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Search of human proteins with 148664244
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo
sapiens]
(682 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo s... 1344 0.0
gi|148664201 cytoskeleton associated protein 2 isoform 2 [Homo s... 1339 0.0
gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens] 148 2e-35
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 44 6e-04
gi|87299628 biorientation of chromosomes in cell division 1-like... 43 0.001
gi|37595553 ring finger protein 111 [Homo sapiens] 42 0.002
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 42 0.002
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 41 0.004
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 41 0.004
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 40 0.005
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 40 0.005
gi|83367077 mucin 16 [Homo sapiens] 40 0.005
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 40 0.007
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 40 0.007
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 40 0.009
gi|24431975 hypothetical protein LOC26148 [Homo sapiens] 40 0.009
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 39 0.012
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 39 0.012
gi|45269141 multimerin 1 [Homo sapiens] 39 0.016
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.016
gi|30795204 histone deacetylase 9 isoform 5 [Homo sapiens] 38 0.027
gi|18379328 WW domain-containing adapter with a coiled-coil regi... 38 0.035
gi|18379332 WW domain-containing adapter with a coiled-coil regi... 38 0.035
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 38 0.035
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 37 0.060
gi|11225260 DNA topoisomerase I [Homo sapiens] 37 0.079
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 37 0.079
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 37 0.079
gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens] 37 0.079
gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens] 37 0.079
>gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo
sapiens]
Length = 682
Score = 1344 bits (3478), Expect = 0.0
Identities = 682/682 (100%), Positives = 682/682 (100%)
Query: 1 MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTS 60
MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTS
Sbjct: 1 MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTS 60
Query: 61 EDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKP 120
EDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKP
Sbjct: 61 EDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKP 120
Query: 121 KDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRG 180
KDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRG
Sbjct: 121 KDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRG 180
Query: 181 QIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTK 240
QIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTK
Sbjct: 181 QIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTK 240
Query: 241 FVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVK 300
FVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVK
Sbjct: 241 FVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVK 300
Query: 301 TSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPK 360
TSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPK
Sbjct: 301 TSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPK 360
Query: 361 ETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFTE 420
ETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFTE
Sbjct: 361 ETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFTE 420
Query: 421 KVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENII 480
KVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENII
Sbjct: 421 KVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENII 480
Query: 481 AIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGVD 540
AIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGVD
Sbjct: 481 AIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGVD 540
Query: 541 VDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYLQ 600
VDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYLQ
Sbjct: 541 VDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYLQ 600
Query: 601 SVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCVSSLEQLTELGRE 660
SVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCVSSLEQLTELGRE
Sbjct: 601 SVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCVSSLEQLTELGRE 660
Query: 661 TDAFVCRPNAALCRVYYEADTT 682
TDAFVCRPNAALCRVYYEADTT
Sbjct: 661 TDAFVCRPNAALCRVYYEADTT 682
>gi|148664201 cytoskeleton associated protein 2 isoform 2 [Homo
sapiens]
Length = 683
Score = 1339 bits (3466), Expect = 0.0
Identities = 682/683 (99%), Positives = 682/683 (99%), Gaps = 1/683 (0%)
Query: 1 MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSS-RDQRVVT 59
MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSS RDQRVVT
Sbjct: 1 MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSSRDQRVVT 60
Query: 60 SEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHK 119
SEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHK
Sbjct: 61 SEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHK 120
Query: 120 PKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYR 179
PKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYR
Sbjct: 121 PKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYR 180
Query: 180 GQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATT 239
GQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATT
Sbjct: 181 GQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATT 240
Query: 240 KFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSV 299
KFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSV
Sbjct: 241 KFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSV 300
Query: 300 KTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQP 359
KTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQP
Sbjct: 301 KTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQP 360
Query: 360 KETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFT 419
KETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFT
Sbjct: 361 KETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFT 420
Query: 420 EKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENI 479
EKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENI
Sbjct: 421 EKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENI 480
Query: 480 IAIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGV 539
IAIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGV
Sbjct: 481 IAIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGV 540
Query: 540 DVDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYL 599
DVDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYL
Sbjct: 541 DVDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYL 600
Query: 600 QSVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCVSSLEQLTELGR 659
QSVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCVSSLEQLTELGR
Sbjct: 601 QSVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCVSSLEQLTELGR 660
Query: 660 ETDAFVCRPNAALCRVYYEADTT 682
ETDAFVCRPNAALCRVYYEADTT
Sbjct: 661 ETDAFVCRPNAALCRVYYEADTT 683
>gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]
Length = 745
Score = 148 bits (373), Expect = 2e-35
Identities = 130/504 (25%), Positives = 226/504 (44%), Gaps = 72/504 (14%)
Query: 185 SKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVST 244
SK+ S +KP+ VK+ + P TK + + VK + +
Sbjct: 287 SKVQSSKKPV-VKNIKDIKVNRSQYERPNETKIRSYPVTEQRVKHTKPRTYPS------- 338
Query: 245 TSQNTQLVRPPIRSHHSNTRDTVKQG---ISRTSANVTIRKGPHEKELL---QSKTALSS 298
L++ + H N + K I +TS + K ++ L + +A+ S
Sbjct: 339 ------LLQGEYNNRHPNIKQDQKSSQVCIPQTSCVLQKSKAISQRPNLTVGRFNSAIPS 392
Query: 299 VKTSSSQGIIRNKTLSRSIASEVIARPASLSN----DKLMEKSEPVDQRRHTAGKAIVDS 354
+ G NK + + + L + + K+ P Q T +
Sbjct: 393 TPSIRPNGTSGNKHNNNGFQQKAQTLDSKLKKAVPQNHFLNKTAPKTQADVTTVNGTQTN 452
Query: 355 RSAQPKETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDE 414
+ + K T+E+R+ +L EW+ KG+ KRPP + T+ + + SFW ++ +E+E
Sbjct: 453 PNIKKKATAEDRRKQLEEWQKSKGKTYKRPPMELKTKRKVIKEMNI---SFWKSIEKEEE 509
Query: 415 QRL----FTEKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIE 470
++ + K+NNT +ECLNLI G P +IL +++ +IP+A+K K+WIC A +
Sbjct: 510 EKKAQLELSSKINNTLTECLNLIEGGVPSNEIL----NILSSIPEAEKFAKFWICKAKLL 565
Query: 471 PITSPIENIIAIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGENMEKSCASKEEVK 530
+ +I +YE+AI GA PI+E+R +++IL ++ + S V
Sbjct: 566 ASKGTFD-VIGLYEEAIKNGATPIQELRKVVLNILQDSNRTTEGI--------TSDSLVA 616
Query: 531 EVSIEDTGVDVDPEKLEMESKLHRNLLFQDC--EKEQDNKTKDPTHDVKTPNTETRTSCL 588
E SI T V+ +K+E + C KE++ T P + E
Sbjct: 617 ETSI--TSVEELAKKMES---------VKSCLSPKEREQVTATP----RIAKAEQHNYPG 661
Query: 589 IKYNVSTTPYLQSVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTSKLPDMLKDHYPCV 648
IK + P + + + +++KF+TPVRRS R++ S+ P+ML++H V
Sbjct: 662 IKLQIGPIPRINGMPE----------VQDMKFITPVRRSSRIERAVSRYPEMLQEHDLVV 711
Query: 649 SSLEQLTELGRETDAFVCRPNAAL 672
+SL++L E+ ET F+ R N AL
Sbjct: 712 ASLDELLEV-EETKCFIFRRNEAL 734
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 43.5 bits (101), Expect = 6e-04
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 59 TSEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTH 118
T E Q Q KV + E+ R +ESK K+ KPS+ +S
Sbjct: 749 TREAQKQASEKVSNKGKRKHKNEDDNRASESKKPKTEDKNSAGHKPSSNRESSKQ--SAA 806
Query: 119 KPKDSNQTPHLLLTEDDPQSQH----MTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPV 174
K KD +P + DP+++H T+SQ+ LK++S + T+ K ++ K+
Sbjct: 807 KEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKSSSNSNKETSGSSKNSSSTSKQ-- 864
Query: 175 LGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQ 218
+ + K +S K ++ K SS++ SA ++KP+
Sbjct: 865 ------KKTEGKTSSSSKEVKEKAPSSSSNCPPSAPTLDSSKPR 902
Score = 31.6 bits (70), Expect = 2.5
Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 27/252 (10%)
Query: 12 LPPSQRAQSAFKEQRRQKLK------EHLLRRKTLFAYKQENEMLSSRDQRVVTSEDQVQ 65
LPPS + + E R +K E R+ +F+ +E E+LS + +D+
Sbjct: 659 LPPSSQTPK-YPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSE----PDDRYP 713
Query: 66 EGTKV-LKLKTKMADKENMK-RPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDS 123
K+ L L T++ K + P + + V KH + S HK +D
Sbjct: 714 LIVKIDLNLLTRIPGKPYKETEPPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKNEDD 773
Query: 124 NQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIV 183
N+ P+++ KN++ K + + + + +K +L S G V
Sbjct: 774 NRASE----SKKPKTED---------KNSAGHKPSSNRESSKQSAAKEKDLLPSPAGP-V 819
Query: 184 QSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVS 243
SK + + S +++ K S+ K T N+SS + + ++++K V
Sbjct: 820 PSKDPKTEHGSRKRTISQSSSLKSSSNSNKETSGSSKNSSSTSKQKKTEGKTSSSSKEVK 879
Query: 244 TTSQNTQLVRPP 255
+ ++ PP
Sbjct: 880 EKAPSSSSNCPP 891
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 42.7 bits (99), Expect = 0.001
Identities = 81/422 (19%), Positives = 155/422 (36%), Gaps = 68/422 (16%)
Query: 24 EQRRQKLKEHLLRRKTL---FAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKLKTKMADK 80
E + ++KE L RK L A ++ + S + + Q +E +K ++ +K
Sbjct: 550 EPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSEHCEK 609
Query: 81 ENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLLLTE------- 133
E + E K+ V P KP+ L+ S V+D +K + + H T
Sbjct: 610 EKISSSKELKH---VHAKSEPSKPARRLSESLHVVDENKNESKLEREHKRRTSTPVIMEG 666
Query: 134 ---------------------DDPQSQHMTLSQAFHLKNNSK---------KKQMTTEKQ 163
++PQ Q TL HLK + KK++ + K+
Sbjct: 667 VQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKE 726
Query: 164 KQD----ANMPKKPVLGSYRGQIV-----QSKINSFRKPLQVKD--ESSAATKKLSATIP 212
K + + K V Y+G + +++++S K L+V++ + + KLS+
Sbjct: 727 KPEREKTPSEDKLSVKHKYKGDCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLSSDDK 786
Query: 213 KATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGIS 272
K + N ++V ++++ T +N + + + T + S
Sbjct: 787 TERKSKHRNERKLSVLGKDGK---PVSEYIIKTDENVRKENNK-KERRLSAEKTKAEHKS 842
Query: 273 RTSANVTIRKG-----PHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPAS 327
R S++ I+K H L + + S K + + + + R S
Sbjct: 843 RRSSDSKIQKDSLGSKQHGITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKS 902
Query: 328 LSNDKLMEKSEPVDQRR-----HTAGKAIVDSRSAQPKETSEERKARLSEWKAGKGRVLK 382
L +KL+ KS+ Q + T + ++ PK E+ K K +V
Sbjct: 903 LLEEKLVLKSKSKTQGKQVKVVETELQEGATKQATTPKPDKEKNTEENDSEKQRKSKVED 962
Query: 383 RP 384
+P
Sbjct: 963 KP 964
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 42.0 bits (97), Expect = 0.002
Identities = 54/301 (17%), Positives = 111/301 (36%), Gaps = 23/301 (7%)
Query: 11 QLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTSEDQVQEG--- 67
+LP +R QR QK KE +L ++ ++ E+L+ R ++ S E
Sbjct: 209 RLPCRKRFVKNNSSQRTQKQKERILMQR------KKREVLARRKYALLPSSSSSSENDLS 262
Query: 68 TKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTP 127
++ + +++ +E+ N P PS + VVI+
Sbjct: 263 SESSSSSSTEGEEDLFVSASENHQNN-------PAVPSGSIDEDVVVIEASSTPQVTANE 315
Query: 128 HLLLTEDDPQSQHMTLSQAFHLKNN-SKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSK 186
+ +T D + + +T+ +++ ++ + ++ A+ P++P S ++Q
Sbjct: 316 EINVTSTDSEVEIVTVGESYRSRSTLGHSRSHWSQGSSSHASRPQEPRNRSRISTVIQPL 375
Query: 187 INSFRK--PLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVST 244
+ + L V ++ SA + +N S+ + S +A T +
Sbjct: 376 RQNAAEVVDLTVDEDEPTVVPTTSARMESQATSASINNSNPSTSEQASDTASAVTSSQPS 435
Query: 245 TSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTSSS 304
T T + +S T ++ RT+++ GP L S S SS
Sbjct: 436 TVSETSAT----LTSNSTTGTSIGDDSRRTTSSAVTETGPPAMPRLPSCCPQHSPCGGSS 491
Query: 305 Q 305
Q
Sbjct: 492 Q 492
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 41.6 bits (96), Expect = 0.002
Identities = 67/303 (22%), Positives = 111/303 (36%), Gaps = 34/303 (11%)
Query: 93 TVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNN 152
T GKH + + P +++ T SNQ P + + +S +
Sbjct: 627 TFGGKHLVHILPRPSSLSASNSTQTFSVTMSNQQPQTISLNGQLFALQPVMSSSGTTNQT 686
Query: 153 SKKKQMTTEKQKQDANMPKKP--VLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSAT 210
+ T + + N+ L S I Q S + L + +++ T S T
Sbjct: 687 PMQIIQPTTSEDPNTNVALNTFGALASLNQSISQMAGQSCVQ-LSISQPANSQTAANSQT 745
Query: 211 IPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSN-------- 262
A T++ V ++ S+ + +T VST+S NT P ++S N
Sbjct: 746 TT-ANCVSLTTTAAPPVTTDSSATLASTYNLVSTSSMNTVACLPNMKSKRLNKKPGGRKH 804
Query: 263 ------------TRDTVKQGISRTSANVTIRKGPHEKELLQSKTA-LSSVKTSSSQGIIR 309
RD K T + + P LL+S A L SV S + +
Sbjct: 805 LAANKSACPLNSVRDVSKLDCPNTEGSA---EPPCNDGLLESFPAVLPSVSVSQANSVSV 861
Query: 310 NKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTA---GKAIVDSRSAQP---KETS 363
+ + S + S P S+S K EKS P Q T+ A S+ + P +ETS
Sbjct: 862 SASHSLGVLSSESLIPESVSKSKSAEKSSPPSQESVTSEHFAMAAAKSKDSTPNLQQETS 921
Query: 364 EER 366
+++
Sbjct: 922 QDK 924
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 40.8 bits (94), Expect = 0.004
Identities = 109/579 (18%), Positives = 233/579 (40%), Gaps = 68/579 (11%)
Query: 8 QDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEM-----LSSRDQRVVTSED 62
Q QL + QS +Q ++ L + + +K Q+ + ++ + ++ S++
Sbjct: 576 QVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESKE 635
Query: 63 QVQEGTKVLKLKTKM---ADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHK 119
+V + +K KT++ A+ + A+ +N+ ++ + K EL T +D
Sbjct: 636 KVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDK-QQELNKITTQLDQVT 694
Query: 120 PKDSNQTPHLLLTED---DPQSQHMTLSQ-------------AFHLKNNSKKKQMTTEKQ 163
K ++ H E + + ++++L Q A L+ + K+Q + Q
Sbjct: 695 AKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEADSLEVKASKEQALQDLQ 754
Query: 164 KQ---DANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDES--SAATKKLSATIPKATKPQ 218
+Q + ++ + S + ++ + ++S R LQ K E+ S K K Q
Sbjct: 755 QQRQLNTDLELRATELSKQLEMEKEIVSSTRLDLQKKSEALESIKQKLTKQEEEKQILKQ 814
Query: 219 PVNTSSVTVKSNRS--SNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSA 276
T S K +N TT T Q ++ + + + S TVK +S+ S
Sbjct: 815 DFETLSQETKIQHEELNNRIQTTV---TELQKVKMEKEALMTELS----TVKDKLSKVSD 867
Query: 277 NVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEK 336
++ K EKE + K A+ ++ + + + + + E SL +K E
Sbjct: 868 SLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKELKKSLEKEK--EA 925
Query: 337 SEPVDQRRHTAGKAIVDSRSAQPKETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAG 396
S + ++ + ++ +++ + EE++ + G LK+ Q E A
Sbjct: 926 SHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQ------GNINELKQSSEQKKKQIE-AL 978
Query: 397 QNEKPVGSFWTTMAEEDEQRLFTEKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDA 456
Q E + T E Q+ T+ +E KE I V N+ K+
Sbjct: 979 QGELKIAVLQKTELENKLQQQLTQAAQELAAE----------KEKISVLQNNYEKSQETF 1028
Query: 457 KKLVKYWI-----CLALIEPITSPIENIIAIYEKAILAGAQPIEEMRHTIVDILTMKS-- 509
K+L + LA + + S +E +++ ++ +++ I I ++ T K+
Sbjct: 1029 KQLQSDFYGRESELLATRQDLKS-VEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATL 1087
Query: 510 -QEKANLGENMEKSCASKEEV-KEVSIEDTGVDVDPEKL 546
Q+ A + +++ C + +++ KE S+++ + + KL
Sbjct: 1088 EQDSAKKEQQLQERCKALQDIQKEKSLKEKELVNEKSKL 1126
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 40.8 bits (94), Expect = 0.004
Identities = 76/393 (19%), Positives = 158/393 (40%), Gaps = 45/393 (11%)
Query: 14 PSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKL 73
P + ++ + + +LK+ + +L ++E ++ R +D ++ + L
Sbjct: 2413 PVEESKGSLIDFSEDRLKKEMQNPTSLKISEEETKL---RSVSPTEKKDNLENRSYTLAE 2469
Query: 74 KTKMADKENMKRPAESKNNTVVGKHCIPL-KPSNELTNS---TVVIDTHKPKDSNQTPHL 129
K +A+K+N P E +++ +GK I L S EL S + ++ +D N+ P +
Sbjct: 2470 KKVLAEKQNSVAPLELRDSNEIGKTQITLGSRSTELKESKADAMPQHFYQNEDYNERPKI 2529
Query: 130 LLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSKINS 189
++ + + + +Q + L K+++ +M ++ + S + +++ S
Sbjct: 2530 IVGSEKEKGEEKE-NQVYVLSEGKKQQEHQPYSVNVAESMSRESDI-SLGHSLGETQSFS 2587
Query: 190 FRKPLQVKDESSAATKKLSATIPKA----TKPQPVNTSSVTVKSNRSSNMTATT-----K 240
K V ++S A + I +A T+P P+ S V V+ ++ A + +
Sbjct: 2588 LVKATSVTEKSEAMLAEAHPEIREAKAVGTQPHPLEESKVLVEKTKTFLPVALSCRDEIE 2647
Query: 241 FVSTTSQNTQLVRPPIRS--HHSN------------------TRDTVKQGISRTSANVTI 280
S + + ++ R HS T++TVKQG +
Sbjct: 2648 NHSLSQEGNLVLEKSSRDMPDHSEEKEQFRESELSKGGSVDITKETVKQGFQEKAVGTQP 2707
Query: 281 RKGPHEKELLQ-SKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEP 339
R K L++ +KT L V + + I N +LS+ + V+ + + D EK +
Sbjct: 2708 RPLEESKVLVEKTKTFLPVVLSCHDE--IENHSLSQE-GNLVLEKSSRDMPDHSEEKEQF 2764
Query: 340 VDQRRHTAGKAIVDSRSAQ---PKETSEERKAR 369
+ G + S + P + SE AR
Sbjct: 2765 KESELWKGGSVDITKESMKEGFPSKESERTLAR 2797
Score = 33.9 bits (76), Expect = 0.51
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 10/183 (5%)
Query: 36 RRKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVV 95
++ LF+ ++E L S ++ + S +V E L L K+ S+N +
Sbjct: 1494 KQDLLFSTVCDSERLVSSQKKSLMSTSEVLEPEHELPLSLWGEIKKKETELPSSQNVSPA 1553
Query: 96 GKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKK 155
KH IP E +S+ ++ S P LLL DD + +S S+K
Sbjct: 1554 SKHIIPKGKDEETASSSPELEN---LASGLAPTLLLLSDDKNKPAVEVSSTAQGDFPSEK 1610
Query: 156 K-----QMTTEKQKQDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSAT 210
+ +++ E +K+D P +P+ G S + + K S T+ +
Sbjct: 1611 QDVALAELSLEPEKKD--KPHQPLELPNAGSEFSSDLGRQSGSIGTKQAKSPITETEDSV 1668
Query: 211 IPK 213
+ K
Sbjct: 1669 LEK 1671
Score = 32.7 bits (73), Expect = 1.1
Identities = 55/287 (19%), Positives = 101/287 (35%), Gaps = 22/287 (7%)
Query: 8 QDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTSEDQVQEG 67
+DL LPPS + + + + A KQ+ + + + E
Sbjct: 1076 EDLSLPPSTDKSEKAEIKPEIPTTSTSVSEYLILAQKQKTQAYLEPESEDLIPSHLTSEV 1135
Query: 68 TKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTP 127
K + + PA+S ++V + P P + L +S I K+ T
Sbjct: 1136 EKGEREASSSVAAIPAALPAQS---SIVKEETKPASPHSVLPDSVPAIK----KEQEPTA 1188
Query: 128 HLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQK---QDANMPKKPVLGSYRGQIVQ 184
L L D Q + + + ++ + ++ QK Q N+P+ + S +V
Sbjct: 1189 ALTLKAADEQMALSKVRKEEIVPDSQEATAHVSQDQKMEPQPPNVPESEMKYSVLPDMVD 1248
Query: 185 SKINSFRKPLQVKDESSAATKKLSATIPKATKPQ----------PVNTSSVTVKSNRSSN 234
+ L + S +KLS P+ KP P S+V ++ S
Sbjct: 1249 EPKKGVKPKLVLNVTSELEQRKLSKNEPEVIKPYSPLKETSLSGPEALSAVKMEMKHDSK 1308
Query: 235 MTATTKFVSTTSQNT--QLVRPPIRSHHSNTRDTVKQGISRTSANVT 279
+T T + + S Q+ P S + +K+ I +S+ T
Sbjct: 1309 ITTTPIVLHSASSGVEKQVEHGPPALAFSALSEEIKKEIEPSSSTTT 1355
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 40.4 bits (93), Expect = 0.005
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 10/206 (4%)
Query: 165 QDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSA-TIPKATKPQPVNTS 223
Q++ +P G+ V++ NS R+ + ES++A S +A P
Sbjct: 150 QNSENENEPSARRSSGENVEN--NSQRQVENPRSESTSARPSRSERNSTEALTEVPPTRG 207
Query: 224 SVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVK-------QGISRTSA 276
+S + + + S + P RSHHS + T + +G SRT
Sbjct: 208 QRRARSRSPDHRRTRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRH 267
Query: 277 NVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEK 336
+VT+R+ ELL +S ++SQG + T + ++ RP ++ D + +
Sbjct: 268 HVTLRQQISGPELLSRGLFAASGTRNASQGAGSSDTAASGESTGSGQRPPTIVLDLQVRR 327
Query: 337 SEPVDQRRHTAGKAIVDSRSAQPKET 362
P + R+ + + SRS P T
Sbjct: 328 VRPGEYRQRDSIASRTRSRSQTPNNT 353
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 40.4 bits (93), Expect = 0.005
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 10/206 (4%)
Query: 165 QDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSA-TIPKATKPQPVNTS 223
Q++ +P G+ V++ NS R+ + ES++A S +A P
Sbjct: 150 QNSENENEPSARRSSGENVEN--NSQRQVENPRSESTSARPSRSERNSTEALTEVPPTRG 207
Query: 224 SVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVK-------QGISRTSA 276
+S + + + S + P RSHHS + T + +G SRT
Sbjct: 208 QRRARSRSPDHRRTRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRH 267
Query: 277 NVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEK 336
+VT+R+ ELL +S ++SQG + T + ++ RP ++ D + +
Sbjct: 268 HVTLRQQISGPELLSRGLFAASGTRNASQGAGSSDTAASGESTGSGQRPPTIVLDLQVRR 327
Query: 337 SEPVDQRRHTAGKAIVDSRSAQPKET 362
P + R+ + + SRS P T
Sbjct: 328 VRPGEYRQRDSIASRTRSRSQTPNNT 353
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 40.4 bits (93), Expect = 0.005
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 181 QIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTK 240
+I + + S P Q +T+ +S +T P ++ +T+ ++ +S + ATT+
Sbjct: 7862 EISKEDVTSIPGPAQSTISPDISTRTVSWF---STSPVMTESAEITMNTH-TSPLGATTQ 7917
Query: 241 FVST--TSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHE---------KEL 289
ST TS T L T T+ QG S + + +R+GP + ++
Sbjct: 7918 GTSTLDTSSTTSLTM---------THSTISQGFSHSQMSTLMRRGPEDVSWMSPPLLEKT 7968
Query: 290 LQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSN------DKLMEKSEPVDQR 343
S + +SS T+S + + TL SI+S + + L++ D L + SEPV
Sbjct: 7969 RPSFSLMSSPATTSPSPV--SSTLPESISSSPLPVTSLLTSGLAKTTDMLHKSSEPV--- 8023
Query: 344 RHTAGKAIVDSRSAQPKETSE 364
T A + S S + TSE
Sbjct: 8024 --TNSPANLSSTSVEILATSE 8042
Score = 37.0 bits (84), Expect = 0.060
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 20/183 (10%)
Query: 217 PQPVNTSSVTVKSNRSSNMT---ATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISR 273
P V SVT K+ S +T T +++T + R +S S T ++ IS
Sbjct: 9238 PSSVLADSVTTKATSSMGITYPTGDTNVLTSTPAFSDTSRIQTKSKLSLTPGLMETSISE 9297
Query: 274 TSANVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKL 333
+++ T + T LSSV T ++ + R + +S S S +++S+D
Sbjct: 9298 ETSSAT-----------EKSTVLSSVPTGATTEVSRTEAISSSRTSIPGPAQSTMSSDTS 9346
Query: 334 MEK----SEPVDQRRHT--AGKAIVDSRSAQPKETSEERKARLSEWKAGKGRVLKRPPNS 387
ME S P+ ++ T A A + T + + W +R P S
Sbjct: 9347 METITRISTPLTRKESTDMAITPKTGPSGATSQGTFTLDSSSTASWPGTHSATTQRFPQS 9406
Query: 388 VVT 390
VVT
Sbjct: 9407 VVT 9409
Score = 33.1 bits (74), Expect = 0.87
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 126 TPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKK--PVLGSYRGQIV 183
+P L ++ + H T + N+ + T +++ M P LG +
Sbjct: 408 SPSTTLVSEETNTHHSTSGKETEGTLNTSMTPLETSAPGEESEMTATLVPTLGF---TTL 464
Query: 184 QSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVS 243
SKI R P QV SS T++L T + + Q +T++ + ++T+K S
Sbjct: 465 DSKI---RSPSQVS--SSHPTRELRTTGSTSGR-QSSSTAAHGSSDILRATTSSTSKASS 518
Query: 244 TTSQNT-QLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTS 302
TS++T Q P + T ++K S +V P + + +++KTS
Sbjct: 519 WTSESTAQQFSEPQHTQWVETSPSMKTERPPASTSVA---APITTSVPSVVSGFTTLKTS 575
Query: 303 SSQGIIRNKTLSRSIASEVIARPAS 327
S++GI +T + ++ E A P +
Sbjct: 576 STKGIWLEETSADTLIGESTAGPTT 600
Score = 32.3 bits (72), Expect = 1.5
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 18/178 (10%)
Query: 198 DESSAATKKLSA---TIPK---ATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQL 251
+E+S+ + +S+ T P +T PQ + +S + V + +S + TT + TTS +
Sbjct: 5330 EETSSVSSLMSSPAMTSPSPVSSTSPQSIPSSPLPVTALPTSVLVTTTDVLGTTSPESVT 5389
Query: 252 VRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNK 311
PP S ++ R + + T A + H + TA+++V TS S ++
Sbjct: 5390 SSPPNLSSITHERPATYKDTAHTEAAM------HH----STNTAVTNVGTSGSGHKSQSS 5439
Query: 312 TLSRSIASEV--IARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPKETSEERK 367
L+ S S+ + S D + S P + + S S + +E+S K
Sbjct: 5440 VLADSETSKATPLMSTTSTLGDTSVSTSTPNISQTNQIQTEPTASLSPRLRESSTSEK 5497
Score = 32.3 bits (72), Expect = 1.5
Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 31/196 (15%)
Query: 123 SNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQI 182
S TP++ T +LS + S+K TTE + +P + + R +I
Sbjct: 5465 STSTPNISQTNQIQTEPTASLSPRLRESSTSEKTSSTTETNTAFSYVPTGAITQASRTEI 5524
Query: 183 VQSK--INSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTK 240
S+ I+ +P D S+ +L + P+ T +S+ MT TT+
Sbjct: 5525 SSSRTSISDLDRPTIAPDISTGMITRLFTS--------PIMT--------KSAEMTVTTQ 5568
Query: 241 FVSTTSQNTQLVRPPIRS---HHSNTRDTVKQGI---------SRTSANVTIRKGPHEKE 288
+T +Q + P S T TV QG SRT +V+ P +E
Sbjct: 5569 -TTTPGATSQGILPWDTSTTLFQGGTHSTVSQGFPHSEITTLRSRTPGDVSWMTTPPVEE 5627
Query: 289 LLQSKTALSSVKTSSS 304
+ +S TS S
Sbjct: 5628 TSSGFSLMSPSMTSPS 5643
Score = 31.6 bits (70), Expect = 2.5
Identities = 58/284 (20%), Positives = 108/284 (38%), Gaps = 36/284 (12%)
Query: 50 LSSRDQRVVTSEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELT 109
L S ++ T+ + +++ K+ T +A +E ++ + V + P K ++ +
Sbjct: 6566 LGSTSHKIPTTSEDIKDTEKMYP-STNIAVTNVGTTTSEKESYSSVPAYSEPPKVTSPMV 6624
Query: 110 NS----TVVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQ--MTTEKQ 163
S ++ T P S +T + +S T S A LK S + ++TEK
Sbjct: 6625 TSFNIRDTIVSTSMPGSSE------ITRIEMES---TFSLAHGLKGTSTSQDPIVSTEKS 6675
Query: 164 KQDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTS 223
+ S R ++ S+ S P D S+ + + IP
Sbjct: 6676 AVLHKLTTGATETS-RTEVASSRRTSIPGP----DHSTESPDISTEVIPSLP-------- 6722
Query: 224 SVTVKSNRSSNMTATTKF---VSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTI 280
+++ SSNMT T+ + +TSQ T + P S + T Q + +
Sbjct: 6723 -ISLGITESSNMTIITRTGPPLGSTSQGTFTLDTPTTSSRAGTHSMATQEFPHSEMTTVM 6781
Query: 281 RKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIAR 324
K P E+L S KTS S ++ + ++ S + +
Sbjct: 6782 NKDP---EILSWTIPPSIEKTSFSSSLMPSPAMTSPPVSSTLPK 6822
Score = 31.2 bits (69), Expect = 3.3
Identities = 69/329 (20%), Positives = 125/329 (37%), Gaps = 38/329 (11%)
Query: 47 NEMLSSRDQRVVTSEDQVQEGTKVLKLKTKMADKE-NMKRPAESKNNTVVGKHCIPLKPS 105
+E L++ T V E T ++T A +E P S+ V+ P+ S
Sbjct: 9497 DESLAASKATTETEAIHVFENTAASHVETTSATEELYSSSPGFSEPTKVIS----PVVTS 9552
Query: 106 NELTNSTVVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQ 165
+ + ++ ++ T P S +T + +S +L+ S+ +TE
Sbjct: 9553 SSIRDN--MVSTTMPGSSG------ITRIEIESMS-SLTPGLRETRTSQDITSSTETSTV 9603
Query: 166 DANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSV 225
MP R +++ S S P Q S + +S + P+ T S
Sbjct: 9604 LYKMPSGATPEVSRTEVMPSSRTSIPGPAQ-----STMSLDISDEVVTRLSTSPIMTESA 9658
Query: 226 TVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPH 285
+ +T T + TSQ T L + S T T+ QG+S + + +GP
Sbjct: 9659 EI------TITTQTGYSLATSQVT-LPLGTSMTFLSGTHSTMSQGLSHSEMTNLMSRGPE 9711
Query: 286 E--------KELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKS 337
E +S ++L+S+ ++S + + L S +S + SL L++ +
Sbjct: 9712 SLSWTSPRFVETTRSSSSLTSLPLTTSLSPVSSTLLDSSPSSPLPV--TSLILPGLVKTT 9769
Query: 338 EPVD--QRRHTAGKAIVDSRSAQPKETSE 364
E +D T+ + S S + TSE
Sbjct: 9770 EVLDTSSEPKTSSSPNLSSTSVEIPATSE 9798
Score = 31.2 bits (69), Expect = 3.3
Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 19/158 (12%)
Query: 181 QIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNR---SSNMTA 237
+I S +R + ESS +L T QP TSS + R S +
Sbjct: 10350 EITSSSATPYRVDTSLGTESSTTEGRLVMVSTLDTSSQPGRTSSSPILDTRMTESVELGT 10409
Query: 238 TTKFVSTTSQNTQLVRP----------PIRSHHSNTRDTVKQGISRTSANVTIRKGPHEK 287
T S +T+L R P + H T VK +TS + KG H
Sbjct: 10410 VTSAYQVPSLSTRLTRTDGIMEHITKIPNEAAHRGTIRPVKG--PQTSTSPASPKGLHTG 10467
Query: 288 ELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARP 325
+ +T +++KT+++ KT SR+ + + P
Sbjct: 10468 GTKRMETTTTALKTTTT----ALKTTSRATLTTSVYTP 10501
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 40.0 bits (92), Expect = 0.007
Identities = 70/334 (20%), Positives = 130/334 (38%), Gaps = 42/334 (12%)
Query: 53 RDQRVVTSEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNST 112
+ Q V +SED E + +E K P ++ VV K P+ + S+
Sbjct: 315 KQQPVESSEDSSDESDS--------SSEEEKKPPTKA----VVSKATTKPPPAKKAAESS 362
Query: 113 VVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQK-QDANMPK 171
DS+ + D + A KN+S K +TT+ + A PK
Sbjct: 363 --------SDSSDS-------DSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPK 407
Query: 172 KPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNR 231
+PV G + ++ K +S + TKK+ AT TKP+ +++++ + +
Sbjct: 408 QPVGGGQK--LLTRKADSSSSEEESSSSEEEKTKKMVAT----TKPKATAKAALSLPAKQ 461
Query: 232 SSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQ 291
+ + + S +S + + +S V G + S + +KG E
Sbjct: 462 APQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGG-AAPSKPASAKKGKAE----S 516
Query: 292 SKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPA-SLSNDKLMEKSEPVDQRRHTAGKA 350
S ++ S + + ++ K R A + A + N K + SE ++ + A A
Sbjct: 517 SNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKA--A 574
Query: 351 IVDSRSAQPKETSEERKARLSEWKAGKGRVLKRP 384
+V S+S K+ + A+ +E K L+ P
Sbjct: 575 VVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTP 608
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 40.0 bits (92), Expect = 0.007
Identities = 77/405 (19%), Positives = 149/405 (36%), Gaps = 47/405 (11%)
Query: 10 LQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVT---SEDQVQE 66
LQ PP A R Q HL KT + ++ E S+D++ T + + +
Sbjct: 85 LQWPPIYTAA------REQTPFRHLYTSKT---HLKKAEYKKSKDEKGGTPLKKDSKKKG 135
Query: 67 GTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQT 126
G+ ++K +E KR E+ PLK S+E S + + +Q
Sbjct: 136 GSYATNPESKQIVEEKTKRQNEADKT--------PLKSSHENEQSKKSKSSSETNPESQN 187
Query: 127 PHLLLT------EDDPQSQHMTLSQAFHLKNNSKK--KQMTTEKQKQDANMPKKPVLGSY 178
+ + D ++ T ++ H KNN KK K+ T + + +
Sbjct: 188 SKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDF 247
Query: 179 RGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTAT 238
+ QS S +++ S +K S K TK K N + A
Sbjct: 248 LMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKD--------TKKNAKKSSDAE 299
Query: 239 TKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSS 298
++ ++++ V+ ++ +D K+ + + + + G + E +K
Sbjct: 300 SEDSKDAKKDSKKVKKNVK------KDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKK 353
Query: 299 VKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAI--VDSRS 356
+K + K S +E + ++ + ++K+ D ++ A K DS S
Sbjct: 354 LKKDDKKK--DTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSES 411
Query: 357 A-QPKETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNEK 400
+ KE+ ++ K + K + +K S EP G ++K
Sbjct: 412 ELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKK 456
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 39.7 bits (91), Expect = 0.009
Identities = 67/309 (21%), Positives = 113/309 (36%), Gaps = 40/309 (12%)
Query: 75 TKMADKENMKRPAESKNNTVVGKHCIPLKP--------SNELTN----STVVIDTHKPKD 122
T +K+N + + K V+ HC+ K + EL S + I PKD
Sbjct: 3815 TCTTEKDNPVKVSSGKKTGVLQGHCVRDKQKVLGEQQKTKELIGIRQKSKLPIKATSPKD 3874
Query: 123 SNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQI 182
+ H+ T+ Q + + K K +TT + + PV ++R I
Sbjct: 3875 TFPPNHMSNTKASKMKQ---------VSQSEKTKALTTSSCVDVKS--RIPVKNTHRDNI 3923
Query: 183 VQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFV 242
+ + RK + + K K PV S V + ++ T TT
Sbjct: 3924 I-----AVRKACATQKQGQPEKGKAKQLPSKL----PVKVRSTCVTTTTTTATTTTTTTT 3974
Query: 243 STTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTS 302
+TT+ T VR +GIS + + R EK++ ++ LS + S
Sbjct: 3975 TTTTSCTVKVRKSQLKEVCKHSIEYFKGISGETLKLVDRLSEEEKKM---QSELSDEEES 4031
Query: 303 SSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPKET 362
+S RN +LS + + + DK E + P+ + AG SR P+
Sbjct: 4032 TS----RNTSLSETSRGGQPSVTTKSARDKKTE-AAPLKSKSEKAGSEKRSSRRTGPQSP 4086
Query: 363 SEERKARLS 371
E R++
Sbjct: 4087 CERTDIRMA 4095
>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
Length = 1247
Score = 39.7 bits (91), Expect = 0.009
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 17/183 (9%)
Query: 192 KPLQVKDESSAATKKLSATIPKA---TKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQN 248
KP + K++S +PKA +K + SS N+ + A+ + + +
Sbjct: 1061 KPKSTEGMKGRKGKQVSEILPKAEVQSKRKRTEGSSPPDSKNKGPTVKASKEKHADGATK 1120
Query: 249 TQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTSSSQGII 308
T + P RD Q +TS K + K+A S S +
Sbjct: 1121 TPAAKRPA------ARDRSSQPPKKTSLK-------ENKVKIPKKSAGKSCPPSRKEKEN 1167
Query: 309 RNKTLSRSIASEVIARPASLSN-DKLMEKSEPVDQRRHTAGKAIVDSRSAQPKETSEERK 367
NK S+SIASE + +PA + + + R+ ++GK + P+ ++ +RK
Sbjct: 1168 TNKRPSQSIASETLTKPAKQKGAGESSSRPQKATNRKQSSGKTRARPSTKTPESSAAQRK 1227
Query: 368 ARL 370
+L
Sbjct: 1228 RKL 1230
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 39.3 bits (90), Expect = 0.012
Identities = 64/367 (17%), Positives = 142/367 (38%), Gaps = 28/367 (7%)
Query: 16 QRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKLKT 75
+R + A +E+ RQK +E L + T + + + T+ QV EG
Sbjct: 34 ERRRRARQERLRQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQV-EGDDEAAFLE 92
Query: 76 KMADKENMKRPA-------ESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPH 128
++A +E ++ + + + + + L PS + N T +T + ++ +++
Sbjct: 93 RLARREERRQKRLQEALERQKEFDPTITDASLSL-PSRRMQNDTAENETTEKEEKSESRQ 151
Query: 129 LLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSKIN 188
++ ++ + Q ++ + K+ EK++++ PK+ +G +G+ +K+
Sbjct: 152 ERYEIEETETVTKSY-QKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQGEEKGTKVQ 210
Query: 189 SFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQN 248
+ R+ LQ + + I K +P K S M F SQN
Sbjct: 211 AKREKLQEDKPTFKKEEIKDEKIKKDKEP----------KEEVKSFMDRKKGFTEVKSQN 260
Query: 249 TQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKEL---LQSKTALSSVKTSSSQ 305
+ + ++ +T +T + R S + +G + E L+ S
Sbjct: 261 GEFMTHKLK----HTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEF 316
Query: 306 GIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPKETSEE 365
++ K ++ E + + K++E+ E ++ K + + KE E
Sbjct: 317 EKLKQKQQEAALELEELKKKRE-ERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIER 375
Query: 366 RKARLSE 372
R+A +E
Sbjct: 376 RRAEAAE 382
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 39.3 bits (90), Expect = 0.012
Identities = 64/367 (17%), Positives = 142/367 (38%), Gaps = 28/367 (7%)
Query: 16 QRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKLKT 75
+R + A +E+ RQK +E L + T + + + T+ QV EG
Sbjct: 40 ERRRRARQERLRQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQV-EGDDEAAFLE 98
Query: 76 KMADKENMKRPA-------ESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPH 128
++A +E ++ + + + + + L PS + N T +T + ++ +++
Sbjct: 99 RLARREERRQKRLQEALERQKEFDPTITDASLSL-PSRRMQNDTAENETTEKEEKSESRQ 157
Query: 129 LLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSKIN 188
++ ++ + Q ++ + K+ EK++++ PK+ +G +G+ +K+
Sbjct: 158 ERYEIEETETVTKSY-QKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQGEEKGTKVQ 216
Query: 189 SFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQN 248
+ R+ LQ + + I K +P K S M F SQN
Sbjct: 217 AKREKLQEDKPTFKKEEIKDEKIKKDKEP----------KEEVKSFMDRKKGFTEVKSQN 266
Query: 249 TQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKEL---LQSKTALSSVKTSSSQ 305
+ + ++ +T +T + R S + +G + E L+ S
Sbjct: 267 GEFMTHKLK----HTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEF 322
Query: 306 GIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPKETSEE 365
++ K ++ E + + K++E+ E ++ K + + KE E
Sbjct: 323 EKLKQKQQEAALELEELKKKRE-ERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIER 381
Query: 366 RKARLSE 372
R+A +E
Sbjct: 382 RRAEAAE 388
>gi|45269141 multimerin 1 [Homo sapiens]
Length = 1228
Score = 38.9 bits (89), Expect = 0.016
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 412 EDEQRLFTEKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEP 471
ED+ R F + S+ +N++ +E + ND+ + + K V +L E
Sbjct: 365 EDKSREFQSLLKGLKSKSINVLIRDIVREQFKIFQNDMQETVAQLFKTVS-----SLSED 419
Query: 472 ITSPIENIIAIYEKAILAGAQP----IEEMRHTIVDILTMKSQEKANLGENMEKSCASKE 527
+ S + I + E + AQ ++E R T+ DI+ +++ N+ + M +C ++
Sbjct: 420 LESTRQIIQKVNESVVSIAAQQKFVLVQENRPTLTDIVELRN-HIVNVRQEMTLTC--EK 476
Query: 528 EVKEVSIEDTGVDVDPEKLEMESKLHRNLLFQDCEK-----EQDNKTKDPTHDVKTPNTE 582
+KE+ ++ T ++ E+ S L+ L + K EQ T+ + P E
Sbjct: 477 PIKELEVKQTHLEGALEQEHSRSILYYESLNKTLSKLKEVHEQLLSTEQVSDQKNAPAAE 536
Query: 583 TRTSCLIKY 591
+ ++ + +Y
Sbjct: 537 SVSNNVTEY 545
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.9 bits (89), Expect = 0.016
Identities = 79/389 (20%), Positives = 150/389 (38%), Gaps = 52/389 (13%)
Query: 14 PSQRAQSAFKEQRRQKLKEHLLRRKTLF---AYKQENEMLSSRDQRVVTSEDQVQEGTKV 70
P +R+ +E++R + R K+ A +++ + + V E VQE T
Sbjct: 182 PRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATST 241
Query: 71 LKLKTKMADKENMKRPAES--KNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPH 128
+ K+ E + P E + N+ K +P + + K ++T
Sbjct: 242 SDI-LKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSR----------SRSKSRSRTRS 290
Query: 129 LLLTEDDPQSQHMTLSQAFHLKNN-SKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSKI 187
+ P+ +H + S+++ + S +++ + ++ MP P R + + +
Sbjct: 291 RSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRR- 349
Query: 188 NSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQ 247
R + SS+++ S + PK KP P TSS K+ R S + + +
Sbjct: 350 ---RSSASLSGSSSSSSSSRSRSPPK--KP-PKRTSSPPRKTRRLSPSASPPR---RRHR 400
Query: 248 NTQLVRPPIRSHHSNT--------RDTVKQGISRTSANVTIRKG------------PHEK 287
+ PP ++ HS T + V RTS VT KG P +
Sbjct: 401 PSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKV 460
Query: 288 ELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKS-----EPVDQ 342
EL +S+ ++ R + ++ S + +S S D+ ++S E +
Sbjct: 461 ELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRR 520
Query: 343 RRHTAGKAIVDSRSAQPKETSEERKARLS 371
RRH+ ++ S + KETS + R S
Sbjct: 521 RRHSPSRSASPSPRKRQKETSPRGRRRRS 549
>gi|30795204 histone deacetylase 9 isoform 5 [Homo sapiens]
Length = 1069
Score = 38.1 bits (87), Expect = 0.027
Identities = 67/351 (19%), Positives = 133/351 (37%), Gaps = 36/351 (10%)
Query: 6 VPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQENEMLSS----RDQRVVTSE 61
+ + L + Q+ Q + +L+EH+ ++ L A KQ+ E+L QR
Sbjct: 59 IQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEV 118
Query: 62 DQVQEGTKVLKLKTKMADKENMKRPAESKNNT---VVGKHCIPLKPSNELTNSTVVIDTH 118
++ + ++ L+ K +E E K ++ K P+N +S + H
Sbjct: 119 ERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHS---VSRH 175
Query: 119 KPKDSNQTPHLLLTEDDP------QSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKK 172
H L + P S TL A K++ ++ +E + + K+
Sbjct: 176 PKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQ 235
Query: 173 PVLGSYRGQIVQSK----INSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVK 228
V +++ K + SF+K + ESS +S++ P + P N + +V
Sbjct: 236 KVAERRSSPLLRRKDGNVVTSFKKRMFEVTESS-----VSSSSPGSGPSSPNNGPTGSVT 290
Query: 229 SNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKE 288
N +S + T SQ L+ H ++ + + S + N+T+ P
Sbjct: 291 ENETSVLPPTPHAEQMVSQQRILI-------HEDSMNLLSLYTSPSLPNITLGL-PAVPS 342
Query: 289 LLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEP 339
L + +L + +Q + + L + PAS S+ + + +P
Sbjct: 343 QLNASNSLKEKQKCETQTLRQGVPLPGQYGGSI---PASSSHPHVTLEGKP 390
>gi|18379328 WW domain-containing adapter with a coiled-coil region
isoform 1 [Homo sapiens]
Length = 647
Score = 37.7 bits (86), Expect = 0.035
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 10/134 (7%)
Query: 204 TKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVR-----PPIRS 258
T +S +T+ QP N S +++ S+ SS + + +ST NT ++ PP+ S
Sbjct: 417 TSLISQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSS 476
Query: 259 HHSNTRDTVKQG---ISRTSANVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSR 315
+ VKQG S T VT K + + SS + S S G N T +
Sbjct: 477 QPKVSTPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPG--PNHTSNS 534
Query: 316 SIASEVIARPASLS 329
S AS P + S
Sbjct: 535 SNASNATVVPQNSS 548
>gi|18379332 WW domain-containing adapter with a coiled-coil region
isoform 3 [Homo sapiens]
Length = 544
Score = 37.7 bits (86), Expect = 0.035
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 10/134 (7%)
Query: 204 TKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVR-----PPIRS 258
T +S +T+ QP N S +++ S+ SS + + +ST NT ++ PP+ S
Sbjct: 314 TSLISQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPIKPLISTPPVSS 373
Query: 259 HHSNTRDTVKQG---ISRTSANVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSR 315
+ VKQG S T VT K + + SS + S S G N T +
Sbjct: 374 QPKVSTPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPG--PNHTSNS 431
Query: 316 SIASEVIARPASLS 329
S AS P + S
Sbjct: 432 SNASNATVVPQNSS 445
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 37.7 bits (86), Expect = 0.035
Identities = 75/371 (20%), Positives = 135/371 (36%), Gaps = 41/371 (11%)
Query: 16 QRAQSAFKEQRRQKLKEHLLR-----RKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKV 70
QR Q+ E R + ++ + R+T EN+ + ++ + + + G +
Sbjct: 920 QREQTEILESSRMRAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIER 979
Query: 71 LKLKTKMADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLL 130
++T D + P + + + K K +++++ + K K +TP +
Sbjct: 980 GNIETTSEDGQVFS-PKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKK-KRGPRTPPIT 1037
Query: 131 LTEDDPQSQHMTLSQAFHLKN----NSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSK 186
E+ L + + KN +S+KK+ T D ++P + + +
Sbjct: 1038 TKEE--------LVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATT 1089
Query: 187 INSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTS 246
S PL +AT AT T++ S +S +T +T T +
Sbjct: 1090 PGSTPSPLSSLLPPPPPVATATATTVPATLAA---TTAAAATSFSTSAITISTSATPTNT 1146
Query: 247 QNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTSSSQG 306
N SH R V++ + +VTI H K + Q K SSS G
Sbjct: 1147 TNNTFANED--SHRKCHRTRVEKV---ETPHVTIEDAQHRKPMDQ--------KRSSSLG 1193
Query: 307 IIRNKTLSRSIASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPKETSEER 366
+RS S R S SND + R+ D + E + ER
Sbjct: 1194 S------NRSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKSLEITGER 1247
Query: 367 KARLSEWKAGK 377
K+R+ + K G+
Sbjct: 1248 KSRIDQLKRGE 1258
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis critical
region 1 [Homo sapiens]
Length = 1400
Score = 37.0 bits (84), Expect = 0.060
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 197 KDESSAATKKLSATIPK--------ATKPQPVNTSSVTVKSNRSSNMTAT-TKFVSTTSQ 247
K + T +SAT+PK +T NT+S T+ + + T+T T +T
Sbjct: 1121 KTPTDTTTASVSATVPKNNTLSVITSTPSTAPNTASKTMTTASKTTTTSTITSLPTTVFT 1180
Query: 248 NTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTSSS 304
T + ++T D+ IS ++ T+ P ++T +SV T++S
Sbjct: 1181 TTSKITAGSEIPTASTTDSATTAISTKASGTTVESAPSTAPPTPAETTTASVPTTTS 1237
>gi|11225260 DNA topoisomerase I [Homo sapiens]
Length = 765
Score = 36.6 bits (83), Expect = 0.079
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 119 KPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSY 178
K KD ++ H D + +H + H K+ S +K K + ++ V S
Sbjct: 40 KEKDREKSKHSNSEHKDSEKKHKEKEKTKH-KDGSSEKHKDKHKDRDKEKRKEEKVRASG 98
Query: 179 RGQIVQSKINSFRKPLQVKDE 199
+I + K N F P Q+KDE
Sbjct: 99 DAKIKKEKENGFSSPPQIKDE 119
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 36.6 bits (83), Expect = 0.079
Identities = 105/575 (18%), Positives = 217/575 (37%), Gaps = 72/575 (12%)
Query: 79 DKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLLLTEDDPQS 138
D+++ +RP E + V + P P + + + P DS + L D
Sbjct: 714 DRDHERRPIERSQSPVHLRR--PQSPGASPSQAERL-----PSDSER--RLYSRSSDRSG 764
Query: 139 QHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKD 198
+LS + K + + + T+ +K D P + V+ + RK KD
Sbjct: 765 SCSSLSPPRYEKLDKSRLERYTKNEKTDKERTFDP-------ERVERERRLIRKEKVEKD 817
Query: 199 ESSAATKKLSATIP--KATKPQPVNTSSVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPI 256
++ +K P ++++ N + + RS N + K +L P
Sbjct: 818 KTDKQKRKGKVHSPSSQSSETDQENEREQSPEKPRSCNKLSREKADKEGIAKNRLELMPC 877
Query: 257 RSHHSNTRDTVKQGISRTSANVTIRKGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRS 316
TR K+G V K + + ++S ++ S ++ + + S
Sbjct: 878 VVL---TRVKEKEGKVIDHTPVEKLKAKLDNDTVKSSALDQKLQVSQTEPAKSDLSKLES 934
Query: 317 IASEVIARPASLSNDKLMEKSEPVDQRRHTAGKAIVDSRSAQPKETSEERKARLSEWKAG 376
+ +V S+ +++EK + R+H + D SA E E RK R ++
Sbjct: 935 VRMKVPKEKGLSSHVEVVEKEGRLKARKHLKPEQPADGVSAVDLEKLEARKRRFAD---- 990
Query: 377 KGRVLKRPPNSVVTQHEPAGQNEKPVGSFWTTMAEEDEQRLFTEKVNNTFSECLNLINEG 436
N + +P + P E ++ R+ ++K + S + L+ EG
Sbjct: 991 --------SNLKAEKQKPEVKKSSP---------EMEDARVLSKKQPDVSSREVILLREG 1033
Query: 437 CPKEDILVTLNDLIKNIPDAKKLVKYWICLALIEPITSPIENIIAIYEKAILAGAQPIEE 496
+ + +++K ++KK I L + + SP ++ + ++ +G++P +
Sbjct: 1034 --EAERKPVRKEILKR--ESKK-----IKLDRLNTVASP-KDCQELASISVGSGSRPSSD 1083
Query: 497 MRHTIVDILTMKSQEKANLGENMEKSCASKEEVKEVSIEDTGVDVDPEKLEMESKLHRNL 556
++ + + + + N +K SK ++K++ + D D PE+ + +N
Sbjct: 1084 LQARLGE---LAGESVENQEVQSKKPIPSKPQLKQLQVLD---DQGPER----EDVRKNY 1133
Query: 557 LFQDCEKEQDNKTKDPTHDVKTPNTETRTSCLIKYNVSTTPYLQSVKKKVQFDGTNSAFK 616
E + ++ +H V NTE + I + S ++ ++K Q + K
Sbjct: 1134 CSLRDETPERKSGQEKSHSV---NTEEKIGIDIDHTQSYRKQMEQSRRKQQME--MEIAK 1188
Query: 617 ELKFLTPVR-----RSRRLQEKTSKLPDMLKDHYP 646
KF +P + R L + K P + D P
Sbjct: 1189 SEKFGSPKKDVDEYERRSLVHEVGKPPQDVTDDSP 1223
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 36.6 bits (83), Expect = 0.079
Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 32/300 (10%)
Query: 120 PKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYR 179
PK S++ P P++ H S +Q ++Q PKKPV S R
Sbjct: 564 PKSSSKAPRA-----PPEAPHPGKRSC----QKSPAQQEPPQRQTVGTKQPKKPVKASAR 614
Query: 180 G---QIVQSKINSFRKPLQVKDESSAATKKLSAT-IPKA---TKPQPVNTSSVTVKSNRS 232
+Q + P +D++S K+ P+A +P+P S K ++S
Sbjct: 615 AGSRTSLQGEREPGLLPYGSRDQTSKDKPKVKTKGRPRAAASNEPKPAVPPSSEKKKHKS 674
Query: 233 SNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGI------SRTSA---NVTIRKG 283
S + A +K +S V H + T QG SRTS V +++
Sbjct: 675 S-LPAPSKALSGPEPAKDNVEDRTPEHFALVPLTESQGPPHSGSGSRTSGCRQAVVVQED 733
Query: 284 PHEKEL---LQSKTALSSVK-TSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEP 339
+ L L+ LS ++ T Q ++ TL + S + P S + E +P
Sbjct: 734 SRKDRLPLPLRDTKLLSPLRDTPPPQSLMVKITL--DLLSRIPQPPGKGSRQRKAEDKQP 791
Query: 340 VDQRRHTAGKAIVDSRSAQPKETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNE 399
++H++ K DS S K+ E + K + +K +S + H+ + + +
Sbjct: 792 PAGKKHSSEKRSSDSSSKLAKKRKGEAERDCDNKKIRLEKEIKSQSSSSSSSHKESSKTK 851
>gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]
Length = 1173
Score = 36.6 bits (83), Expect = 0.079
Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 19 QSAFKEQRRQKLKEHLLR--RKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKLKTK 76
Q+ F E+R++ + L+ R+++ +E+ + D Q ++ K + LKT
Sbjct: 329 QNKFPEKRKRNSVDSDLKSTRESMIPKARESFLEKRPD-----GPHQKEKFIKHIALKTP 383
Query: 77 ---MADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLLLTE 133
+ ++ K P++ + + G L PSN + H ++S+Q E
Sbjct: 384 GDVLRLEDISKEPSDETDGSSAG-----LAPSNSGNSGH-----HSTRNSDQIQVAGTKE 433
Query: 134 DDPQSQHMTLSQ-------AFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSK 186
Q H+ LSQ A +L+ N T EK+ + + + P GS +V
Sbjct: 434 TKMQKPHLPLSQEKSAIKKASNLQKNKTASSTTKEKETKLPLLSRVPSAGS---SLVPLN 490
Query: 187 INSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSS 233
+ P+ KD+ +++K+ S ++TK + + SN SS
Sbjct: 491 AKNCALPVSKKDKERSSSKECSGHSTESTKHKEHKAKTNKADSNVSS 537
>gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens]
Length = 1186
Score = 36.6 bits (83), Expect = 0.079
Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 19 QSAFKEQRRQKLKEHLLR--RKTLFAYKQENEMLSSRDQRVVTSEDQVQEGTKVLKLKTK 76
Q+ F E+R++ + L+ R+++ +E+ + D Q ++ K + LKT
Sbjct: 329 QNKFPEKRKRNSVDSDLKSTRESMIPKARESFLEKRPD-----GPHQKEKFIKHIALKTP 383
Query: 77 ---MADKENMKRPAESKNNTVVGKHCIPLKPSNELTNSTVVIDTHKPKDSNQTPHLLLTE 133
+ ++ K P++ + + G L PSN + H ++S+Q E
Sbjct: 384 GDVLRLEDISKEPSDETDGSSAG-----LAPSNSGNSGH-----HSTRNSDQIQVAGTKE 433
Query: 134 DDPQSQHMTLSQ-------AFHLKNNSKKKQMTTEKQKQDANMPKKPVLGSYRGQIVQSK 186
Q H+ LSQ A +L+ N T EK+ + + + P GS +V
Sbjct: 434 TKMQKPHLPLSQEKSAIKKASNLQKNKTASSTTKEKETKLPLLSRVPSAGS---SLVPLN 490
Query: 187 INSFRKPLQVKDESSAATKKLSATIPKATKPQPVNTSSVTVKSNRSS 233
+ P+ KD+ +++K+ S ++TK + + SN SS
Sbjct: 491 AKNCALPVSKKDKERSSSKECSGHSTESTKHKEHKAKTNKADSNVSS 537
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.124 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,077,034
Number of Sequences: 37866
Number of extensions: 1123247
Number of successful extensions: 4593
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 4310
Number of HSP's gapped (non-prelim): 498
length of query: 682
length of database: 18,247,518
effective HSP length: 109
effective length of query: 573
effective length of database: 14,120,124
effective search space: 8090831052
effective search space used: 8090831052
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.