FAM178A 12477

Name: FAM178A	Sequence: fasta or formatted (1186aa)		NCBI GI: 209915547
Description: hypothetical protein LOC55719 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {1173aa} hypothetical protein LOC55719 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 53 3 C cysteine 1.6 19 1 D aspartate 5.1 60 2 E glutamate 7.6 90 4 F phenylalanine 3.2 38 2 G glycine 5.0 59 2 H histidine 3.4 40 2 I isoleucine 5.1 60 2 K lysine 9.3 110 3 L leucine 9.9 117 2 M methionine 1.7 20 2 N asparagine 4.3 51 2 P proline 6.1 72 2 Q glutamine 4.0 48 1 R arginine 5.6 66 2 S serine 12.5 148 3 T threonine 4.7 56 2 V valine 4.0 47 2 W tryptophan 0.8 9 1 Y tyrosine 1.9 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC55719 isoform 2 FAM178A 0.977 hypothetical protein LOC55719 isoform 1 FAM178B 0.080 hypothetical protein LOC51252 isoform A FAM178B 0.015 hypothetical protein LOC51252 isoform B DSPP 0.013 dentin sialophosphoprotein preproprotein SFRS4 0.013 splicing factor, arginine/serine-rich 4 C2orf16 0.011 hypothetical protein LOC84226 NOLC1 0.011 nucleolar and coiled-body phosphoprotein 1 CYLC1 0.011 cylicin, basic protein of sperm head cytoskeleton 1... MLLT3 0.011 myeloid/lymphoid or mixed-lineage leukemia (trithor... CRKRS 0.011 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.011 Cdc2-related kinase, arginine/serine-rich isoform 1... TNIK 0.011 TRAF2 and NCK interacting kinase isoform 8 PRPF38B 0.011 PRP38 pre-mRNA processing factor 38 (yeast) domain ... SFRS18 0.011 splicing factor, arginine/serine-rich 130 SFRS18 0.011 splicing factor, arginine/serine-rich 130 BRWD1 0.010 bromodomain and WD repeat domain containing 1 isofor... BRWD1 0.010 bromodomain and WD repeat domain containing 1 isofor... THOC2 0.010 THO complex 2 TNIK 0.010 TRAF2 and NCK interacting kinase isoform 7 ATAD5 0.009 ATPase family, AAA domain containing 5 BOD1L 0.009 biorientation of chromosomes in cell division 1-like... NEFH 0.009 neurofilament, heavy polypeptide 200kDa MUC21 0.009 mucin 21 IWS1 0.009 IWS1 homolog SFRS12 0.009 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.009 splicing factor, arginine/serine-rich 12 isoform b [... LOC100170229 0.009 hypothetical protein LOC100170229 ANKRD12 0.009 ankyrin repeat domain 12 isoform 2 ANKRD12 0.009 ankyrin repeat domain 12 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.