SMARCC1 10242

Name: SMARCC1	Sequence: fasta or formatted (1105aa)		NCBI GI: 188536047
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c1		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 94 5 C cysteine 0.8 9 1 D aspartate 5.6 62 2 E glutamate 9.5 105 3 F phenylalanine 2.4 26 2 G glycine 6.3 70 4 H histidine 3.0 33 2 I isoleucine 3.1 34 3 K lysine 7.3 81 3 L leucine 7.0 77 4 M methionine 2.8 31 2 N asparagine 4.3 47 2 P proline 9.8 108 6 Q glutamine 5.2 58 3 R arginine 4.6 51 2 S serine 5.5 61 3 T threonine 4.9 54 1 V valine 5.8 64 2 W tryptophan 1.2 13 1 Y tyrosine 2.4 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent r... SMARCC2 0.591 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.584 SWI/SNF-related matrix-associated actin-dependent r... SMARCC2 0.584 SWI/SNF-related matrix-associated actin-dependent re... DIAPH1 0.025 diaphanous 1 isoform 2 DIAPH1 0.025 diaphanous 1 isoform 1 SFPQ 0.024 splicing factor proline/glutamine rich (polypyrimidin... CPSF6 0.024 cleavage and polyadenylation specific factor 6, 68 ... WBP11 0.023 WW domain binding protein 11 FMNL1 0.022 formin-like 1 WASF2 0.022 WAS protein family, member 2 FMN2 0.021 formin 2 SF3A2 0.021 splicing factor 3a, subunit 2 YLPM1 0.021 YLP motif containing 1 SF1 0.020 splicing factor 1 isoform 3 SF1 0.020 splicing factor 1 isoform 2 SF1 0.020 splicing factor 1 isoform 1 SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent re... SAMD1 0.020 sterile alpha motif domain containing 1 CCNK 0.019 cyclin K isoform 1 PRR12 0.019 proline rich 12 ENAH 0.019 enabled homolog isoform a ENAH 0.019 enabled homolog isoform b WASL 0.019 Wiskott-Aldrich syndrome gene-like protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.