPLAKVEASATL-------KRRIRAKQNQQENVKFILTES-------DTVKR- 1150
Query: 392 YPHPRSSPAWADWGPRPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYSRSWDN 451
P++ A GP P P L+ +H GTGT R A++ ++
Sbjct: 1151 --RPKAKEREA--GPEP------------PPPLSVYHNGTGTVRRRPASE-----QAGPP 1189
Query: 452 ILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPV---VVNLSTSPRRYAALSL 508
L P P +P ++ L P G + + +PPV V P+ + +
Sbjct: 1190 ELPPPPPPAEPPPTDLAHLPPL----PPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTP 1245
Query: 509 SETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPDG 568
+ + G + R P ++ +P LP G P P
Sbjct: 1246 TSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSP-----A 1300
Query: 569 PTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPAL-- 626
P+ RQ P A A P P ++P GAPAL
Sbjct: 1301 PSPARQ------------------PPAALAKPPGT----PPSLGASPAKPPSPGAPALHV 1338
Query: 627 --APPRSPPASAGSAEEPAAPGEAADASPEPSADEDDLMTCSNARCRRTE 674
PPR+ A+A +A P AP E A ++ C A + E
Sbjct: 1339 PAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAALQAVE 1388
Score = 43.1 bits (100), Expect = 0.001
Identities = 55/194 (28%), Positives = 67/194 (34%), Gaps = 39/194 (20%)
Query: 39 PAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESA-------VPRAR-----TREAE 86
PAEP P + H L L P E PP S VP+ + T +
Sbjct: 1197 PAEPPPTDLAH------LPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKV 1250
Query: 87 PRRRARSKSAPRA---PPGLTPAPASPPVLPR--RGREAQRAARAEASPRREPAYPALRA 141
P S RA PP ++P P PP P+ + + A SP PA A
Sbjct: 1251 PLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAA 1310
Query: 142 LANE--------LHPIKLQPQRGGPGRVAPL-------CAAAGRCAPPEPPAGPAPHVRC 186
LA P K P G P P AAA APP PP G +P
Sbjct: 1311 LAKPPGTPPSLGASPAK-PPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSA 1369
Query: 187 RLDIKPDDAVLQHA 200
R ++ A L A
Sbjct: 1370 RQKLEETSACLAAA 1383
Score = 38.5 bits (88), Expect = 0.031
Identities = 170/703 (24%), Positives = 213/703 (30%), Gaps = 150/703 (21%)
Query: 39 PAEPAPFNKRHCRSFDFLE---------ALDGPAMETLPEPPPPESAVP---RARTRE-A 85
P EP P + + + F + A+ GPA E P P S +P RA TR+ +
Sbjct: 636 PPEPTPADCQSPKMTTFQDSELSDELQAAMTGPA-EVGPTTEKPSSHLPPTPRATTRQDS 694
Query: 86 EPRRRARSKSAPR-----APPGLT--------------PAPASPPVLPRRGREAQRAARA 126
RAR S+ + PPG + PAP +PP R GR RA
Sbjct: 695 SLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEGPAPGTPPREARPGRHGHSIKRA 754
Query: 127 EASP----RREPAYPALRALANELHPIKLQP----QRGGPGRVAPLCA-----------A 167
P R+ P P K +P GGP AP A
Sbjct: 755 SVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPT 814
Query: 168 AGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRS----------CGPTEA-AHWA 216
+P P P + +P + + A G C P EA A
Sbjct: 815 ERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPG 874
Query: 217 RPAPQFHGLTVPGPRHMALSR----TPTPSDSYCADPRAFYCDGPL--PGPRDYAERRSL 270
RP + H L R P + Y R + P D RS
Sbjct: 875 RPKKRAHSLNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQ 934
Query: 271 PFTTPP---GPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPR-RMGGY 326
F P GP P R S A + D P P + L G + R
Sbjct: 935 SFAVRPRKKGP------PPPPPKRSSSALASANLADEPVPDAEPEDGLLGVRAQCRRASD 988
Query: 327 YAGEVRTFPIQEPPSRSYYGEAPRAYGLPYGPRYVPEEPRAHSTARPFYTEDFGRYRERD 386
AG V T S + E G G R P H T RP E R
Sbjct: 989 LAGSVDTGSAGSVKSIAAMLELSSIGG---GGRAARRPPEGHPTPRPASPEP---GRVAT 1042
Query: 387 VLARTYPHPRSSPAWADWGPRPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHYS 446
VLA P R RTL +G LAT R
Sbjct: 1043 VLASVKHKEAIGPGGEVVNRR--RTL------------------SGPVTGLLATARRGPG 1082
Query: 447 RSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSP-----EGRRPPVVVNLSTSPR 501
S D PGP ED GR R PRG S EG V +T R
Sbjct: 1083 ESAD----PGPFVEDGTGRQR------------PRGPSKGEAGVEGPPLAKVEASATLKR 1126
Query: 502 RYAA---------LSLSETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWE 552
R A L+E+ ++ + P +++ N R A
Sbjct: 1127 RIRAKQNQQENVKFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQA 1186
Query: 553 LPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLRR 612
P PPP A P PT L L L P G+A +PA + P+
Sbjct: 1187 GPPELPPPPPPAEPP-PT-----DLAHLPPL--------PPPEGEARKPAKPPVSPK-PV 1231
Query: 613 LLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEP 655
L P G+P + P GS E A G SP+P
Sbjct: 1232 LTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKP 1274
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 46.2 bits (108), Expect = 1e-04
Identities = 38/117 (32%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 68 PEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAE 127
P PPPP ++ P P AR + AP PP P A PP P R A
Sbjct: 289 PPPPPPHNSGP--------PPPPARGRGAPPPPPSRAPTAAPPPPPPSR----PSVAVPP 336
Query: 128 ASPRR--EPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAP 182
P R P PAL + A GP P G APP PP P P
Sbjct: 337 PPPNRMYPPPPPALPSSA-----------PSGPPPPPPSVLGVGPVAPPPPPPPPPP 382
Score = 34.3 bits (77), Expect = 0.58
Identities = 28/77 (36%), Positives = 30/77 (38%), Gaps = 15/77 (19%)
Query: 817 SVAVGPGTA----PPGTPALPAPAPRSHGPTVRKFAKVALAAGSPARPPPARSREPDMET 872
SVAV P PP PALP+ AP P V A P PPP P
Sbjct: 331 SVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPP---- 386
Query: 873 LILTPPPGTAGLDQDGE 889
PPP GL DG+
Sbjct: 387 ----PPP---GLPSDGD 396
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 46.2 bits (108), Expect = 1e-04
Identities = 113/440 (25%), Positives = 149/440 (33%), Gaps = 78/440 (17%)
Query: 73 PESAVPRARTREAEPRRRARSKSAPRAPP--GLTPAPASPPVLPRRGREAQRAARAEASP 130
P A P T + +PR+ A S P PP TPA + G +AQ EA P
Sbjct: 6 PRGAPPPTMTGDLQPRQVASSPGHPSQPPLEDNTPATRTTKGAREAGGQAQAMELPEAQP 65
Query: 131 RR----EPAYPALRALANELHPIKLQPQRGGPGRVAPLCA---AAGRCAPPEPPAG---- 179
R+ E P+LR A P K + PGR +PL A AGR A PP
Sbjct: 66 RQARDGELKPPSLRGQAPSSTPGKRGSPQTPPGR-SPLQAPSRLAGR-AEGSPPQRYILG 123
Query: 180 -PAPHVRCRLDIKPDDAVLQHA-------TRGSRSCGPTEAA---HWARPAPQ---FHGL 225
+ + LD P++ L+ A +G + P A+PA + FH
Sbjct: 124 IASSRTKPTLDETPENPQLEAAQLPEVDTPQGPGTGAPLRPGLPRTEAQPAAEELGFHRC 183
Query: 226 TVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTE 285
P + +PS A PR P PGP L + P
Sbjct: 184 FQEPPSSFTSTNYTSPS----ATPRP-----PAPGPPQSRGTSPLQPGSYPEYQASGADS 234
Query: 286 EPQGFRGSFAASPGPTFDA--YYPRPYPSEELSGPSPRRMG------GYYAGEVRTFPIQ 337
P SF PG F P P P G SPR + + + FP
Sbjct: 235 WPPAAENSF---PGANFGVPPAEPEPIPKGSRPGGSPRGVSFQFPFPALHGASTKPFPAD 291
Query: 338 EPPSRSYYGEAPRAYGLPY----------GPRY-VPEEPRAHSTARPFYTEDFGRYRERD 386
G A+ P GP Y +P +P A S + + G R D
Sbjct: 292 VAGHAFTNGPLVFAFHQPQGAWPEEAVGTGPAYPLPTQP-APSPLPCYQGQPGGLNRHSD 350
Query: 387 VLARTYPHPRSSPAWADWGPRPY---------RTLQVVPPSDPDPLLASWHGGTGTSPPR 437
+ SSP A PRP+ + L PPS D L S G + P R
Sbjct: 351 LSGAL-----SSPGAAHSAPRPFSDSLHKSLTKILPERPPSAQDG-LGSTRGPPSSLPQR 404
Query: 438 LATDSRHYSRSWDNILAPGP 457
+ + D +PGP
Sbjct: 405 HFPGQAYRASGVDT--SPGP 422
Score = 31.6 bits (70), Expect = 3.8
Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 21/120 (17%)
Query: 19 KVATPGPASKCSPCE--RSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESA 76
K PGPA S R+ + P +P ++ L P + P PPP E
Sbjct: 3791 KGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKPRPPPSEQ- 3849
Query: 77 VPRARTREAEP----RRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRR 132
R+AEP R+ K+ P+ P L P P+RG A AE R
Sbjct: 3850 ------RKAEPGHTQRKDRLGKAFPQGRPLLRP--------PKRGTAVHGAEPAEPHTHR 3895
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 46.2 bits (108), Expect = 1e-04
Identities = 111/465 (23%), Positives = 156/465 (33%), Gaps = 90/465 (19%)
Query: 76 AVPRART---REAEPRRRARSKSAPRAP-PGLTPAPASPPVLPRRGREAQRAARAEASPR 131
AVP ++T E+ RR +R P +TP P ++ + ++ + E
Sbjct: 358 AVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVE 417
Query: 132 REPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIK 191
EP AL A A+ R P AAA P +P ++ + K
Sbjct: 418 EEPF--ALGAEASNFQQEPAPRDRASP-------AAAEEVVPEWASCLKSPRIQAKPKPK 468
Query: 192 PDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMA-LSRTPTPSDSYCADPR 250
P+ + + + +G A +AR + + H L+R P+P+ S P
Sbjct: 469 PNQNLSEASGKG--------AELYARRQSRMEKYVIESSSHTPELARCPSPTMSL---PS 517
Query: 251 AFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYP-RP 309
++ PG A R P TPP Y E R P PT Y RP
Sbjct: 518 SWKYPTNAPGAFRVASRS--PARTPPASLYHGYLPENGVLR------PEPTKQPPYQLRP 569
Query: 310 Y-----PSEELSGPSPRRMG-----------GYYAGEVRTFPIQEPPSRSYYGE------ 347
P +E + SPR G + P PSRS G
Sbjct: 570 SLFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQ 629
Query: 348 ---APRAYGLPYGPRYVPEEP------RAHSTARP-FYTEDFGRYRE--RDVLARTYPH- 394
P A PYG P P RA RP F T + G + R+ L + P
Sbjct: 630 DSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWT 689
Query: 395 ------PRSSPAWAD---WGPRPYRTLQVVPPSDPDPLLASWHGGTGTSPPRLATDSRHY 445
P S W W P ++ PP P P ++ SP R T++R
Sbjct: 690 PGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPP 749
Query: 446 SRSWDNILAPGPRREDPLGRGRSYENLLGREVREPRGVSPEGRRP 490
SR +LA R+ N R+ PR E RP
Sbjct: 750 SRQLQALLA------------RNIINAARRKSASPRSAGAENPRP 782
Score = 43.9 bits (102), Expect = 7e-04
Identities = 58/237 (24%), Positives = 76/237 (32%), Gaps = 35/237 (14%)
Query: 20 VATPGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPP------- 72
++ P+ SP + RP+ F+ R+ +EA D E+LP PP
Sbjct: 645 ISPVSPSRAWSPRAKQAPRPS----FSTRNAG----IEAQD--RRESLPTSPPWTPGASR 694
Query: 73 -PESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPR 131
P S EP R + S PP L P P P R R P
Sbjct: 695 PPSSLDGWVSPGPWEPGRGSSMSS----PPPLPPPPPMSPSWSERSVSPLRPETEARPPS 750
Query: 132 REPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIK 191
R+ R + N P+ G P PP PP P P +R +
Sbjct: 751 RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAP-PPPPPPPPPPPRMRSPQPAR 809
Query: 192 PDDAVLQHAT-----RGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSD 243
P A + A R GP+ P P PR R+PT SD
Sbjct: 810 PGSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLP-------APPRPFLYRRSPTDSD 859
Score = 42.0 bits (97), Expect = 0.003
Identities = 83/336 (24%), Positives = 113/336 (33%), Gaps = 74/336 (22%)
Query: 27 SKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRARTREAE 86
+K SP S A+P+ S D + L A+ P P P + P T
Sbjct: 581 AKVSPRAASPAKPS-----------SLDLVPNLPKGALPPSPALPRPSRSSPGLYT---S 626
Query: 87 PRRRARSKSAPRAPPGLTPAPASPP-VLPRRGREAQRA------ARAEASPRRE--PAYP 137
P + + +A P G +P SP R ++A R A EA RRE P P
Sbjct: 627 PGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSP 686
Query: 138 ALRALANELHPIKLQ----PQRGGPGRVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPD 193
A+ P L P PGR + + + PP PP P+ R ++P+
Sbjct: 687 PWTPGASR-PPSSLDGWVSPGPWEPGRGSSMSSPPP--LPPPPPMSPSWSERSVSPLRPE 743
Query: 194 DAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFY 253
TEA P+ Q L + A ++ +P + +PR F
Sbjct: 744 ----------------TEARP---PSRQLQALLARNIINAARRKSASPRSAGAENPRPFS 784
Query: 254 CDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSE 313
P P P PP P PQ R AA PG F P P+
Sbjct: 785 PPRAPPPP---------PPPPPPPPRM----RSPQPARPGSAAVPGAAFAPIPRSPLPAG 831
Query: 314 ELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAP 349
S SPR P+ PP Y +P
Sbjct: 832 PSSCTSPRS------------PLPAPPRPFLYRRSP 855
Score = 35.8 bits (81), Expect = 0.20
Identities = 41/154 (26%), Positives = 50/154 (32%), Gaps = 33/154 (21%)
Query: 65 ETLPEPPPPE-------SAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRG 117
ET PP + + + AR + A PR P +PP P P PP P R
Sbjct: 743 ETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRM 802
Query: 118 REAQRAARAEASPRREPAYPALRALAN-ELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEP 176
R Q PA P A+ PI P GP C P
Sbjct: 803 RSPQ------------PARPGSAAVPGAAFAPIPRSPLPAGP----------SSCTSPRS 840
Query: 177 --PAGPAPHVRCRLDIKPDDAVLQHATRGSRSCG 208
PA P P + R D L G++S G
Sbjct: 841 PLPAPPRPFL-YRRSPTDSDVSLDSEDSGAKSPG 873
Score = 32.7 bits (73), Expect = 1.7
Identities = 52/213 (24%), Positives = 74/213 (34%), Gaps = 21/213 (9%)
Query: 453 LAPGPRREDPLGRGRSYENLLGREVREPRGVSPE--GRRPPVVVNLSTSPRRYAA----L 506
L P P P G++ +P VSP G PV + + SPR A
Sbjct: 607 LPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSF 666
Query: 507 SLSETSLTEKGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAP 566
S + + R E L + TP + + L P WE G + P P
Sbjct: 667 STRNAGIEAQDRR-ESLPTSPPWTPGASRPPSSLDGWVSPGP--WEPGRGSSMSSPPPLP 723
Query: 567 DGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAA-DCLGPQLRRLLDSRPAGSG--- 622
P S + L + ++RP + Q A + + R+ R AG+
Sbjct: 724 PPPPMSPSWSERSVSPLRPET--EARPPSRQLQALLARNIINAARRKSASPRSAGAENPR 781
Query: 623 ------APALAPPRSPPASAGSAEEPAAPGEAA 649
AP PP PP + +PA PG AA
Sbjct: 782 PFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAA 814
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 46.2 bits (108), Expect = 1e-04
Identities = 63/243 (25%), Positives = 90/243 (37%), Gaps = 31/243 (12%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRAR- 81
PGPA PA+P+ K + ++ P T P P A P A+
Sbjct: 326 PGPAKP----------PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQ 375
Query: 82 TREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRA 141
T +P A PPG+ PA P A+ + +P+ P L++
Sbjct: 376 TGSEKPSSEQPGPKALAQPPGVGKTPAQQP------GPAKPPTQQVGTPKPLAQQPGLQS 429
Query: 142 LANELHPIKLQPQRGGPGRVAPLCAAAGRCA-----PPEPPA---GPA-PHVRCRLDIKP 192
A P K Q+ GPG++ A G+ + P +PP+ GPA P + KP
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKP 489
Query: 193 DDAVLQHATRGSRSCG----PTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCAD 248
A S+ G P + A+P+PQ G T P P S P+ A
Sbjct: 490 PPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKP-PSQQPGSAKPSAQQPSPAK 548
Query: 249 PRA 251
P A
Sbjct: 549 PSA 551
Score = 42.7 bits (99), Expect = 0.002
Identities = 73/344 (21%), Positives = 119/344 (34%), Gaps = 53/344 (15%)
Query: 72 PPESAVPRARTREAEPRRRARSKSA---PRAPPGLTPAPASPPVLPRRGREAQRAARAEA 128
P + R +T++A+ R K + P PP P P PP + G E +++
Sbjct: 273 PLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPA-QQPGHE-----KSQP 326
Query: 129 SPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPP------EPPAGPAP 182
P + PA P+ P ++P PG P G PP E P+ P
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQP 386
Query: 183 HVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPS 242
+ +P A + + PT+ +P Q GL P ++ P P+
Sbjct: 387 GPKAL--AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP-------AKAPGPT 437
Query: 243 DSYCADPRAFYCDGPLPGPRDYAERRSLPFTTP---PGPTQFFYTEEPQGFRGSFAASPG 299
+ P GP + +++ P P PGP + PQ PG
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAK----PPPQ--------QPG 485
Query: 300 PTFDAYYPRPYPSEELSGPSPRRMGG------YYAGEVRTFPIQEPPSRSYYGEAPRAYG 353
P +P P + S P + G G + P Q+P S + P +
Sbjct: 486 PA------KPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSP-QQPGSTKPPSQQPGS-A 537
Query: 354 LPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRS 397
P + P +P A + +P G+ + ++ + P S
Sbjct: 538 KPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPS 581
Score = 42.0 bits (97), Expect = 0.003
Identities = 77/319 (24%), Positives = 109/319 (34%), Gaps = 59/319 (18%)
Query: 66 TLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPP----GLT------PAPASPPVLPR 115
+LP P P P A+ +S+ P PP GLT P PPV P
Sbjct: 297 SLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPP 356
Query: 116 RGRE--------AQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGP--------G 159
+ A+ A+ S + P +ALA K Q+ GP G
Sbjct: 357 GTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 160 RVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSC---GPTEAAHWA 216
PL G +P + P V+ P Q A G S GPT
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQ---QPGPGKIPAQQAGPGKTSAQQTGPT------ 467
Query: 217 RPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPP 276
+P Q G P P+ ++ P P A P + P P+ P P
Sbjct: 468 KPPSQLPGPAKPPPQQPGPAK-PPPQQPGSAKPPSQQPGSTKPPPQQ-------PGPAKP 519
Query: 277 GPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPI 336
P Q T+ P GS S +P P++ + S + + +G+ P+
Sbjct: 520 SPQQPGSTKPPSQQPGSAKPSA--------QQPSPAKPSAQQSTKPVSQTGSGK----PL 567
Query: 337 QEPPSRSYYGEAPRAYGLP 355
Q PP+ S + P + GLP
Sbjct: 568 Q-PPTVSPSAKQPPSQGLP 585
Score = 33.1 bits (74), Expect = 1.3
Identities = 79/376 (21%), Positives = 119/376 (31%), Gaps = 97/376 (25%)
Query: 60 DGPAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGRE 119
D + L + P P+ P + A++K P A PAP P +P E
Sbjct: 687 DAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVP---SE 743
Query: 120 AQRAARAEASPRR------------------EPAYPA--LRALANELHPIKLQPQRGGPG 159
+A A+ P++ +P P+ +++ A E L+ P
Sbjct: 744 QDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPS 803
Query: 160 RVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCG----------- 208
+ P + +P + A P P D ++ H S S G
Sbjct: 804 QSFP--PTGEKVSPFDSKAIPRP--------ASDSKIISHPGPSSESKGQKQVDPVQKKE 853
Query: 209 -PTEAAHWARPAPQFHGL-----TVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPR 262
P +A P P + T PGPR A PTP S P P+
Sbjct: 854 EPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQS--------------PKPQ 899
Query: 263 DYAERRSL--------PFTTPPGPTQFFYTEEPQGFRGSF----------AASPGPTFDA 304
+ + R SL P + P P Q T + GF S A PGP +
Sbjct: 900 EQSRRFSLNLGSITDAPKSQPTTP-QETVTGKLFGFGASIFSQASNLISTAGQPGPHSQS 958
Query: 305 -------YYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYG 357
P P GP P+ G ++ P+++ +AP A L
Sbjct: 959 GPGAPMKQAPAPSQPPTSQGP-PKSTGQAPPAPAKSIPVKKET------KAPAAEKLEPK 1011
Query: 358 PRYVPEEPRAHSTARP 373
P R + +P
Sbjct: 1012 AEQAPTVKRTETEKKP 1027
Score = 31.2 bits (69), Expect = 5.0
Identities = 47/218 (21%), Positives = 78/218 (35%), Gaps = 13/218 (5%)
Query: 456 GPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTE 515
GP R DPL + + +++ ++ + + P G P+ T +A L L +
Sbjct: 224 GPGR-DPLQQDGTPKSISSQQPEKIKS-QPPGTGKPIQGPTQTPQTDHAKLPLQRDASRP 281
Query: 516 KGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPDGPTSGRQR 575
+ + + + R V P + P + PG P A P SG +
Sbjct: 282 QTKQAD-IVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTK 340
Query: 576 SLEQLDELITDLVIDSRPTAGQASEPAADCLGPQ---LRRLLDSRPAGS--GAPALAPPR 630
L Q + V T +P A LGP ++ +P+ G ALA P
Sbjct: 341 PLAQQPGTVKPPVQPPGTT-----KPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP 395
Query: 631 SPPASAGSAEEPAAPGEAADASPEPSADEDDLMTCSNA 668
+ PA P +P+P A + L + + A
Sbjct: 396 GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKA 433
Score = 30.4 bits (67), Expect = 8.4
Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 35/158 (22%)
Query: 25 PASKCSPCERSVAR-PAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRARTR 83
PAS+ SV+ PA+P PF + +LD A P PPPP P
Sbjct: 2372 PASQLPSGSPSVSSLPAKPRPFFRS--------SSLDISAQPPPPPPPPPPPPPP----- 2418
Query: 84 EAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALA 143
PP P P PP P+ ++ ASP A P A+
Sbjct: 2419 ----------------PPPPPPPPLPPPTSPKPTILPKKKLTV-ASP-VTTATPLFDAVT 2460
Query: 144 NELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPA 181
L + G P V +C A PP+P + P+
Sbjct: 2461 T-LETTAVLRSNGLP--VTRICTTAPPPVPPKPSSIPS 2495
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 46.2 bits (108), Expect = 1e-04
Identities = 63/243 (25%), Positives = 90/243 (37%), Gaps = 31/243 (12%)
Query: 23 PGPASKCSPCERSVARPAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRAR- 81
PGPA PA+P+ K + ++ P T P P A P A+
Sbjct: 326 PGPAKP----------PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQ 375
Query: 82 TREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRA 141
T +P A PPG+ PA P A+ + +P+ P L++
Sbjct: 376 TGSEKPSSEQPGPKALAQPPGVGKTPAQQP------GPAKPPTQQVGTPKPLAQQPGLQS 429
Query: 142 LANELHPIKLQPQRGGPGRVAPLCAAAGRCA-----PPEPPA---GPA-PHVRCRLDIKP 192
A P K Q+ GPG++ A G+ + P +PP+ GPA P + KP
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKP 489
Query: 193 DDAVLQHATRGSRSCG----PTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSYCAD 248
A S+ G P + A+P+PQ G T P P S P+ A
Sbjct: 490 PPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKP-PSQQPGSAKPSAQQPSPAK 548
Query: 249 PRA 251
P A
Sbjct: 549 PSA 551
Score = 42.7 bits (99), Expect = 0.002
Identities = 73/344 (21%), Positives = 119/344 (34%), Gaps = 53/344 (15%)
Query: 72 PPESAVPRARTREAEPRRRARSKSA---PRAPPGLTPAPASPPVLPRRGREAQRAARAEA 128
P + R +T++A+ R K + P PP P P PP + G E +++
Sbjct: 273 PLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPA-QQPGHE-----KSQP 326
Query: 129 SPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGRCAPP------EPPAGPAP 182
P + PA P+ P ++P PG P G PP E P+ P
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQP 386
Query: 183 HVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPS 242
+ +P A + + PT+ +P Q GL P ++ P P+
Sbjct: 387 GPKAL--AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP-------AKAPGPT 437
Query: 243 DSYCADPRAFYCDGPLPGPRDYAERRSLPFTTP---PGPTQFFYTEEPQGFRGSFAASPG 299
+ P GP + +++ P P PGP + PQ PG
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAK----PPPQ--------QPG 485
Query: 300 PTFDAYYPRPYPSEELSGPSPRRMGG------YYAGEVRTFPIQEPPSRSYYGEAPRAYG 353
P +P P + S P + G G + P Q+P S + P +
Sbjct: 486 PA------KPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSP-QQPGSTKPPSQQPGS-A 537
Query: 354 LPYGPRYVPEEPRAHSTARPFYTEDFGRYRERDVLARTYPHPRS 397
P + P +P A + +P G+ + ++ + P S
Sbjct: 538 KPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPS 581
Score = 42.0 bits (97), Expect = 0.003
Identities = 77/319 (24%), Positives = 109/319 (34%), Gaps = 59/319 (18%)
Query: 66 TLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPP----GLT------PAPASPPVLPR 115
+LP P P P A+ +S+ P PP GLT P PPV P
Sbjct: 297 SLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPP 356
Query: 116 RGRE--------AQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGP--------G 159
+ A+ A+ S + P +ALA K Q+ GP G
Sbjct: 357 GTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 160 RVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSC---GPTEAAHWA 216
PL G +P + P V+ P Q A G S GPT
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQ---QPGPGKIPAQQAGPGKTSAQQTGPT------ 467
Query: 217 RPAPQFHGLTVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPP 276
+P Q G P P+ ++ P P A P + P P+ P P
Sbjct: 468 KPPSQLPGPAKPPPQQPGPAK-PPPQQPGSAKPPSQQPGSTKPPPQQ-------PGPAKP 519
Query: 277 GPTQFFYTEEPQGFRGSFAASPGPTFDAYYPRPYPSEELSGPSPRRMGGYYAGEVRTFPI 336
P Q T+ P GS S +P P++ + S + + +G+ P+
Sbjct: 520 SPQQPGSTKPPSQQPGSAKPSA--------QQPSPAKPSAQQSTKPVSQTGSGK----PL 567
Query: 337 QEPPSRSYYGEAPRAYGLP 355
Q PP+ S + P + GLP
Sbjct: 568 Q-PPTVSPSAKQPPSQGLP 585
Score = 33.1 bits (74), Expect = 1.3
Identities = 79/376 (21%), Positives = 119/376 (31%), Gaps = 97/376 (25%)
Query: 60 DGPAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGRE 119
D + L + P P+ P + A++K P A PAP P +P E
Sbjct: 687 DAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVP---SE 743
Query: 120 AQRAARAEASPRR------------------EPAYPA--LRALANELHPIKLQPQRGGPG 159
+A A+ P++ +P P+ +++ A E L+ P
Sbjct: 744 QDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPS 803
Query: 160 RVAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCG----------- 208
+ P + +P + A P P D ++ H S S G
Sbjct: 804 QSFP--PTGEKVSPFDSKAIPRP--------ASDSKIISHPGPSSESKGQKQVDPVQKKE 853
Query: 209 -PTEAAHWARPAPQFHGL-----TVPGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPR 262
P +A P P + T PGPR A PTP S P P+
Sbjct: 854 EPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQS--------------PKPQ 899
Query: 263 DYAERRSL--------PFTTPPGPTQFFYTEEPQGFRGSF----------AASPGPTFDA 304
+ + R SL P + P P Q T + GF S A PGP +
Sbjct: 900 EQSRRFSLNLGSITDAPKSQPTTP-QETVTGKLFGFGASIFSQASNLISTAGQPGPHSQS 958
Query: 305 -------YYPRPYPSEELSGPSPRRMGGYYAGEVRTFPIQEPPSRSYYGEAPRAYGLPYG 357
P P GP P+ G ++ P+++ +AP A L
Sbjct: 959 GPGAPMKQAPAPSQPPTSQGP-PKSTGQAPPAPAKSIPVKKET------KAPAAEKLEPK 1011
Query: 358 PRYVPEEPRAHSTARP 373
P R + +P
Sbjct: 1012 AEQAPTVKRTETEKKP 1027
Score = 31.2 bits (69), Expect = 5.0
Identities = 47/218 (21%), Positives = 78/218 (35%), Gaps = 13/218 (5%)
Query: 456 GPRREDPLGRGRSYENLLGREVREPRGVSPEGRRPPVVVNLSTSPRRYAALSLSETSLTE 515
GP R DPL + + +++ ++ + + P G P+ T +A L L +
Sbjct: 224 GPGR-DPLQQDGTPKSISSQQPEKIKS-QPPGTGKPIQGPTQTPQTDHAKLPLQRDASRP 281
Query: 516 KGRAGEGLGRNWYVTPEITITDNDLRATERPSARAWELPGGRTRPPPHAAPDGPTSGRQR 575
+ + + + R V P + P + PG P A P SG +
Sbjct: 282 QTKQAD-IVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTK 340
Query: 576 SLEQLDELITDLVIDSRPTAGQASEPAADCLGPQ---LRRLLDSRPAGS--GAPALAPPR 630
L Q + V T +P A LGP ++ +P+ G ALA P
Sbjct: 341 PLAQQPGTVKPPVQPPGTT-----KPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP 395
Query: 631 SPPASAGSAEEPAAPGEAADASPEPSADEDDLMTCSNA 668
+ PA P +P+P A + L + + A
Sbjct: 396 GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKA 433
Score = 30.4 bits (67), Expect = 8.4
Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 35/158 (22%)
Query: 25 PASKCSPCERSVAR-PAEPAPFNKRHCRSFDFLEALDGPAMETLPEPPPPESAVPRARTR 83
PAS+ SV+ PA+P PF + +LD A P PPPP P
Sbjct: 2372 PASQLPSGSPSVSSLPAKPRPFFRS--------SSLDISAQPPPPPPPPPPPPPP----- 2418
Query: 84 EAEPRRRARSKSAPRAPPGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALA 143
PP P P PP P+ ++ ASP A P A+
Sbjct: 2419 ----------------PPPPPPPPLPPPTSPKPTILPKKKLTV-ASP-VTTATPLFDAVT 2460
Query: 144 NELHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPAGPA 181
L + G P V +C A PP+P + P+
Sbjct: 2461 T-LETTAVLRSNGLP--VTRICTTAPPPVPPKPSSIPS 2495
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 45.8 bits (107), Expect = 2e-04
Identities = 68/250 (27%), Positives = 87/250 (34%), Gaps = 22/250 (8%)
Query: 79 RARTREAEPRRRARSKSAPRAPPGLT-PAPASPPVLPRRGREAQRAARAEASPRREPAYP 137
+ R + A P R+ R + P+ PPG + P+ R A+ A S R P P
Sbjct: 123 QGRVQGAAPGRKLRGE--PKTPPGRSGPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPP 180
Query: 138 ALRALANE---LHPIKLQPQRGGPGRVAPLCAAAGRCAPPEPPA-------GPAPHVRCR 187
A A L P + R P C R PP P P P VR R
Sbjct: 181 ARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPR 240
Query: 188 LDIKPDDAVLQHAT--RGSRSCGPTEAAHWARPAPQFHGLTVPGPRHMALSRTPTPSDSY 245
L + L+ A RGSR+ A R A LT+ A S+
Sbjct: 241 LRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQ 300
Query: 246 CADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEPQGFRGSFAASPGPTFDAY 305
A RAF PLP P + SLP G +P+ R + A P
Sbjct: 301 AAPTRAFCSADPLPRPPSFVP--SLPSPQAQGQA----VRQPRLLRAALARG-APRGRTP 353
Query: 306 YPRPYPSEEL 315
PRP P+ L
Sbjct: 354 SPRPGPAPAL 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,411,248
Number of Sequences: 37866
Number of extensions: 3695007
Number of successful extensions: 32363
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 1233
Number of HSP's that attempted gapping in prelim test: 22296
Number of HSP's gapped (non-prelim): 10168
length of query: 976
length of database: 18,247,518
effective HSP length: 112
effective length of query: 864
effective length of database: 14,006,526
effective search space: 12101638464
effective search space used: 12101638464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.