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Search of human proteins with 148727370
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148727370 immediate early response 5-like [Homo sapiens]
(404 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148727370 immediate early response 5-like [Homo sapiens] 847 0.0
gi|142976757 immediate early response 5 [Homo sapiens] 91 1e-18
gi|154146199 sal-like 3 [Homo sapiens] 69 6e-12
gi|55750053 atrophin-1 [Homo sapiens] 65 8e-11
gi|55750041 atrophin-1 [Homo sapiens] 65 8e-11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 59 6e-09
gi|12751477 forkhead box L2 [Homo sapiens] 59 8e-09
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 59 1e-08
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 58 1e-08
gi|110832843 TBP-associated factor 4 [Homo sapiens] 57 2e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 57 2e-08
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 57 3e-08
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 57 3e-08
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 57 3e-08
gi|39812378 RAN binding protein 9 [Homo sapiens] 57 3e-08
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 57 3e-08
gi|160707881 formin 2 [Homo sapiens] 57 4e-08
gi|19111150 angiomotin isoform 2 [Homo sapiens] 56 5e-08
gi|166064029 angiomotin isoform 1 [Homo sapiens] 56 5e-08
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 56 5e-08
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 55 9e-08
gi|134142824 forkhead box D2 [Homo sapiens] 55 1e-07
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 55 1e-07
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|48675811 immediate early response 2 [Homo sapiens] 55 1e-07
gi|146134388 YLP motif containing 1 [Homo sapiens] 54 2e-07
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 54 3e-07
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 53 4e-07
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 53 4e-07
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 53 4e-07
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 847 bits (2188), Expect = 0.0
Identities = 404/404 (100%), Positives = 404/404 (100%)
Query: 1 MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQ 60
MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQ
Sbjct: 1 MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQ 60
Query: 61 QQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQL 120
QQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQL
Sbjct: 61 QQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQL 120
Query: 121 HLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQP 180
HLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQP
Sbjct: 121 HLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQP 180
Query: 181 GPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAY 240
GPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAY
Sbjct: 181 GPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAY 240
Query: 241 PTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCGQGAPGPGLASAAGC 300
PTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCGQGAPGPGLASAAGC
Sbjct: 241 PTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCGQGAPGPGLASAAGC 300
Query: 301 KRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAPCKRARFEDFCPDSSPDASNISNLISIF 360
KRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAPCKRARFEDFCPDSSPDASNISNLISIF
Sbjct: 301 KRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAPCKRARFEDFCPDSSPDASNISNLISIF 360
Query: 361 GSGFSGLVSRQPDSSEQPPPLNGQLCAKQALASLGAWTRAIVAF 404
GSGFSGLVSRQPDSSEQPPPLNGQLCAKQALASLGAWTRAIVAF
Sbjct: 361 GSGFSGLVSRQPDSSEQPPPLNGQLCAKQALASLGAWTRAIVAF 404
>gi|142976757 immediate early response 5 [Homo sapiens]
Length = 327
Score = 91.3 bits (225), Expect = 1e-18
Identities = 90/275 (32%), Positives = 111/275 (40%), Gaps = 79/275 (28%)
Query: 1 MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQ 60
ME L+A ++SISL KI++SR QRGGIKLHKNLLVS VLR+ARQ+YLS+ LY
Sbjct: 1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGP 60
Query: 61 QQQQQQPPHHQHQHLA------YAAPGMPASAADF------------------------- 89
PP Q A + P PA+ A +
Sbjct: 61 AGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA 120
Query: 90 ---GPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAP 146
G + GG+A+A E A + PR AA A G
Sbjct: 121 TVTGVGDVFQGGEADATEAA---------------------WSRVEGPRQAAAREAEGT- 158
Query: 147 AGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGP--------APLPLPLPPPAPAALC 198
AGG G E+ A + P G P G+ P P AP P PPAP A+C
Sbjct: 159 AGGWGVFPEV--SRAARRPCGCPLGGED-PPGTPAATPRAACCCAPQPAEDEPPAPPAVC 215
Query: 199 PRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
PR C+A G P PAP S+P
Sbjct: 216 PR-----KRCAAGVGGGPAGC-------PAPGSTP 238
Score = 56.2 bits (134), Expect = 5e-08
Identities = 78/277 (28%), Positives = 100/277 (36%), Gaps = 61/277 (22%)
Query: 181 GPAPLPLPLPPPAPAALCPRDPRA--PAACSAPPGAAPPAAAAS-PPASPAP----ASSP 233
GPA P P P P +P A PA PP PPAA AS P P P S
Sbjct: 59 GPAGTPAPPPQQQPG-----EPAAGPPAGWGEPP---PPAARASWPETEPQPERSSVSDA 110
Query: 234 GFYRGAYPTPSDFGLHCSSQTTVLDLDTHVVTTVEN----------------GYLHQDCC 277
P + G+ Q D + VE G +
Sbjct: 111 PRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSR 170
Query: 278 ASAH---CPCCGQGAPG-PGLASAAGCKRKYYPGQEEEEDD------EEDAGGLGAEP-- 325
A+ CP G+ PG P A C P ++E + A G+G P
Sbjct: 171 AARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAG 230
Query: 326 ---PGGAPFAPCKRARFEDFCPDSSPDAS-----NISNLISIFGSGFSGLVSRQP----- 372
PG P +R + DA N++NLISIFGS FSGL+ + P
Sbjct: 231 CPAPGSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGRE 290
Query: 373 -DSSEQPPP---LNGQLCA-KQALASLGAWTRAIVAF 404
+ E+ P GQ+C K L + W+ AIVAF
Sbjct: 291 EEEGEESGPEAAEPGQICCDKPVLRDMNPWSTAIVAF 327
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 69.3 bits (168), Expect = 6e-12
Identities = 61/165 (36%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 96 GGGDAEAREPAARHQLHQLHQ--LHQLHLQQQLHQH----QHPAPRGCAAAAAAGAPAGG 149
GGG A A P QL L Q +HQL L +Q+ Q P PR + AAA P+
Sbjct: 194 GGGVAAAAVPLILEQLMALQQQQIHQLQLIEQIRSQVALMQRPPPRPSLSPAAA--PSAP 251
Query: 150 AGALSELPGCAALQPPHGAPHRG-QPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAAC 208
A S+LPG AAL GAP P P PL P A P P P+A
Sbjct: 252 GPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAP 311
Query: 209 SAPPGAAPPAAAASPP------------ASPAPASSPGFYRGAYP 241
+AP A PAA A P AS PA +PG GA P
Sbjct: 312 AAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAPGSLLGAAP 356
Score = 31.6 bits (70), Expect = 1.3
Identities = 43/167 (25%), Positives = 53/167 (31%), Gaps = 24/167 (14%)
Query: 48 LSERYAELYRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAA 107
+S R + + ++ PP +H AAPG A AD GP GG + E
Sbjct: 1 MSRRKQAKPQHLKSDEELLPPDGAPEH---AAPGEGAEDADSGPESRSGGEETSVCEKCC 57
Query: 108 RHQLHQL----HQLHQLHLQQQLHQHQH---PAPRGCAAAAAAGAP-----------AGG 149
HQ L L H+ P P + A +P AG
Sbjct: 58 AEFFKWADFLEHQRSCTKLPPVLIVHEDAPAPPPEDFPEPSPASSPSERAESEAAEEAGA 117
Query: 150 AGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAA 196
GA E P A G P P AP P P PA A
Sbjct: 118 EGAEGEARPVEKEAEPMDAEPAGDTRAPRPPPAAPAP---PTPAYGA 161
Score = 30.8 bits (68), Expect = 2.3
Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 138 AAAAAAGAPAGGAGALSELPGCAALQP-----PHGAPHRGQPLEPLQPGPAPLPLPLPPP 192
+A A+ +P + A SE CA+L P G + + L GP PL
Sbjct: 545 SATPASRSPQRPSPASSE---CASLSPGLNHVESGVSATAESPQSLLGGP-----PLTKA 596
Query: 193 APAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPSDF---GLH 249
P +L + RA AP GA AA S +P SPG + + F GL
Sbjct: 597 EPVSLPCTNARAG---DAPVGAQASAAPTSVDGAPTSLGSPGLPAVSEQFKAQFPFGGLL 653
Query: 250 CSSQTTVLDLDTHVVTTVENGYLHQDCCASAH 281
S QT+ +V ++ + C H
Sbjct: 654 DSMQTSETSKLQQLVENIDKKMTDPNQCVICH 685
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 65.5 bits (158), Expect = 8e-11
Identities = 69/247 (27%), Positives = 91/247 (36%), Gaps = 23/247 (9%)
Query: 85 SAADFGPLQLGGGGDAEAREPAARHQLH--QLHQLHQLHLQQQLHQHQHPAPRGCAAAAA 142
S A GP G + A P + H H Q Q Q QQQ Q QH G A
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA 514
Query: 143 AGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDP 202
P G + P A+ P G+ L P PGPA LP PP + + P
Sbjct: 515 FPHPLEGGSSHHAHP--YAMSPSLGS------LRPYPPGPAHLP---PPHSQVSYSQAGP 563
Query: 203 RAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGA-YPTPSDFGLHCSSQTTVLDLDT 261
P S+ ++ + + P + P+P+ P +GA YP P + SS T +
Sbjct: 564 NGPPVSSSSNSSSSTSQGSYPCSHPSPSQGP---QGAPYPFPPVPTVTTSSATL-----S 615
Query: 262 HVVTTVENGYLHQDCCASAHCPCCGQGAPGPGLASAAGCKRKYYPGQEEEEDDEEDAGGL 321
V+ TV + + P G+ AP PG A Y PG G
Sbjct: 616 TVIATVASSPAGYKTASPPGPPPYGKRAPSPG-AYKTATPPGYKPGSPPSFRTGTPPGYR 674
Query: 322 GAEPPGG 328
G PP G
Sbjct: 675 GTSPPAG 681
Score = 47.0 bits (110), Expect = 3e-05
Identities = 49/191 (25%), Positives = 75/191 (39%), Gaps = 13/191 (6%)
Query: 56 YRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQL- 114
+++QQQQQQQQ Q Q + G P A PL+ GG A A L L
Sbjct: 483 HQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLE--GGSSHHAHPYAMSPSLGSLR 540
Query: 115 -HQLHQLHLQQQLHQ--HQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHR 171
+ HL Q + P G ++++ + + + + Q P GAP+
Sbjct: 541 PYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYP 600
Query: 172 GQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPAS 231
P+ + A L + A A P A ++PPG P A P + A+
Sbjct: 601 FPPVPTVTTSSATLSTVI---ATVASSP----AGYKTASPPGPPPYGKRAPSPGAYKTAT 653
Query: 232 SPGFYRGAYPT 242
PG+ G+ P+
Sbjct: 654 PPGYKPGSPPS 664
Score = 42.4 bits (98), Expect = 8e-04
Identities = 55/195 (28%), Positives = 78/195 (40%), Gaps = 34/195 (17%)
Query: 63 QQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHL 122
+Q PP + A G P + P+ GGG+ + P A H+
Sbjct: 251 KQHPPPTTPISVSSSGASGAPPTKPPTTPV---GGGNLPSAPPPANFP----------HV 297
Query: 123 QQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGP 182
L P P A A G GA LPG L PH GQ + L PGP
Sbjct: 298 TPNL-----PPPPALRPLNNASASPPGLGA-QPLPG--HLPSPHAM---GQGMGGLPPGP 346
Query: 183 ------APLPLPLPPPAPAALCP--RDPRAPAACSAPPGAAPPAAAASPPASPAPASSP- 233
AP P LPP + +A P R P + ++ S+ A+ ++++S ASP PAS
Sbjct: 347 EKGPTLAPSPHSLPPASSSAPAPPMRFPYS-SSSSSSAAASSSSSSSSSSASPFPASQAL 405
Query: 234 GFYRGAYPTPSDFGL 248
Y ++P P+ +
Sbjct: 406 PSYPHSFPPPTSLSV 420
Score = 39.3 bits (90), Expect = 0.006
Identities = 42/141 (29%), Positives = 52/141 (36%), Gaps = 25/141 (17%)
Query: 130 QHPAPR---GCAAAAAAGAPAG-------GAGALSELPGCAALQPPHGAPHRGQPLEP-L 178
QHP P +++ A+GAP G G L P PP PH + P L
Sbjct: 252 QHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAP------PPANFPH----VTPNL 301
Query: 179 QPGPAPLPL----PLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPG 234
P PA PL PP A P +P A G PP P +P+P S P
Sbjct: 302 PPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPP 361
Query: 235 FYRGAYPTPSDFGLHCSSQTT 255
A P F SS ++
Sbjct: 362 ASSSAPAPPMRFPYSSSSSSS 382
Score = 38.9 bits (89), Expect = 0.008
Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 23/124 (18%)
Query: 133 APRGCAAAAAAG-------APAGGAGALSELPGCAALQPPH---GAP--HRGQ--PLEP- 177
+P G A+ G AP+ GA + PG PP G P +RG P P
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPG 683
Query: 178 -LQPG-PAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAA-----PPAAAASPPASPA-P 229
+PG P P PLPP P+ L P A S PP +A PA P SP P
Sbjct: 684 TFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPP 743
Query: 230 ASSP 233
A SP
Sbjct: 744 ARSP 747
Score = 35.0 bits (79), Expect = 0.12
Identities = 35/109 (32%), Positives = 40/109 (36%), Gaps = 18/109 (16%)
Query: 132 PAPRGCAAAAAAGAPAGGAGAL--SELPGCAALQPPHGAPHRGQPLEPLQPGPAPLP--- 186
P+P A G G + PG PP G P +P P GP PLP
Sbjct: 644 PSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAG-PGTFKPGSPTV-GPGPLPPAG 701
Query: 187 ---LPLPPPAPAALCPRDP-------RAPA-ACSAPPGAAPPAAAASPP 224
LP PP PAA P + PA P PPA + SPP
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPP 750
Score = 31.6 bits (70), Expect = 1.3
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 138 AAAAAAGAPAGGAGALSELPGCAALQ-------PPHGAPHRGQPLEPLQPG-PAPLPLPL 189
++AAA+ + + + + S P AL PP QP + QP P+
Sbjct: 381 SSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQ 440
Query: 190 PPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASP 227
PP P P R A +A PG PP+ A A P
Sbjct: 441 GPPPP----PPYGRLLANSNAHPGPFPPSTGAQSTAHP 474
Score = 30.8 bits (68), Expect = 2.3
Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 9/71 (12%)
Query: 163 QPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAAS 222
QPP P QP +P P+ P P +P APPGA PP
Sbjct: 170 QPPDSTPR--QPEASFEPHPSVTPTGYH-------APMEPPTSRMFQAPPGAPPPHPQLY 220
Query: 223 PPASPAPASSP 233
P + S P
Sbjct: 221 PGGTGGVLSGP 231
Score = 30.0 bits (66), Expect = 3.9
Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 144 GAPAGGAGALSEL--PGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP--PAPAALCP 199
G+P G G L G +L PP AP G PL Q P P P P A P
Sbjct: 688 GSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSP 747
Query: 200 RDPRAPAACSAPPGAAPPA 218
P P P A+ A
Sbjct: 748 SPP--PKVVDVPSHASQSA 764
Score = 28.9 bits (63), Expect = 8.7
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
Query: 178 LQPGPA----PLPLPLPPPAPAALCPRDPRA---PAACSAPPGAAPPAAAASPPASPAPA 230
L GPA P PL P P P PR P A P P G P + AP
Sbjct: 151 LSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
Query: 231 SSPGFYRGAYP 241
+P + YP
Sbjct: 211 GAPPPHPQLYP 221
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 65.5 bits (158), Expect = 8e-11
Identities = 69/247 (27%), Positives = 91/247 (36%), Gaps = 23/247 (9%)
Query: 85 SAADFGPLQLGGGGDAEAREPAARHQLH--QLHQLHQLHLQQQLHQHQHPAPRGCAAAAA 142
S A GP G + A P + H H Q Q Q QQQ Q QH G A
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA 514
Query: 143 AGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDP 202
P G + P A+ P G+ L P PGPA LP PP + + P
Sbjct: 515 FPHPLEGGSSHHAHP--YAMSPSLGS------LRPYPPGPAHLP---PPHSQVSYSQAGP 563
Query: 203 RAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGA-YPTPSDFGLHCSSQTTVLDLDT 261
P S+ ++ + + P + P+P+ P +GA YP P + SS T +
Sbjct: 564 NGPPVSSSSNSSSSTSQGSYPCSHPSPSQGP---QGAPYPFPPVPTVTTSSATL-----S 615
Query: 262 HVVTTVENGYLHQDCCASAHCPCCGQGAPGPGLASAAGCKRKYYPGQEEEEDDEEDAGGL 321
V+ TV + + P G+ AP PG A Y PG G
Sbjct: 616 TVIATVASSPAGYKTASPPGPPPYGKRAPSPG-AYKTATPPGYKPGSPPSFRTGTPPGYR 674
Query: 322 GAEPPGG 328
G PP G
Sbjct: 675 GTSPPAG 681
Score = 47.0 bits (110), Expect = 3e-05
Identities = 49/191 (25%), Positives = 75/191 (39%), Gaps = 13/191 (6%)
Query: 56 YRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQL- 114
+++QQQQQQQQ Q Q + G P A PL+ GG A A L L
Sbjct: 483 HQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLE--GGSSHHAHPYAMSPSLGSLR 540
Query: 115 -HQLHQLHLQQQLHQ--HQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHR 171
+ HL Q + P G ++++ + + + + Q P GAP+
Sbjct: 541 PYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYP 600
Query: 172 GQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPAS 231
P+ + A L + A A P A ++PPG P A P + A+
Sbjct: 601 FPPVPTVTTSSATLSTVI---ATVASSP----AGYKTASPPGPPPYGKRAPSPGAYKTAT 653
Query: 232 SPGFYRGAYPT 242
PG+ G+ P+
Sbjct: 654 PPGYKPGSPPS 664
Score = 42.4 bits (98), Expect = 8e-04
Identities = 55/195 (28%), Positives = 78/195 (40%), Gaps = 34/195 (17%)
Query: 63 QQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHL 122
+Q PP + A G P + P+ GGG+ + P A H+
Sbjct: 251 KQHPPPTTPISVSSSGASGAPPTKPPTTPV---GGGNLPSAPPPANFP----------HV 297
Query: 123 QQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGP 182
L P P A A G GA LPG L PH GQ + L PGP
Sbjct: 298 TPNL-----PPPPALRPLNNASASPPGLGA-QPLPG--HLPSPHAM---GQGMGGLPPGP 346
Query: 183 ------APLPLPLPPPAPAALCP--RDPRAPAACSAPPGAAPPAAAASPPASPAPASSP- 233
AP P LPP + +A P R P + ++ S+ A+ ++++S ASP PAS
Sbjct: 347 EKGPTLAPSPHSLPPASSSAPAPPMRFPYS-SSSSSSAAASSSSSSSSSSASPFPASQAL 405
Query: 234 GFYRGAYPTPSDFGL 248
Y ++P P+ +
Sbjct: 406 PSYPHSFPPPTSLSV 420
Score = 39.3 bits (90), Expect = 0.006
Identities = 42/141 (29%), Positives = 52/141 (36%), Gaps = 25/141 (17%)
Query: 130 QHPAPR---GCAAAAAAGAPAG-------GAGALSELPGCAALQPPHGAPHRGQPLEP-L 178
QHP P +++ A+GAP G G L P PP PH + P L
Sbjct: 252 QHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAP------PPANFPH----VTPNL 301
Query: 179 QPGPAPLPL----PLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPG 234
P PA PL PP A P +P A G PP P +P+P S P
Sbjct: 302 PPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPP 361
Query: 235 FYRGAYPTPSDFGLHCSSQTT 255
A P F SS ++
Sbjct: 362 ASSSAPAPPMRFPYSSSSSSS 382
Score = 38.9 bits (89), Expect = 0.008
Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 23/124 (18%)
Query: 133 APRGCAAAAAAG-------APAGGAGALSELPGCAALQPPH---GAP--HRGQ--PLEP- 177
+P G A+ G AP+ GA + PG PP G P +RG P P
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPG 683
Query: 178 -LQPG-PAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAA-----PPAAAASPPASPA-P 229
+PG P P PLPP P+ L P A S PP +A PA P SP P
Sbjct: 684 TFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPP 743
Query: 230 ASSP 233
A SP
Sbjct: 744 ARSP 747
Score = 35.0 bits (79), Expect = 0.12
Identities = 35/109 (32%), Positives = 40/109 (36%), Gaps = 18/109 (16%)
Query: 132 PAPRGCAAAAAAGAPAGGAGAL--SELPGCAALQPPHGAPHRGQPLEPLQPGPAPLP--- 186
P+P A G G + PG PP G P +P P GP PLP
Sbjct: 644 PSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAG-PGTFKPGSPTV-GPGPLPPAG 701
Query: 187 ---LPLPPPAPAALCPRDP-------RAPA-ACSAPPGAAPPAAAASPP 224
LP PP PAA P + PA P PPA + SPP
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPP 750
Score = 31.6 bits (70), Expect = 1.3
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 138 AAAAAAGAPAGGAGALSELPGCAALQ-------PPHGAPHRGQPLEPLQPG-PAPLPLPL 189
++AAA+ + + + + S P AL PP QP + QP P+
Sbjct: 381 SSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQ 440
Query: 190 PPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASP 227
PP P P R A +A PG PP+ A A P
Sbjct: 441 GPPPP----PPYGRLLANSNAHPGPFPPSTGAQSTAHP 474
Score = 30.8 bits (68), Expect = 2.3
Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 9/71 (12%)
Query: 163 QPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAAS 222
QPP P QP +P P+ P P +P APPGA PP
Sbjct: 170 QPPDSTPR--QPEASFEPHPSVTPTGYH-------APMEPPTSRMFQAPPGAPPPHPQLY 220
Query: 223 PPASPAPASSP 233
P + S P
Sbjct: 221 PGGTGGVLSGP 231
Score = 30.0 bits (66), Expect = 3.9
Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 144 GAPAGGAGALSEL--PGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP--PAPAALCP 199
G+P G G L G +L PP AP G PL Q P P P P A P
Sbjct: 688 GSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSP 747
Query: 200 RDPRAPAACSAPPGAAPPA 218
P P P A+ A
Sbjct: 748 SPP--PKVVDVPSHASQSA 764
Score = 28.9 bits (63), Expect = 8.7
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
Query: 178 LQPGPA----PLPLPLPPPAPAALCPRDPRA---PAACSAPPGAAPPAAAASPPASPAPA 230
L GPA P PL P P P PR P A P P G P + AP
Sbjct: 151 LSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
Query: 231 SSPGFYRGAYP 241
+P + YP
Sbjct: 211 GAPPPHPQLYP 221
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 59.3 bits (142), Expect = 6e-09
Identities = 58/224 (25%), Positives = 75/224 (33%), Gaps = 27/224 (12%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQP------PHGAPH----RGQPLEPLQPG 181
P+P+G AA P+ G + P A P P G P +G P P
Sbjct: 934 PSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATP 993
Query: 182 PAP-----LPLPLPPPAPAALCPRDPRA-------PAACSAPPGAAPPAAAASPPASPAP 229
P+P P P P P A+ P P+ P S PP A PP+ SP A+P P
Sbjct: 994 PSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP 1053
Query: 230 ASSPGFYRGAYPTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCGQGA 289
+P P+P G S + + G + P +
Sbjct: 1054 KGAPTTPAATLPSPKG-GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPS 1112
Query: 290 PGPGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAP 333
P GLA+ P GGL PP GAP P
Sbjct: 1113 PKGGLATPPHKGAPTTPA----ATPPSPKGGLATPPPKGAPTTP 1152
Score = 53.5 bits (127), Expect = 3e-07
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Query: 132 PAPRGCAAAAAA-GAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP 190
PAP+G A+ + GAP A G A P AP P G P P
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 191 PPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPS 244
P P A P P+ A +P GA P A P +PA++P F +GA P+
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP-FPKGASTPPA 1037
Score = 53.5 bits (127), Expect = 3e-07
Identities = 39/113 (34%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 132 PAPRG-CAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP 190
P+P+G A + GAP A G A PP GAP P G P
Sbjct: 1226 PSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKG 1285
Query: 191 PPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTP 243
P PA + P P+ A S P GA P AA P +P + P +GA PTP
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP--KGA-PTP 1335
Score = 52.8 bits (125), Expect = 6e-07
Identities = 60/222 (27%), Positives = 72/222 (32%), Gaps = 39/222 (17%)
Query: 132 PAPRG-CAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP 190
P+P+G A GAP A G A PP GAP P G P P
Sbjct: 1134 PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKG 1193
Query: 191 PPAPAALCPRDPRAPAACSAPPGAAPPAAAASPP-------------ASPAPASSPGFYR 237
P A P P+ A +P G AP AA+PP A PA++P +
Sbjct: 1194 APTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1252
Query: 238 GAYPTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCG------QGAPG 291
G TP G T L + T G + P G +GAP
Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLATPPHKG-APNPAVVTPPSPKGGPATSPPKGAPT 1311
Query: 292 PGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAP 333
P A+ K G G PP GAP P
Sbjct: 1312 PPAATPPSPK-----------------GSPGTPPPKGAPTPP 1336
Score = 51.2 bits (121), Expect = 2e-06
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP 191
PAP+ A + + A A G A P GAP P G P P
Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWA 962
Query: 192 PAPAALCPRDPRAPAACSAPPGAAPPAAAASP-----PASPAPASSP 233
P P A P P+ A +P GA P AA P PA+P+P +P
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAP 1009
Score = 51.2 bits (121), Expect = 2e-06
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 15/130 (11%)
Query: 132 PAPRG-CAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP 190
P+P+G A GAP A G A PP GAP P G P P
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKG 1170
Query: 191 PPAPAALCPRDPRAPAACSAPPGAAPPAAAASPP-------------ASPAPASSPGFYR 237
P A P P+ A +P G AP AA+PP A PA++P +
Sbjct: 1171 APTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1229
Query: 238 GAYPTPSDFG 247
G TPS G
Sbjct: 1230 GGLATPSPKG 1239
Score = 50.1 bits (118), Expect = 4e-06
Identities = 60/231 (25%), Positives = 81/231 (35%), Gaps = 41/231 (17%)
Query: 132 PAPRGCAAAAAAGAPAG-GAGALSELPGCAALQP------PHGAPH-----RGQPLEPLQ 179
P+P+G A P+ G+ A + P A+ P P G+P +G P P
Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA 1062
Query: 180 PGPAPLPLPLPP-----PAPAALCPRDPRAPAACSAPPGAAPPAAA---------ASPP- 224
P+P P P P P A P P+ A +P GA P AA A+PP
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH 1122
Query: 225 --ASPAPASSPGFYRGAYPTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHC 282
A PA++P +G TP G + T + T G +
Sbjct: 1123 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKG--------APTT 1174
Query: 283 PCCGQGAPGPGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAP 333
P +P GLA+ + P GGL P GAP P
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPA----ATPPSPKGGLATPSPKGAPTTP 1221
Score = 48.1 bits (113), Expect = 1e-05
Identities = 41/120 (34%), Positives = 49/120 (40%), Gaps = 11/120 (9%)
Query: 132 PAPRGCAAAAAA-GAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP 190
P+P+G A GAP A L G A P GAP+ P P P P P
Sbjct: 1249 PSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPN---PAVVTPPSPKGGPATSP 1305
Query: 191 P---PAPAALCPRDPRAPAACSAPPGAAPPAAAA--SPPASPA-PASSPGFYRGAYPTPS 244
P P P A P P+ P GA P A SP +P PA++P +G TPS
Sbjct: 1306 PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS-SKGGPTTPS 1364
Score = 42.4 bits (98), Expect = 8e-04
Identities = 40/124 (32%), Positives = 46/124 (37%), Gaps = 18/124 (14%)
Query: 136 GCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPH---------RGQPLEPLQPGPAPLP 186
G A GAP G A PP GAP +G P P P AP P
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP-PPKGAPTP 1335
Query: 187 LPLPPPAPA------ALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRG-A 239
+ PP+P A P P S+ G PPAA S PA + P RG A
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPA-MTPPSPKRGPA 1394
Query: 240 YPTP 243
P+P
Sbjct: 1395 IPSP 1398
Score = 38.9 bits (89), Expect = 0.008
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 132 PAPRGCAA------AAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPL 185
PAP+ A A A AP G + +P P + R +P+ AP
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRR----DPI----APT 1530
Query: 186 PLPLPPPAPAALCPRDPRAPAACSAP-PGAAP--------PAAAASPPASPAPASSPGFY 236
L PA L P++ P A + P P P PA +S AS PA +P Y
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTY 1590
Query: 237 RGAYPTPSD 245
+GA P+P +
Sbjct: 1591 KGA-PSPKE 1598
Score = 38.9 bits (89), Expect = 0.008
Identities = 57/233 (24%), Positives = 79/233 (33%), Gaps = 34/233 (14%)
Query: 145 APAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRA 204
APA + + P GAP P E L P P P P P A+ P P
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAP---SPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626
Query: 205 PAACSAPPG--AAPPAAAASPPASPAPASSPGFYRGAYPTPSDFGLHCSSQTTVL----- 257
A AP G +PP +S SP +S GA + GL T L
Sbjct: 1627 GPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLV 1686
Query: 258 ---DLDTHVVTTVENGYLHQDCCASAHCPCC-----GQGAPGPGLASAAGCKRKYYPGQE 309
T ++T ++ P C G+ GP L++ A P
Sbjct: 1687 APAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGP-LSTVAPA-----PLLP 1740
Query: 310 EEEDDEEDAGGLGAE--------PPGGAPFAPCKRARFEDFCPDSSPDASNIS 354
++D + A G A PP P A FE P P+++++S
Sbjct: 1741 VQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLP--KPESASVS 1791
Score = 38.1 bits (87), Expect = 0.014
Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 132 PAPRGCAAA-AAAGAPAGGAGALSELPGCAALQPPHGAP-HRGQP-LEPLQP--GPAPLP 186
P+P+G A + GG S G PP P H+G P + P P GPA +P
Sbjct: 1341 PSPKGTPTLPATTPSSKGGPTTPSSKEGPT---PPAATPSHKGGPAMTPPSPKRGPA-IP 1396
Query: 187 LPLPPPAPAALCPRDPR-APAACSAPPGAAPPAAA-ASPPA------SPAPASSPGFYRG 238
P P A+ P P+ APA GAA P+ +PPA APA+S +G
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAP--KG 1454
Query: 239 AYPTPSDFG 247
TPS G
Sbjct: 1455 GPATPSSKG 1463
Score = 36.6 bits (83), Expect = 0.042
Identities = 43/151 (28%), Positives = 52/151 (34%), Gaps = 30/151 (19%)
Query: 134 PRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQ----PLEPLQPGPAPL-PLP 188
P G A A G A L G +L P + G PL P P+ P P
Sbjct: 655 PAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSP 714
Query: 189 LPPPAPAA---LCPRDPRAPAACSAPPGAAPPAA---------------AASPPASP--- 227
AP A L P P++ + S PP PP A+SP P
Sbjct: 715 QNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTED 774
Query: 228 ----APASSPGFYRGAYPTPSDFGLHCSSQT 254
A ASS G +PS G+ S QT
Sbjct: 775 SGASATASSKGTLTYLADSPSPLGVSVSPQT 805
Score = 36.6 bits (83), Expect = 0.042
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 165 PHGAPH---------RGQPLEPLQ-PGPAPLPLPLPPPAPAALCPRD-PRAPAACSAPPG 213
P GAP +G L P + P P+ + LP P PA P+ P S+P
Sbjct: 861 PKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKK 920
Query: 214 AAPPAAAASPPASPAP-------ASSPGFYRGAYPTPS 244
A A PASP+P A++P +G TPS
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS 958
Score = 34.7 bits (78), Expect = 0.16
Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 132 PAPRGCAAAAAAGA-PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGP-APLPLPL 189
PAP+ C +AA A P ++ P L+ P G L PL P AP LP
Sbjct: 51 PAPQQCPLSAANQASPFPSPSTIASTP----LEVPFPQSSSGTAL-PLGTAPEAPTFLPN 105
Query: 190 ---PPPAPAALCPRDPR-APAACSAPPGAAPPAAAASPPASPAPASS 232
PP +PAAL P AP P +AP A A P S +S+
Sbjct: 106 LIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSA 152
Score = 33.5 bits (75), Expect = 0.35
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 132 PAPRGCAAAAAAG---APAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLP 188
P R AA + G PA +L + P +A P G +P P P P P
Sbjct: 1419 PVTREGAATPSKGDLTPPAVTPVSLKKAPATSA--PKGGPATPSSKGDPTLPAVTP-PSP 1475
Query: 189 LPPPAPAALC-PRDPRAPAACSAPPGA--APPAAAASPPASPAPASS 232
PPAP + P+ A AP GA P +SP PA SS
Sbjct: 1476 KEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSS 1522
Score = 33.1 bits (74), Expect = 0.46
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 11/115 (9%)
Query: 133 APRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPP 192
AP A P+ G + + + P + +G P P G LP PP
Sbjct: 1415 APATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPP- 1473
Query: 193 APAALCPRDPRAP--AACSAPPGAAPPAAAASPPASPA-PASSPGFYRGAYPTPS 244
P++P AP A S+ P AP A +P +P PA P + TPS
Sbjct: 1474 -----SPKEPPAPKQVATSSSPKKAP--ATPAPMGAPTLPAVIPSSPKEVPATPS 1521
Score = 32.7 bits (73), Expect = 0.60
Identities = 32/95 (33%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 169 PHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAA--ASPPAS 226
P Q L Q A LP+ AAL P P CS P P +AA ASP S
Sbjct: 10 PATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPS 69
Query: 227 PAPASSPGFYRGAYPTPSDFGLHCSSQTTVLDLDT 261
P+ +S TP + SS T L L T
Sbjct: 70 PSTIAS---------TPLEVPFPQSSSGTALPLGT 95
Score = 32.7 bits (73), Expect = 0.60
Identities = 36/143 (25%), Positives = 55/143 (38%), Gaps = 26/143 (18%)
Query: 132 PAPRGCAAAAAAGAPA---GGAGALSELPGCAALQPPHGA---PHRGQPLEPLQPGPAPL 185
P+P G + + P G AG + + ++ P A P + + PA
Sbjct: 794 PSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATT 853
Query: 186 PLPLPP-----PAPAALCPRDPRAPAACSAPPGAAP-PAAAASP-----PASPAPASSPG 234
P PP P P+A+ P P+ + PP P P+ P PA+PAP +P
Sbjct: 854 HSPTPPSPKGAPTPSAVTPLSPK---GVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPA 910
Query: 235 FY------RGAYPTPSDFGLHCS 251
+ A TP+ G+ S
Sbjct: 911 LSMTSSSPKKARATPAPKGIPAS 933
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 58.9 bits (141), Expect = 8e-09
Identities = 66/219 (30%), Positives = 81/219 (36%), Gaps = 25/219 (11%)
Query: 56 YRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQ--LHQ 113
YRR+++ ++ P H G +A G G G P L+
Sbjct: 143 YRRRRRMKRPFRPPPAHFQPGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGFLNN 202
Query: 114 LHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQ 173
L Q Q A AAAAAA A G GA + + G A +G R Q
Sbjct: 203 SWPLPQPPSPMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQ 262
Query: 174 PLEPLQPG------------PAPLPLPLPPPAP-------AALCPRDPRAPAACSAPPGA 214
+ L PG AP P P P P P AA P P A + PPG
Sbjct: 263 SMA-LPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQ 321
Query: 215 APPA--AAASPPASPAPASSPGFYRGAYPTPSDFGLHCS 251
PA A A+PPA PAP S+PG P +HCS
Sbjct: 322 LSPASPATAAPPA-PAPTSAPGLQFACARQPELAMMHCS 359
Score = 31.6 bits (70), Expect = 1.3
Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 138 AAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP-PPAPAA 196
A AA G GAGA G L PP + LQ G PLP PP+P
Sbjct: 169 AGGAAGGCGVAGAGA----DGYGYLAPP----------KYLQSGFLNNSWPLPQPPSPM- 213
Query: 197 LCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPSDFGLHCSSQTTV 256
P A AA AAAA+ A P + +G + +G + Q+
Sbjct: 214 --------PYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMA 265
Query: 257 L 257
L
Sbjct: 266 L 266
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 58.5 bits (140), Expect = 1e-08
Identities = 60/186 (32%), Positives = 71/186 (38%), Gaps = 37/186 (19%)
Query: 67 PPHHQHQHLAYAAP-----GMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLH 121
P H H H P G P A + G GG + P RH LHQ L+
Sbjct: 1318 PHRHFHAHGPVPGPQHYTLGRPGRAP-----RRGAGGHPQFA-PHGRHPLHQPTSPLPLY 1371
Query: 122 LQQQLHQHQHPA----------PRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHR 171
H H P+ AA AAG P S PG + PH H
Sbjct: 1372 SPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPG------SRPPG-GSYSHPH---HP 1421
Query: 172 GQPLEPLQP-GPAPLPLPLPPPAP----AALCPRDPRAPAACSAPPGAAPPAAAASPPAS 226
PL P P P P PLPPP+P + L P P P S PPG A P +A+P A
Sbjct: 1422 QSPLSPHSPIPPHPSYPPLPPPSPHTPHSPLPPTSPHGPLHASGPPGTANP-PSANPKAK 1480
Query: 227 PAPASS 232
P+ S+
Sbjct: 1481 PSRIST 1486
Score = 39.3 bits (90), Expect = 0.006
Identities = 36/118 (30%), Positives = 42/118 (35%), Gaps = 22/118 (18%)
Query: 127 HQHQH---PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPL-EPLQPGP 182
H H H P P+ AP GAG P APH PL +P P P
Sbjct: 1321 HFHAHGPVPGPQHYTLGRPGRAPRRGAGG-----------HPQFAPHGRHPLHQPTSPLP 1369
Query: 183 APLPLPLPPPAPAA-----LCPRDPRAPAACSAP--PGAAPPAAAASPPASPAPASSP 233
P P PPA + P+ A A PG+ PP + S P P SP
Sbjct: 1370 LYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSP 1427
Score = 38.5 bits (88), Expect = 0.011
Identities = 60/219 (27%), Positives = 81/219 (36%), Gaps = 47/219 (21%)
Query: 132 PAPRGCAAAAAAGAPA--------------GGAGALSELPGCAALQPPHGAPHRGQPLEP 177
P P G A+A+++ A + GG G L + G + LQ H +G
Sbjct: 1222 PPPTGQASASSSSASSTHHHHHHHHHGHSHGGLGVLPD--GQSKLQALHAQYCQG----- 1274
Query: 178 LQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPP----GAAPPAAAASPPASPAPASSP 233
PGPAP P LPP P+ P P+ P PP G+ PP PPAS P
Sbjct: 1275 --PGPAPPPY-LPPQQPSL--PPPPQQP-----PPLPQLGSIPP-----PPASAPPVGPH 1319
Query: 234 GFY--RGAYPTPSDFGLHCSSQTTVLDLDTHVVTTVENGY-LHQDCCASAHCPCCGQGAP 290
+ G P P + L + H + LHQ ++ P AP
Sbjct: 1320 RHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRHPLHQ---PTSPLPLYSP-AP 1375
Query: 291 GPGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGA 329
A G K + + AGG G+ PPGG+
Sbjct: 1376 QHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPGGS 1414
Score = 33.9 bits (76), Expect = 0.27
Identities = 45/175 (25%), Positives = 49/175 (28%), Gaps = 48/175 (27%)
Query: 90 GPLQLGGG--GDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPA 147
GP Q+ G A A +A H H H H H H G
Sbjct: 1216 GPFQMPPPPTGQASASSSSASSTHHHHHHHH--------HGHSH---------GGLGVLP 1258
Query: 148 GGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP-----PPAPAALCPRDP 202
G L L P P P +P P P P PLP PP PA+ P P
Sbjct: 1259 DGQSKLQALHAQYCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQLGSIPPPPASAPPVGP 1318
Query: 203 RAPAACSAP-----------PGAAPPAAAAS-------------PPASPAPASSP 233
P PG AP A P SP P SP
Sbjct: 1319 HRHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRHPLHQPTSPLPLYSP 1373
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 58.2 bits (139), Expect = 1e-08
Identities = 45/144 (31%), Positives = 54/144 (37%), Gaps = 18/144 (12%)
Query: 101 EAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAP----RGCAAAAAAGAPAGGAGALSEL 156
+ ++P + Q HQ Q HQ Q P P A PA G G+
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSA--- 124
Query: 157 PGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPP----APAALCPRDPRAPAACSAPP 212
P ++ PP P G P PG P P P PPP AP P P + + PP
Sbjct: 125 PPASSSAPPATPPTSGAP-----PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPP 179
Query: 213 --GAAPPAAAASPPASPAPASSPG 234
G PP AA P P P PG
Sbjct: 180 QAGGPPPPPAAVPGPGPGPKQGPG 203
Score = 50.1 bits (118), Expect = 4e-06
Identities = 41/131 (31%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 126 LHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPL 185
LH + P P G G G G P + PP + QP P QP P
Sbjct: 28 LHDFRSPPP-GMGLNQNRGPMGPGPGQSGPKP---PIPPPPPHQQQQQP-PPQQPPPQQP 82
Query: 186 PLPLPPPAPAALCPRDPRAPAACSAPP------------GAAPPAAAASPPASPAPASS- 232
P PPP P + P P S+ P G+APPA++++PPA+P + +
Sbjct: 83 PPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAP 142
Query: 233 PGFYRGAYPTP 243
PG G PTP
Sbjct: 143 PGSGPGPTPTP 153
Score = 40.0 bits (92), Expect = 0.004
Identities = 48/191 (25%), Positives = 54/191 (28%), Gaps = 36/191 (18%)
Query: 60 QQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQ 119
QQ QPP H H P P ++ P+ G G A A
Sbjct: 80 QQPPPHQPPPHPQPHQQQQPPPPPQDSSK--PVVAQGPGPAPGVGSAP------------ 125
Query: 120 LHLQQQLHQHQHPAPRGCAAAA--AAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEP 177
PA A +GAP G + P A P GAP P P
Sbjct: 126 ------------PASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP---PPTPP 170
Query: 178 LQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYR 237
P P PP P A P P P G P P P PG
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGG----PKGGKMPGGPKPGGGPGLST 226
Query: 238 -GAYPTPSDFG 247
G +P P G
Sbjct: 227 PGGHPKPPHRG 237
Score = 35.0 bits (79), Expect = 0.12
Identities = 31/103 (30%), Positives = 36/103 (34%), Gaps = 13/103 (12%)
Query: 148 GGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPA---PLPLPLPPPAPAALCPRDPRA 204
GG G L + PP G Q P+ PGP P P PPP P+
Sbjct: 23 GGRGGLHDFRS-----PPPGMG-LNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQ 76
Query: 205 PAACSAPPGAAP----PAAAASPPASPAPASSPGFYRGAYPTP 243
P PP P P PP P +S P +G P P
Sbjct: 77 PPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAP 119
Score = 32.7 bits (73), Expect = 0.60
Identities = 30/100 (30%), Positives = 34/100 (34%), Gaps = 16/100 (16%)
Query: 148 GGAGALSELPGCAALQPPHGAPHRGQPLEPL--QPGPAPLPLPLPPPAPAALCPRDPRAP 205
GG G L + P G P+ P Q GP P P+P PPP P
Sbjct: 20 GGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKP-PIPPPPPHQQQQQP------ 72
Query: 206 AACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPSD 245
PP PP PP P P P + P P D
Sbjct: 73 -----PPQQPPPQQP--PPHQPPPHPQPHQQQQPPPPPQD 105
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 57.4 bits (137), Expect = 2e-08
Identities = 63/224 (28%), Positives = 77/224 (34%), Gaps = 25/224 (11%)
Query: 133 APRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRG------QPLEPLQPGPAPLP 186
+P G A A A G GA E P +P G P R +PL P P P
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAK 125
Query: 187 LPLPPPAPAALCPRDPRAPAACS----APPGAAPPAAAASPPASPAPASSPGFYRGAYPT 242
L PP A C P A A + AP G A PA A+ A P PG G P
Sbjct: 126 LRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPG 185
Query: 243 PSDFGLHCSSQT---TVLDLDTH-----VVTTVENGYLHQDCCASAHCPCCGQGAPGPGL 294
P ++QT + L++H V+ V NG +A P APG +
Sbjct: 186 PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNG-------PAALLPLPKPAAPGTVI 238
Query: 295 ASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAPCKRAR 338
+ P A A P P AP AR
Sbjct: 239 QTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLAR 282
Score = 56.2 bits (134), Expect = 5e-08
Identities = 45/123 (36%), Positives = 47/123 (38%), Gaps = 17/123 (13%)
Query: 129 HQHPAPRGCAAAAAA----------GAPAGGAGA-----LSELPGCAALQPPHG--APHR 171
H H APR AAA G+PAG AGA PG A PP G P
Sbjct: 40 HHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGG 99
Query: 172 GQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPAS 231
G P P P P +P P PAA P A AP AA AA PA PA
Sbjct: 100 GGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
Query: 232 SPG 234
G
Sbjct: 160 PAG 162
Score = 56.2 bits (134), Expect = 5e-08
Identities = 61/183 (33%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPL-QPGPAPL-PLPL 189
P P G G PAG GA L G AAL H H P L GPA L PLP
Sbjct: 176 PGP-GPGPGPGPGKPAG-PGAAQTLNGSAALLNSH---HAAAPAVSLVNNGPAALLPLPK 230
Query: 190 P---------PPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAY 240
P PP A P P AP+ +AP AAP AA PP +PA + P +
Sbjct: 231 PAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGP 290
Query: 241 PTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCG-----QGAPGPGLA 295
PT + +NG A A P G G PGPG A
Sbjct: 291 PTAAPA--------------VPPPAAAQNG--GSAGAAPAPAPAAGGPAGVSGQPGPGAA 334
Query: 296 SAA 298
+AA
Sbjct: 335 AAA 337
Score = 43.5 bits (101), Expect = 3e-04
Identities = 50/132 (37%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 133 APRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPP 192
AP A AAA P L+ PG A PP AP P G A P P
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPA-GPPTAAPAVPPPAAAQNGGSAGAA---PAP 315
Query: 193 APAALCPR----DPRAPAACSAP-PG-----------AAPPAA---AASPPASPAPASSP 233
APAA P P AA +AP PG AAPPAA AAS PAS A +
Sbjct: 316 APAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVI 375
Query: 234 G-FYRGAYPTPS 244
G +GA P+P+
Sbjct: 376 GPTMQGALPSPA 387
Score = 43.1 bits (100), Expect = 4e-04
Identities = 60/195 (30%), Positives = 66/195 (33%), Gaps = 52/195 (26%)
Query: 76 AYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAP- 134
A A PG P GP G G + P A L+ L L+ H AP
Sbjct: 168 ARAGPG-PGPGPGPGP----GPGPGKPAGPGAAQTLNGSAAL--------LNSHHAAAPA 214
Query: 135 -----RGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPL 189
G AA PA + P A PP A P P PA P P
Sbjct: 215 VSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAP-SPPAAPAPAAPAAAPPP- 272
Query: 190 PPPAPAALC--PRDPRAP--AACSAPP----------GAAP-----------------PA 218
PPPAPA L P P P AA + PP GAAP P
Sbjct: 273 PPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG 332
Query: 219 AAASPPASPAPASSP 233
AAA+ PA A SP
Sbjct: 333 AAAAAPAPGVKAESP 347
Score = 40.4 bits (93), Expect = 0.003
Identities = 38/137 (27%), Positives = 45/137 (32%), Gaps = 30/137 (21%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP 191
PAP A +G P GA A + PG A P + P
Sbjct: 315 PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKR-------------------VVQAAP 355
Query: 192 PAPAALCPRDPRAPAAC----SAPPGAAPPAAAASPPASPAPASSPGFYRGAY------- 240
PA L P + AA GA P AA PPA P P GA
Sbjct: 356 PAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRT 415
Query: 241 PTPSDFGLHCSSQTTVL 257
PT + G+ + TVL
Sbjct: 416 PTATTSGIRATLTPTVL 432
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 57.4 bits (137), Expect = 2e-08
Identities = 45/121 (37%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 133 APRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPL------- 185
APRG AAAAA AP A P A P AP P P P
Sbjct: 114 APRGAPAAAAAAAPPP-TPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQ 172
Query: 186 ---PLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPT 242
PL PPPAPAA P A A + P A PPA AA P P P P + P
Sbjct: 173 RAAPLAAPPPAPAA-----PPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPP 227
Query: 243 P 243
P
Sbjct: 228 P 228
Score = 49.7 bits (117), Expect = 5e-06
Identities = 37/85 (43%), Positives = 39/85 (45%), Gaps = 20/85 (23%)
Query: 165 PHGAPHRGQPLEPLQPGPAPLPLPLPPPAP--AALCPRDPR-APAACSAPPG-------- 213
P AP RG P P P P P PPPAP AA R PR A AA +APP
Sbjct: 111 PPRAP-RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGP 169
Query: 214 --------AAPPAAAASPPASPAPA 230
AAPP A A+PPA PA
Sbjct: 170 RAQRAAPLAAPPPAPAAPPAVAPPA 194
Score = 48.1 bits (113), Expect = 1e-05
Identities = 40/113 (35%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQP----PHGAPHRGQPLEPLQP---GPAP 184
P P AAAA A AP A A + P QP AP P P P P
Sbjct: 135 PPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPA 194
Query: 185 LPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYR 237
P PPPA AA R+P P P APP PP P P G R
Sbjct: 195 GPRRAPPPAVAA---REPPLP---PPPQPPAPPQQQQPPPPQPQPPPEGGAVR 241
Score = 44.3 bits (103), Expect = 2e-04
Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 160 AALQPPH-GAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPA 218
A +QPP GA P P + PA PPP PA P P AP A +A P AP A
Sbjct: 97 ARVQPPRRGATPPAPPRAP-RGAPAAAAAAAPPPTPA---PPPPPAPVAAAA-PARAPRA 151
Query: 219 AAASPPASPAPA-SSPG 234
AAA+ A P+P + PG
Sbjct: 152 AAAAATAPPSPGPAQPG 168
Score = 37.0 bits (84), Expect = 0.032
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 175 LEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPG 234
++P + G P P PP AP P A AA + PP APP A P A+ APA +P
Sbjct: 99 VQPPRRGATP---PAPPRAPRGA----PAAAAAAAPPPTPAPPPPPA-PVAAAAPARAPR 150
Query: 235 FYRGAYPTPSDFG 247
A P G
Sbjct: 151 AAAAAATAPPSPG 163
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 57.0 bits (136), Expect = 3e-08
Identities = 40/110 (36%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 133 APRGCAAAAAAGAP----AGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLP 188
APR A A A P A L E P P P+ L P PAP P P
Sbjct: 94 APRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAP 153
Query: 189 LPPP-----APAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
+ P A A L P APA AP A PA A +P +PAPA +P
Sbjct: 154 VAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAP 203
Score = 50.4 bits (119), Expect = 3e-06
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 124 QQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPA 183
+QL PAP APA P A + P AP + L P PA
Sbjct: 123 EQLPSVPVPAPASTPPPVPVLAPAPA-------PAPAPVAAPVAAP---VAVAVLAPAPA 172
Query: 184 PLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRG 238
P P P P PAP A APA AP A PA A +P A+P ++ G +G
Sbjct: 173 PAPAPAPAPAPVA-------APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 220
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 57.0 bits (136), Expect = 3e-08
Identities = 40/110 (36%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 133 APRGCAAAAAAGAP----AGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLP 188
APR A A A P A L E P P P+ L P PAP P P
Sbjct: 94 APRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAP 153
Query: 189 LPPP-----APAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
+ P A A L P APA AP A PA A +P +PAPA +P
Sbjct: 154 VAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAP 203
Score = 50.4 bits (119), Expect = 3e-06
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 124 QQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPA 183
+QL PAP APA P A + P AP + L P PA
Sbjct: 123 EQLPSVPVPAPASTPPPVPVLAPAPA-------PAPAPVAAPVAAP---VAVAVLAPAPA 172
Query: 184 PLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRG 238
P P P P PAP A APA AP A PA A +P A+P ++ G +G
Sbjct: 173 PAPAPAPAPAPVA-------APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 220
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 57.0 bits (136), Expect = 3e-08
Identities = 40/110 (36%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 133 APRGCAAAAAAGAP----AGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLP 188
APR A A A P A L E P P P+ L P PAP P P
Sbjct: 105 APRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAP 164
Query: 189 LPPP-----APAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
+ P A A L P APA AP A PA A +P +PAPA +P
Sbjct: 165 VAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAP 214
Score = 50.4 bits (119), Expect = 3e-06
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 124 QQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPA 183
+QL PAP APA P A + P AP + L P PA
Sbjct: 134 EQLPSVPVPAPASTPPPVPVLAPAPA-------PAPAPVAAPVAAP---VAVAVLAPAPA 183
Query: 184 PLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRG 238
P P P P PAP A APA AP A PA A +P A+P ++ G +G
Sbjct: 184 PAPAPAPAPAPVA-------APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 231
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 57.0 bits (136), Expect = 3e-08
Identities = 47/122 (38%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 123 QQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGP 182
QQQ Q P P AA AP G L P +A P G+P G E L
Sbjct: 12 QQQQQQQLSPPP------PAALAPVSGV-VLPAPPAVSAGSSPAGSPGGGAGGEGLGAAA 64
Query: 183 APLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPT 242
A L L PPP P A P P PP A+ A A+ PPA P A+ PG GA PT
Sbjct: 65 AALLLHPPPPPPPATAAPPPPPP---PPPPPASAAAPASGPPAPPGLAAGPGPAGGA-PT 120
Query: 243 PS 244
P+
Sbjct: 121 PA 122
Score = 54.7 bits (130), Expect = 1e-07
Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 132 PAPRGCAAAAA-AGAPAGGAGA--LSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLP 188
PAP +A ++ AG+P GGAG L L PP P P P P P P
Sbjct: 36 PAPPAVSAGSSPAGSPGGGAGGEGLGAAAAALLLHPPPPPP-------PATAAPPPPPPP 88
Query: 189 LPPPAPAALCPRDPRAPAACSAPPGAA-----PPAAAASPPASPAP 229
PPPA AA P AP +A PG A P A S A+P P
Sbjct: 89 PPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPALVAGSSAAAPFP 134
Score = 37.7 bits (86), Expect = 0.019
Identities = 36/113 (31%), Positives = 39/113 (34%), Gaps = 28/113 (24%)
Query: 163 QPPHGAPHRGQPLEPLQPGP----APLP---LPLPPPAPAALCPRDP------------R 203
QPP P + Q + L P P AP+ LP PP A P
Sbjct: 4 QPPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAA 63
Query: 204 APAACSAPPGAAPPAAAASPPASP---------APASSPGFYRGAYPTPSDFG 247
A A PP PPA AA PP P APAS P G P G
Sbjct: 64 AAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAG 116
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 57.0 bits (136), Expect = 3e-08
Identities = 55/182 (30%), Positives = 59/182 (32%), Gaps = 51/182 (28%)
Query: 76 AYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPR 135
A P MP AA GP G P A H H H H HP P
Sbjct: 260 AMPPPPMPPGAAGHGPPSAG--------TPGAGHPGHG-------------HSHPHPFPP 298
Query: 136 GCAAAAAAGAPAGGAGALSELPGCAALQPPHGA--PHRGQPLEPLQPGPAPLP-LPLPPP 192
G G P G + A PHG PH G P QP P P P +P P P
Sbjct: 299 G-------GMPHPGMSQMQ-----LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGP 346
Query: 193 APAALCPRDP-----------RAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYP 241
P + PR P P PP PP PP P G+ RG P
Sbjct: 347 PPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPP----PYGYQRGPLP 402
Query: 242 TP 243
P
Sbjct: 403 PP 404
Score = 35.8 bits (81), Expect = 0.071
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 164 PPHGAPHR-----GQPLEPLQPG-PAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPP 217
PP AP+ G L P PG P P P P P P AL P P A PP P
Sbjct: 216 PPPSAPNPVVSSLGSGLPP--PGMPPPGSFPPPVPPPGAL---PPGIPPAMPPPP-MPPG 269
Query: 218 AAAASPPASPAPASSPGFYRGAYPTP 243
AA PP++ P + + ++P P
Sbjct: 270 AAGHGPPSAGTPGAGHPGHGHSHPHP 295
Score = 30.4 bits (67), Expect = 3.0
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 191 PPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTP 243
PP P+A P + PP PP + PP P A PG P P
Sbjct: 215 PPPPSA--PNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPP 265
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 56.6 bits (135), Expect = 4e-08
Identities = 38/96 (39%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG AA+ PP P G PL P PG P PLP +P PPP P A
Sbjct: 938 PGAGIPPPPPLPG-AAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 996
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 997 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1032
Score = 53.5 bits (127), Expect = 3e-07
Identities = 40/110 (36%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP 186
P P G A P G LPG A + PP P G P P PG P PLP
Sbjct: 947 PLP-GAAIPPPPPLPGAGIPLPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1004
Query: 187 ---LPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
+P PPP P A P P P A PP P A PP P P
Sbjct: 1005 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1054
Score = 52.4 bits (124), Expect = 7e-07
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 971 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1029
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 1030 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1065
Score = 52.4 bits (124), Expect = 7e-07
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 982 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1040
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 1041 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1076
Score = 52.4 bits (124), Expect = 7e-07
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 993 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1051
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 1052 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1087
Score = 52.4 bits (124), Expect = 7e-07
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 1004 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1062
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 1063 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1098
Score = 52.0 bits (123), Expect = 1e-06
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 1015 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1073
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 1074 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1109
Score = 51.6 bits (122), Expect = 1e-06
Identities = 38/104 (36%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALS--ELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPL 189
P P A P GAG L LPG A + PP P P P PG +PL
Sbjct: 911 PPPPLPGAGIPPPPPLPGAGILPLPPLPG-AGIPPPPPLPGAAIPPPPPLPGAG---IPL 966
Query: 190 PPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
PPP P A P P P A PP P A PP P P
Sbjct: 967 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1010
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 1059 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAG 1117
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P A PP P P
Sbjct: 1118 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPP 1153
Score = 50.8 bits (120), Expect = 2e-06
Identities = 35/96 (36%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 1070 PGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAG 1128
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P PP P P
Sbjct: 1129 IPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPP 1164
Score = 49.3 bits (116), Expect = 6e-06
Identities = 35/96 (36%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAAL 197
P G LPG A + PP P G P P PG P PLP +P PPP P A
Sbjct: 1103 PGVGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAG 1161
Query: 198 CPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P P P A PP P PP P P
Sbjct: 1162 IPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPP 1197
Score = 46.6 bits (109), Expect = 4e-05
Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELP-GCAALQPPHGAPHRGQPLEPLQPG-----PAPL 185
P P A P GAG P + PP P G P P PG P PL
Sbjct: 1120 PPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1179
Query: 186 P---LPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P +P PPP P P P P A PP PP P +PAP P
Sbjct: 1180 PGVGIPPPPPLPGVGIPPPPPLPGAGIPPP---PPLPGMGIPPAPAPPLPP 1227
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/91 (36%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLP---LPLPPPAPAALCPRDP 202
P G LPG A + PP P G P P P PLP +P PPP P A P P
Sbjct: 1037 PGAGIPPPPPLPG-AGIPPPPPLPGAGIP--P----PPPLPGAGIPPPPPLPGAGIPPPP 1089
Query: 203 RAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P A PP P PP P P
Sbjct: 1090 PLPGAGIPPPPPLPGVGIPPPPPLPGAGIPP 1120
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/91 (36%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLP---LPLPPPAPAALCPRDP 202
P G LPG A + PP P G P P P PLP +P PPP P A P P
Sbjct: 1048 PGAGIPPPPPLPG-AGIPPPPPLPGAGIP--P----PPPLPGAGIPPPPPLPGAGIPPPP 1100
Query: 203 RAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P PP P A PP P P
Sbjct: 1101 PLPGVGIPPPPPLPGAGIPPPPPLPGAGIPP 1131
Score = 43.9 bits (102), Expect = 3e-04
Identities = 40/110 (36%), Positives = 42/110 (38%), Gaps = 23/110 (20%)
Query: 156 LPGCAALQPPHGAPHRGQPLEPLQPG-----PAPLP---LPLPPPAPAALCPRDPR---- 203
LPG A + PP P G P P PG P PLP +P PPP P A P P
Sbjct: 1157 LPG-AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGM 1215
Query: 204 ----APAACSAPPGAAPPAAAASPPASP--APASSPGFYRGAYPTPSDFG 247
APA PPG P PP P P P PTP G
Sbjct: 1216 GIPPAPAPPLPPPGTGIP----PPPLLPVSGPPLLPQVGSSTLPTPQVCG 1261
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/80 (41%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 156 LPGCAALQPPHGAPHRGQPLEPLQPGPAPLP---LPLPPPAP-AALCPRDPRAPAACSAP 211
LP A QPP P +G E L P P PLP +P PPP P A + P P A P
Sbjct: 891 LPSTAIPQPP---PLQGT--EMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP 945
Query: 212 PGAAPPAAAASPPASPAPAS 231
P P AA PP P P +
Sbjct: 946 P---PLPGAAIPPPPPLPGA 962
Score = 43.1 bits (100), Expect = 4e-04
Identities = 31/91 (34%), Positives = 33/91 (36%), Gaps = 10/91 (10%)
Query: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLP---LPLPPPAPAALCPRDP 202
P G LPG PP P G + P P PLP +P PPP P A P P
Sbjct: 1092 PGAGIPPPPPLPGVGIPPPP---PLPGAGIPP----PPPLPGAGIPPPPPLPGAGIPPPP 1144
Query: 203 RAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P PP P A PP P P
Sbjct: 1145 PLPRVGIPPPPPLPGAGIPPPPPLPGAGIPP 1175
Score = 41.2 bits (95), Expect = 0.002
Identities = 48/151 (31%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 104 EPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSEL----PGC 159
+ A R Q Q QL QL LQQQ Q Q AA A +P GA + P
Sbjct: 200 QQAIRLQQQQQQQL-QLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFLLGPSG 258
Query: 160 AALQPPHGAPHRGQPLEPLQPGPAPLPL----PLPPPAPAALCPRD-PRAPAACSAPPGA 214
A + P G+P Q L L P L P PP+P L + P PAA A +
Sbjct: 259 GAGEAP-GSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDS 317
Query: 215 APPAAAASPPASPAPASSPGFYRGAYPTPSD 245
A P A P ++ RGA T +
Sbjct: 318 PSSTAFPFPEAGPGEEAAGAPVRGAGDTDEE 348
Score = 38.9 bits (89), Expect = 0.008
Identities = 33/119 (27%), Positives = 40/119 (33%), Gaps = 10/119 (8%)
Query: 124 QQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGA---------PHRGQP 174
Q H+H + + + P + S +PG + PP P P
Sbjct: 838 QTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIP 897
Query: 175 LEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
P G LP P PPP P A P P P A P P A PP P A P
Sbjct: 898 QPPPLQGTEMLP-PPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPP 955
Score = 37.4 bits (85), Expect = 0.024
Identities = 55/222 (24%), Positives = 72/222 (32%), Gaps = 39/222 (17%)
Query: 35 LVSYVLRNARQLYLSERYAELYRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQL 94
L+S + + R ++ +L +QQQQQQQ + A P + L
Sbjct: 195 LLSDIQQAIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFLL 254
Query: 95 G--GGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAA------------ 140
G GG P L L L + + Q P+P G +
Sbjct: 255 GPSGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAA 314
Query: 141 ------------------AAAGAPAGGAGALSELPGCAALQ-PPHGAPHRGQPLEPLQPG 181
AAGAP GAG E A + P G+P G+ P
Sbjct: 315 KDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGSP--GEEWAPEVGE 372
Query: 182 PAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASP 223
AP L P A + P APAA S P AP P
Sbjct: 373 DAPQRLGEEPEEEA----QGPDAPAAASLPGSPAPSQRCFKP 410
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 56.2 bits (134), Expect = 5e-08
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 132 PAPRGCAAAAAAGAPA--GGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPL 189
P+P AA AAA +PA G A + + AA+ P A Q + P P P P P +
Sbjct: 518 PSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQ-VAPAAPAPVPAPALV 576
Query: 190 PPPAPAAL---CPRDPRAPAACSA---PPGAAPPAAAASPPASPAPASSPGFYRGAYPT 242
P PAPAA P +AP + A P P A A +PA+ PG +R + P+
Sbjct: 577 PVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPS 635
Score = 48.1 bits (113), Expect = 1e-05
Identities = 47/165 (28%), Positives = 57/165 (34%), Gaps = 32/165 (19%)
Query: 75 LAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAP 134
+A AA PA+AA P A A PAA Q+ PA
Sbjct: 504 VAVAAAAAPAAAA--APSPATAAATAAAVSPAAAGQI--------------------PAA 541
Query: 135 RGCAAAAAAGAPAGGAGALSELPGCAALQP-----PHGAPHRGQPLEPLQP-----GPAP 184
A+AAA A A A+ P A P P AP Q P Q PA
Sbjct: 542 ASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAV 601
Query: 185 LPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAP 229
P P P P PA P +PA P + P+ +P + P
Sbjct: 602 APTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSLTCNPDKTDGP 646
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/136 (33%), Positives = 52/136 (38%), Gaps = 23/136 (16%)
Query: 132 PAPRGCAAAAAA------------GAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQ 179
PAP AA AAA A A A A + P AA P A + P
Sbjct: 475 PAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAA 534
Query: 180 PGPAPLPLPL-------PPPAPAALCPRDPRAPAACSAP---PGAAPPAAAASPPA-SPA 228
G P + P A AA P APA AP P AP AA AS PA + A
Sbjct: 535 AGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQA 594
Query: 229 PASSPGFYRGAYPTPS 244
P S+P PTP+
Sbjct: 595 PTSAPAVAPTPAPTPT 610
Score = 29.3 bits (64), Expect = 6.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 183 APLPLPLPPPAPAALCPRDPRAPAACSAPPGAAP--PAAAASPPASPAPASSPGFYRGAY 240
AP+ +P P A A A + AAP AAAA+P A+ AP+ + A
Sbjct: 470 APISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAA 529
Query: 241 PTPSDFG 247
+P+ G
Sbjct: 530 VSPAAAG 536
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 56.2 bits (134), Expect = 5e-08
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 132 PAPRGCAAAAAAGAPA--GGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPL 189
P+P AA AAA +PA G A + + AA+ P A Q + P P P P P +
Sbjct: 927 PSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQ-VAPAAPAPVPAPALV 985
Query: 190 PPPAPAAL---CPRDPRAPAACSA---PPGAAPPAAAASPPASPAPASSPGFYRGAYPT 242
P PAPAA P +AP + A P P A A +PA+ PG +R + P+
Sbjct: 986 PVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPS 1044
Score = 48.1 bits (113), Expect = 1e-05
Identities = 47/165 (28%), Positives = 57/165 (34%), Gaps = 32/165 (19%)
Query: 75 LAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAP 134
+A AA PA+AA P A A PAA Q+ PA
Sbjct: 913 VAVAAAAAPAAAA--APSPATAAATAAAVSPAAAGQI--------------------PAA 950
Query: 135 RGCAAAAAAGAPAGGAGALSELPGCAALQP-----PHGAPHRGQPLEPLQP-----GPAP 184
A+AAA A A A+ P A P P AP Q P Q PA
Sbjct: 951 ASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAV 1010
Query: 185 LPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAP 229
P P P P PA P +PA P + P+ +P + P
Sbjct: 1011 APTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSLTCNPDKTDGP 1055
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/136 (33%), Positives = 52/136 (38%), Gaps = 23/136 (16%)
Query: 132 PAPRGCAAAAAA------------GAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQ 179
PAP AA AAA A A A A + P AA P A + P
Sbjct: 884 PAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAA 943
Query: 180 PGPAPLPLPL-------PPPAPAALCPRDPRAPAACSAP---PGAAPPAAAASPPA-SPA 228
G P + P A AA P APA AP P AP AA AS PA + A
Sbjct: 944 AGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQA 1003
Query: 229 PASSPGFYRGAYPTPS 244
P S+P PTP+
Sbjct: 1004 PTSAPAVAPTPAPTPT 1019
Score = 31.2 bits (69), Expect = 1.7
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 59 QQQQQQQQPPHHQHQH 74
QQQQQQQQ HH H H
Sbjct: 376 QQQQQQQQQHHHHHHH 391
Score = 29.6 bits (65), Expect = 5.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 55 LYRRQQQQQQQQPPHHQHQHLAYAAP 80
L ++QQQQQQQ HH HQ P
Sbjct: 374 LSQQQQQQQQQHHHHHHHQQQQQQQP 399
Score = 29.3 bits (64), Expect = 6.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 183 APLPLPLPPPAPAALCPRDPRAPAACSAPPGAAP--PAAAASPPASPAPASSPGFYRGAY 240
AP+ +P P A A A + AAP AAAA+P A+ AP+ + A
Sbjct: 879 APISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAA 938
Query: 241 PTPSDFG 247
+P+ G
Sbjct: 939 VSPAAAG 945
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 56.2 bits (134), Expect = 5e-08
Identities = 63/199 (31%), Positives = 76/199 (38%), Gaps = 30/199 (15%)
Query: 45 QLYLSERYAELYRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEARE 104
Q++ R A+L R ++ QQQ Q Q A AAP +PA++A Q G G A E
Sbjct: 10 QVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASA--SAPQRGPSGILPAAE 67
Query: 105 PAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQP 164
P + LHQ A G A G PA ALS PG
Sbjct: 68 PT----ICSLHQ----------------AWGGPGCRAQKGIPA----ALSPGPGPIPAPI 103
Query: 165 PHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPP 224
P A G PL PGP P P +P P PA + P P P P + P
Sbjct: 104 PGPAQIPG-PLPGSIPGPIPGPAQIPSPIPAPI-PGPISGPVQIPGPFRGPIPGPISGPA 161
Query: 225 ASPAPASSPGFYRGAYPTP 243
P P S P + G P P
Sbjct: 162 PIPGPISGP--FSGPNPGP 178
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/140 (32%), Positives = 52/140 (37%), Gaps = 31/140 (22%)
Query: 122 LQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPG----------CAALQPPHGAPHR 171
LQQQ + P RG A AA PA A A P C+ Q G R
Sbjct: 26 LQQQ--PQRVPGQRGRGARAAPLVPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCR 83
Query: 172 GQPLEP--LQPGPAPLPLPLPPPA--PAALCPRDPRAPAACSAPPGAAP-PAAAASPPAS 226
Q P L PGP P+P P+P PA P L PG+ P P + S
Sbjct: 84 AQKGIPAALSPGPGPIPAPIPGPAQIPGPL--------------PGSIPGPIPGPAQIPS 129
Query: 227 PAPASSPGFYRGAYPTPSDF 246
P PA PG G P F
Sbjct: 130 PIPAPIPGPISGPVQIPGPF 149
Score = 33.1 bits (74), Expect = 0.46
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 156 LPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRA 204
LPG A + P P G PAP+P P PAPA L P+ P A
Sbjct: 299 LPGLAPILGPGSGPGSGSV-------PAPIPGPGSLPAPAPLWPQSPDA 340
Score = 31.6 bits (70), Expect = 1.3
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query: 180 PGP--APLPLPLPPPAPAALCPRDP-RAPAACSAP---PGAAPPAAAASPPAS---PAPA 230
PGP P+P P P P L P +P +P PG AP S P S PAP
Sbjct: 262 PGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPI 321
Query: 231 SSPG 234
PG
Sbjct: 322 PGPG 325
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 55.5 bits (132), Expect = 9e-08
Identities = 41/115 (35%), Positives = 47/115 (40%), Gaps = 19/115 (16%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP 191
P P G AA P G G++S P + GQ P P P+P P P PP
Sbjct: 127 PRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMG--------GQYPTPNMPYPSPGPYPAPP 178
Query: 192 PAPAALCPRDPRAPAACSAPP-GAAPPAAAASPPASPAPASSPGFYRGAYPTPSD 245
P P+AP A P G PP A P PAP S G YPTPS+
Sbjct: 179 P---------PQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYP-TPGLYPTPSN 223
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Query: 138 AAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAAL 197
A A +PA + + PG QPP G P P P+ +P LPP A +
Sbjct: 8 ADALPEHSPAKTSAVSNTKPG----QPPQGWPGSNPWNNP--SAPSSVPSGLPPSATPST 61
Query: 198 CPRDPRAPAAC--SAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPS 244
P P AP S PP PP A P S PG G YP P+
Sbjct: 62 VPFGP-APTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPG---GPYPAPT 106
Score = 34.3 bits (77), Expect = 0.21
Identities = 38/134 (28%), Positives = 43/134 (32%), Gaps = 31/134 (23%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPL-PLPLP 190
PAP G + P G A P PP G P+ P PGP P P P P
Sbjct: 66 PAPTGMYPSVPPTGPPPGPPA--PFPPSGPSCPPPGGPYPA----PTVPGPGPTGPYPTP 119
Query: 191 -------------PPAPAALCP--------RDPRAPAACSAPPGAAPPAAAASPPASPAP 229
P PAA P P AP P P + P +P P
Sbjct: 120 NMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPP 179
Query: 230 ASSPGFYRGAYPTP 243
+PG A P P
Sbjct: 180 PQAPG---AAPPVP 190
Score = 30.8 bits (68), Expect = 2.3
Identities = 33/113 (29%), Positives = 40/113 (35%), Gaps = 25/113 (22%)
Query: 134 PRGCAAAAAAGAPAGGAGALSELPGCAALQP-PHGAPHRGQPLEPLQPGPAPLPL-PLPP 191
P+G + P+ + S LP A P G G GP P P P PP
Sbjct: 31 PQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPP 90
Query: 192 PAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPS 244
P+ CP PPG PA P P P + G YPTP+
Sbjct: 91 SGPS--CP-----------PPGGPYPA-----PTVPGPGPT-----GPYPTPN 120
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 55.1 bits (131), Expect = 1e-07
Identities = 70/231 (30%), Positives = 80/231 (34%), Gaps = 47/231 (20%)
Query: 127 HQHQHPAPR-----GCAAAAAAGAPAGGAGALSELP-GCAALQPPHGAPHRGQPLEPLQP 180
H H HP P G AAA GA G A G P +GAP P
Sbjct: 232 HPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAP---------PP 282
Query: 181 GPAPLPLPLPPP----APAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFY 236
GPAP P P P A AA P P +A P PP A+ A APA +P
Sbjct: 283 GPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASG 342
Query: 237 RGAYPTPSDF------GLHCSSQTTVLDLDTHVVTT---VENGYLHQDCCASAHCPCCGQ 287
G P P+ L C+ L T + L Q A G
Sbjct: 343 SGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDA-----GG 397
Query: 288 GAPGPGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPG------GAPFA 332
GA G G + AG + + D GG GA PPG G PFA
Sbjct: 398 GAGGGG--AGAGQRPSF------SIDHIMGHGGGGAAPPGAGEGSPGPPFA 440
Score = 51.6 bits (122), Expect = 1e-06
Identities = 80/269 (29%), Positives = 98/269 (36%), Gaps = 65/269 (24%)
Query: 55 LYRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQL 114
L RR++ ++Q PP H H H P L GG A A +P A
Sbjct: 217 LRRRKRFKRQPLPPPHPHPHP--------------HPELLLRGGAAAAGDPGAFLPGFAA 262
Query: 115 HQLHQLHLQQQL----------HQHQHPAPRGCA-AAAAAGAPAGGAGALSELPGCAALQ 163
+ + L H HP P A AAAAA AP LS PG AA
Sbjct: 263 YGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAAAAAAPC----QLSVPPGRAAAP 318
Query: 164 PPHGAPHRGQPLEPL------QPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPP 217
PP G P + P PAP P P PA L PA A G A
Sbjct: 319 PP------GPPTASVFAGAGSAPAPAPASGSGPGPGPAGL-------PAFLGAELGCAKA 365
Query: 218 --AAAASPPASPAPASSP-GFYRGAYPTPSDFGL----HCSSQTTVLDLDTHVVTTVENG 270
AA+ SPPA+ A P R T + G + Q +D H++ G
Sbjct: 366 FYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSID-HIMGHGGGG 424
Query: 271 YLHQDCCASAHCPCCGQGAPGPGLASAAG 299
A P G+G+PGP A+AAG
Sbjct: 425 ---------AAPPGAGEGSPGPPFAAAAG 444
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 55.1 bits (131), Expect = 1e-07
Identities = 74/291 (25%), Positives = 92/291 (31%), Gaps = 46/291 (15%)
Query: 62 QQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLH 121
+Q+ +PP + Q+L AA A E + + H + Q
Sbjct: 156 EQRIEPPDRRWQYLLMAAEPYETIAFKVP--------SREIDKAEGKFWTHWNRETKQFF 207
Query: 122 LQQQLHQHQHPAPRGCAAA--AAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQ 179
LQ + PAP A P L P PP P G PL P+
Sbjct: 208 LQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPP--PPPGGLPLPPMP 265
Query: 180 P-GPAPL----PLPLPPPAPAALCPRD----------PRAPAACSAPPGAAPPAAAASPP 224
P GPAP P LPPPAP P P AP PG PPA PP
Sbjct: 266 PTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPP 325
Query: 225 ASPAPASSPGFYRGAYPT-PSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCP 283
S +PG + A P G+H + +H P
Sbjct: 326 TSGVHPPAPGVHPPAPGVHPPAPGVHPPAPG-----------------VHPPAPGVHPPP 368
Query: 284 CCGQGAPGPGLASAAGCKRKYYPGQEEEEDD-EEDAGGLGAEPPGGAPFAP 333
G PG+ AA PG A G+ +PPG P AP
Sbjct: 369 SAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP 419
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/109 (28%), Positives = 38/109 (34%), Gaps = 9/109 (8%)
Query: 131 HPAPRGCAAAAAAGAPAGGAGALSELPG----CAALQPPHGAPHRGQP-LEPLQPGPAPL 185
HP G A P AG + PG A+ P H P + P PG P
Sbjct: 351 HPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQ 410
Query: 186 PLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPG 234
P + P AP P+ P + PG PP P P+ PG
Sbjct: 411 PPGVHPSAPGV----HPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPG 455
Score = 33.1 bits (74), Expect = 0.46
Identities = 34/131 (25%), Positives = 45/131 (34%), Gaps = 18/131 (13%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQP-LEPLQPGPAPLPLPLP 190
PAP A P G P + PP H P + P PG P +
Sbjct: 311 PAPGVHPPAPGVHPPTSGVH-----PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH 365
Query: 191 PPAPAALCPR-----------DPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFY-RG 238
PP A + P+ P+AP PG P A P S+PG + +
Sbjct: 366 PPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQP 425
Query: 239 AYPTPSDFGLH 249
PS+ G+H
Sbjct: 426 PGVHPSNPGVH 436
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 54.7 bits (130), Expect = 1e-07
Identities = 59/214 (27%), Positives = 72/214 (33%), Gaps = 60/214 (28%)
Query: 40 LRNARQLYLSER---------YAELYRRQQQQQQQQPPHHQHQHLAYAAPGMPASAADFG 90
L RQ L+ER YAEL RQQ +QQQ + Q H PG+
Sbjct: 928 LEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQHSGGPGL-------A 980
Query: 91 PLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGA 150
PL G H HQ L HQ P P P G
Sbjct: 981 PLGAAG---------------HPGMMPHQQPPPYPLMHHQMPPPH---------PPQPG- 1015
Query: 151 GALSELPGCAALQPPHGAPHRGQP-----LEPLQPGPAPLPLP----------LPPPAPA 195
++PG ++ P P R P + P GP P +P +P AP
Sbjct: 1016 ----QIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPN 1071
Query: 196 ALCPRDPRAPAACSAPPGAAPPAAAASPPASPAP 229
+ P P+ P PP A PPAS AP
Sbjct: 1072 GMYPPPPQQQPPPPPPADGVPPPPAPGPPASAAP 1105
>gi|48675811 immediate early response 2 [Homo sapiens]
Length = 223
Score = 54.7 bits (130), Expect = 1e-07
Identities = 25/55 (45%), Positives = 42/55 (76%)
Query: 1 MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAEL 55
ME +AQ ++++S+ K++ SR QRGG++LH++L +S V+R+AR+LYLS + L
Sbjct: 1 MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEAL 55
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 54.3 bits (129), Expect = 2e-07
Identities = 57/197 (28%), Positives = 72/197 (36%), Gaps = 24/197 (12%)
Query: 75 LAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAP 134
L A+PG P ++ P G RE QL QL Q+HQ +Q L H P P
Sbjct: 27 LPEASPG-PGYSSSTTPAAPSSSGFMSFREQHLA-QLQQLQQMHQKQMQCVLQPHHLPPP 84
Query: 135 RGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAP--------HRGQPLEPLQPGPAPL- 185
P GG G P + PP G ++ Q L + GP L
Sbjct: 85 ---PLPPPPVMPGGGYGDWQPPP--PPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLV 139
Query: 186 ------PLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAAS--PPASPAPASSPGFYR 237
P PP P + P PP PP ++ PPA P+P+ SP
Sbjct: 140 PMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQS 199
Query: 238 GAYPTPSDFGLHCSSQT 254
PTPS SSQ+
Sbjct: 200 YLAPTPSYSSSSSSSQS 216
Score = 42.0 bits (97), Expect = 0.001
Identities = 27/71 (38%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 174 PLEPLQPGPAPLPLPLPPPAPAALCPRD-PRAPAACSAPPGAAPPAAAASPPASPAPASS 232
P P P PLP PP P +L P P A A PPG PP S P S P
Sbjct: 519 PFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGM 578
Query: 233 PGFYRGAYPTP 243
P A P P
Sbjct: 579 PPSLSSAGPPP 589
Score = 37.0 bits (84), Expect = 0.032
Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 21/173 (12%)
Query: 42 NARQLYLSERYAELYRRQQQQQQQQPPHHQHQHLAYAAPGMPA---SAADFGPLQLGGGG 98
++ Q YLS + L Q + H + Q LA P P + PL+ G
Sbjct: 212 SSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKN 271
Query: 99 DAEAREPAA----------RHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAG 148
+ ++ AA + Q ++ H L LQQ+ H +G A P
Sbjct: 272 KSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVK 331
Query: 149 GAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRD 201
E+ A Q P +P +P PL P +P PLPP P + P +
Sbjct: 332 -----EEVTVPATSQVPE-SPSSEEP--PLPPPNEEVPPPLPPEEPQSEDPEE 376
Score = 36.6 bits (83), Expect = 0.042
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 26/109 (23%)
Query: 165 PHGAPHRGQPLEPLQPGPAP-LPLP----------LPPPAPAALCPRD--PRAPAACSAP 211
P P G P GP P LP P LPPP+ ++ P P P + + P
Sbjct: 570 PTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATP 629
Query: 212 PGAAPP-----------AAAASPPASPAPASS-PGFYRGA-YPTPSDFG 247
P PP AA PPAS + +S P R A PTP FG
Sbjct: 630 PPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFG 678
Score = 35.4 bits (80), Expect = 0.093
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 164 PPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSA-PPGAAPP---AA 219
PP P P P P +P P+ PP+ P P+ SA PP PP ++
Sbjct: 539 PPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSS 598
Query: 220 AASPPASPAPASS 232
A PP P P+ S
Sbjct: 599 AGPPPVLPPPSLS 611
Score = 35.0 bits (79), Expect = 0.12
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 154 SELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPG 213
S++P PP P P P+ P P +P PP P + P P P + PPG
Sbjct: 524 SQMPPPLPTMPPPVLPPSLPP--PVMPPALPATVP-PPGMPPPVMP--PSLPTSVP-PPG 577
Query: 214 AAPP-AAAASPPASPAPASSPGFYRGAYPTPS 244
P ++A PP P P+ S P PS
Sbjct: 578 MPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPS 609
Score = 35.0 bits (79), Expect = 0.12
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 157 PGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLP--PPAPAALCPRDPRAPAACSA--PP 212
P A PP G P P+ P P +P P PP+ ++ P P + S+ PP
Sbjct: 549 PALPATVPPPGMP------PPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPP 602
Query: 213 GAAPP---AAAASPPASPAPASSPGFYRGAYPTP 243
PP ++ A PP P P S P P
Sbjct: 603 PVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPP 636
Score = 32.3 bits (72), Expect = 0.78
Identities = 38/164 (23%), Positives = 53/164 (32%), Gaps = 40/164 (24%)
Query: 108 RHQLHQLHQLHQLHLQQQLHQHQHPAP---RGCAAAAAAGAPAGG---AGALSELPGCAA 161
R Q QL ++ + Q+ H P + ++ P G + + PG +
Sbjct: 1467 REQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPG--S 1524
Query: 162 LQPPHGAPHRG-----QPLEPLQPGPAPLPLPLPPPA--PAALCPRDPR----------- 203
+ P P R +P P+ P P P PLP PPP P R
Sbjct: 1525 IVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWD 1584
Query: 204 --------------APAACSAPPGAAPPAAAASPPASPAPASSP 233
A SAP PP ++ PP P P P
Sbjct: 1585 TNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGPVPMGMP 1628
Score = 29.6 bits (65), Expect = 5.1
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 154 SELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPG 213
S PG + PP G+ +P P+ P + P PPA +++ P P PP
Sbjct: 1500 SSRPG---MYPPPGSY---RPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPP 1553
Query: 214 AAPPAAAASPPASPAPA----SSPGFYRGAYPTPSDFGLH 249
PP P + A FY G + T + GL+
Sbjct: 1554 PLPPPPPVIKPQTSAVEQERWDEDSFY-GLWDTNDEQGLN 1592
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 53.5 bits (127), Expect = 3e-07
Identities = 32/81 (39%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 167 GAPHRGQPLE---PLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASP 223
GAP G +E P GP+P P P P P + PRD P PPG P AAA P
Sbjct: 882 GAPLAGPGVEARTPADRGPSPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPPPSPAAA-P 940
Query: 224 PASPAPASSPGFYRGAYPTPS 244
A P P + P + TPS
Sbjct: 941 EAVPPPPAPPSYSDKGVQTPS 961
Score = 38.5 bits (88), Expect = 0.011
Identities = 28/79 (35%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 166 HGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPA 225
H P R P PGPA P P P R A APP PP A P
Sbjct: 710 HDPPPRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPP--PPPPGHAPAPE 767
Query: 226 SPAPASSPGFYRGAYPTPS 244
SP P S G G P S
Sbjct: 768 SPRPGSGSGSGPGLAPARS 786
Score = 37.4 bits (85), Expect = 0.024
Identities = 33/103 (32%), Positives = 39/103 (37%), Gaps = 28/103 (27%)
Query: 144 GAPAGGAGALSELPG----------CAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPA 193
GAP G G + P A+ QP P G EP +P P PPP+
Sbjct: 882 GAPLAGPGVEARTPADRGPSPAPAPAASPQPGSRGPRDGLGPEPQEPPPG------PPPS 935
Query: 194 PAALCPRDPRAPAACSAPPGAAPPA---AAASPPASPAPASSP 233
PAA AP A PP APP+ P+ PA P
Sbjct: 936 PAA-------APEA--VPPPPAPPSYSDKGVQTPSKGTPAPLP 969
Score = 36.2 bits (82), Expect = 0.054
Identities = 48/168 (28%), Positives = 59/168 (35%), Gaps = 36/168 (21%)
Query: 190 PPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASSPGFYRGAYPTPSDFGLH 249
P APAA P+ P PA APPG PA +P +SP P + GA TP D
Sbjct: 606 PEDAPAARRPKAPPGPA--RAPPG--QPAEPDAPRSSPGPGAREEGAGGA-ATPEDGAGG 660
Query: 250 CSSQ------TTVLDLD----------------THVVTTVENGYLHQDCCASAH-----C 282
S+ ++V D + H TV Y CAS H
Sbjct: 661 RGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYY----CASRHDPPPRR 716
Query: 283 PCCGQGAPGPGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGAP 330
P G PGP A + + + AG PPG AP
Sbjct: 717 PAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAP 764
Score = 34.7 bits (78), Expect = 0.16
Identities = 38/127 (29%), Positives = 47/127 (37%), Gaps = 18/127 (14%)
Query: 107 ARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGA-------LSEL--P 157
+RH+ + +H+ + + + AP G AA AP+ A L EL
Sbjct: 693 SRHETYTVHKRYYCASRHDPPPRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAA 752
Query: 158 GCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRD----PRAPAACSAPPG 213
G PP AP P G P P P PAA P D PR P PG
Sbjct: 753 GAPPPPPPGHAPAPESPRPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPL-----PG 807
Query: 214 AAPPAAA 220
A PA A
Sbjct: 808 APAPALA 814
Score = 34.3 bits (77), Expect = 0.21
Identities = 59/259 (22%), Positives = 80/259 (30%), Gaps = 57/259 (22%)
Query: 115 HQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAP---HR 171
H+ + +H + P PR AA PA A P AP R
Sbjct: 695 HETYTVHKRYYCASRHDPPPRRPAAPPGPPGPA------------APPAPSPAAPVRTRR 742
Query: 172 GQPLEPLQPGPAPLPLPLPPPAPA-ALCPRDPRAPAACSAPPGAAP---PAAAASPPASP 227
+ L L AP PPP P A P PR + + PG AP P AA P
Sbjct: 743 RRKLYELHAAGAP-----PPPPPGHAPAPESPRPGSGSGSGPGLAPARSPGPAADGPIDL 797
Query: 228 APASSPGFYRGAYPTPSDFGLHCSSQTTVLDLDTHVV-------TTVENGYLHQDCCASA 280
+ P +D+ + + + L+ ++ G L A
Sbjct: 798 SKKPRRPLPGAPAPALADYHECTACRVSFHSLEAYLAHKKYSCPAAPPPGALGLPAAACP 857
Query: 281 HCPCCGQ-----------------GAP--GPGLASAAGCKRKYYPG-------QEEEEDD 314
+CP G GAP GPG+ + R P Q
Sbjct: 858 YCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGPSPAPAPAASPQPGSRGP 917
Query: 315 EEDAGGLGAEPPGGAPFAP 333
+ G EPP G P +P
Sbjct: 918 RDGLGPEPQEPPPGPPPSP 936
Score = 31.2 bits (69), Expect = 1.7
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 25/121 (20%)
Query: 128 QHQHPAPRGCAAAAAAG-APAGGAG----ALSELP-GCAALQP---------PHGAPHRG 172
Q QH A +G A+A G AP G AL+E G A +P P AP
Sbjct: 403 QQQHTALQGPLASADLGLAPTPSPGLDRKALAEATNGEARAEPLAQNGGSSEPPAAPRSI 462
Query: 173 QPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPASPAPASS 232
+ +P AP+ P P A PR+PA PA + +SP P SS
Sbjct: 463 KVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSPA----------PARVKAELSSPTPGSS 512
Query: 233 P 233
P
Sbjct: 513 P 513
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 53.1 bits (126), Expect = 4e-07
Identities = 41/116 (35%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP 191
P+PR A P G GAL P + P G R P +P +PGP L PL
Sbjct: 33 PSPRAAALPPLQQRPPGAPGALGR-PKPVSRGPRAGL--REWPQQPWRPGP--LGAPLQD 87
Query: 192 PAPAALCPRDPRAPAACSAPPGAA--PPAAAASPPASPAPASSPGFYRGAYPTPSD 245
AP+A P P A APP + PP S A P+P G +R P P D
Sbjct: 88 RAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVA-PSPGRPAGLHRSREPRPQD 142
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 53.1 bits (126), Expect = 4e-07
Identities = 41/116 (35%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP 191
P+PR A P G GAL P + P G R P +P +PGP L PL
Sbjct: 33 PSPRAAALPPLQQRPPGAPGALGR-PKPVSRGPRAGL--REWPQQPWRPGP--LGAPLQD 87
Query: 192 PAPAALCPRDPRAPAACSAPPGAA--PPAAAASPPASPAPASSPGFYRGAYPTPSD 245
AP+A P P A APP + PP S A P+P G +R P P D
Sbjct: 88 RAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVA-PSPGRPAGLHRSREPRPQD 142
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 53.1 bits (126), Expect = 4e-07
Identities = 41/116 (35%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 132 PAPRGCAAAAAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPP 191
P+PR A P G GAL P + P G R P +P +PGP L PL
Sbjct: 33 PSPRAAALPPLQQRPPGAPGALGR-PKPVSRGPRAGL--REWPQQPWRPGP--LGAPLQD 87
Query: 192 PAPAALCPRDPRAPAACSAPPGAA--PPAAAASPPASPAPASSPGFYRGAYPTPSD 245
AP+A P P A APP + PP S A P+P G +R P P D
Sbjct: 88 RAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVA-PSPGRPAGLHRSREPRPQD 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,134,157
Number of Sequences: 37866
Number of extensions: 1675606
Number of successful extensions: 43149
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 1855
Number of HSP's that attempted gapping in prelim test: 15979
Number of HSP's gapped (non-prelim): 15440
length of query: 404
length of database: 18,247,518
effective HSP length: 105
effective length of query: 299
effective length of database: 14,271,588
effective search space: 4267204812
effective search space used: 4267204812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.