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Search of human proteins with 148612813
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148612813 sickle tail isoform 2 [Homo sapiens]
(1264 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148612813 sickle tail isoform 2 [Homo sapiens] 2507 0.0
gi|148612857 sickle tail isoform 3 [Homo sapiens] 2425 0.0
gi|50843820 sickle tail isoform 1 [Homo sapiens] 2101 0.0
gi|115334682 SNAP25-interacting protein [Homo sapiens] 644 0.0
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 73 2e-12
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 67 1e-10
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 64 7e-10
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 64 7e-10
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 62 5e-09
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 59 3e-08
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 57 9e-08
gi|41281612 zinc finger protein 828 [Homo sapiens] 57 9e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 9e-08
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 57 1e-07
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 57 1e-07
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 57 1e-07
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 57 1e-07
gi|18959210 WIRE protein [Homo sapiens] 57 1e-07
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 56 2e-07
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 56 2e-07
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 56 2e-07
gi|33946327 nucleoporin 214kDa [Homo sapiens] 56 2e-07
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 56 2e-07
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 56 2e-07
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 56 2e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 56 2e-07
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 56 2e-07
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 56 2e-07
gi|54860079 nadrin isoform 1 [Homo sapiens] 55 3e-07
gi|54860105 nadrin isoform 2 [Homo sapiens] 55 4e-07
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 2507 bits (6498), Expect = 0.0
Identities = 1264/1264 (100%), Positives = 1264/1264 (100%)
Query: 1 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 60
MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL
Sbjct: 1 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 60
Query: 61 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 120
SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM
Sbjct: 61 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 120
Query: 121 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 180
PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK
Sbjct: 121 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 180
Query: 181 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 240
VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP
Sbjct: 181 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 240
Query: 241 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 300
HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS
Sbjct: 241 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 300
Query: 301 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 360
GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM
Sbjct: 301 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 360
Query: 361 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 420
QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ
Sbjct: 361 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 420
Query: 421 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR 480
PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR
Sbjct: 421 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR 480
Query: 481 ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK 540
ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK
Sbjct: 481 ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK 540
Query: 541 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 600
MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK
Sbjct: 541 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 600
Query: 601 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 660
AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST
Sbjct: 601 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 660
Query: 661 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 720
AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL
Sbjct: 661 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 720
Query: 721 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 780
DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG
Sbjct: 721 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 780
Query: 781 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 840
QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP
Sbjct: 781 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 840
Query: 841 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 900
QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD
Sbjct: 841 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 900
Query: 901 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 960
HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL
Sbjct: 901 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 960
Query: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1020
GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP
Sbjct: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1020
Query: 1021 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG
Sbjct: 1021 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS
Sbjct: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS
Sbjct: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
Query: 1201 PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1260
PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA
Sbjct: 1201 PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1260
Query: 1261 KETS 1264
KETS
Sbjct: 1261 KETS 1264
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 2425 bits (6284), Expect = 0.0
Identities = 1229/1264 (97%), Positives = 1229/1264 (97%), Gaps = 35/1264 (2%)
Query: 1 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 60
MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL
Sbjct: 81 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 140
Query: 61 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 120
SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM
Sbjct: 141 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 200
Query: 121 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 180
PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK
Sbjct: 201 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 260
Query: 181 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 240
VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP
Sbjct: 261 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 320
Query: 241 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 300
HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS
Sbjct: 321 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 380
Query: 301 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 360
GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM
Sbjct: 381 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 440
Query: 361 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 420
QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ
Sbjct: 441 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 500
Query: 421 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR 480
PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRET
Sbjct: 501 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRET- 559
Query: 481 ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK 540
SEKMMKTTANRNHTDSAGTPHVSGGK
Sbjct: 560 ----------------------------------SEKMMKTTANRNHTDSAGTPHVSGGK 585
Query: 541 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 600
MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK
Sbjct: 586 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 645
Query: 601 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 660
AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST
Sbjct: 646 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 705
Query: 661 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 720
AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL
Sbjct: 706 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 765
Query: 721 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 780
DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG
Sbjct: 766 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 825
Query: 781 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 840
QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP
Sbjct: 826 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 885
Query: 841 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 900
QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD
Sbjct: 886 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 945
Query: 901 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 960
HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL
Sbjct: 946 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 1005
Query: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1020
GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP
Sbjct: 1006 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1065
Query: 1021 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG
Sbjct: 1066 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1125
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS
Sbjct: 1126 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1185
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS
Sbjct: 1186 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1245
Query: 1201 PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1260
PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA
Sbjct: 1246 PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1305
Query: 1261 KETS 1264
KETS
Sbjct: 1306 KETS 1309
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 2101 bits (5443), Expect = 0.0
Identities = 1064/1090 (97%), Positives = 1069/1090 (98%), Gaps = 3/1090 (0%)
Query: 1 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 60
MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL
Sbjct: 81 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHL 140
Query: 61 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 120
SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM
Sbjct: 141 SETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRM 200
Query: 121 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 180
PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK
Sbjct: 201 PNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLK 260
Query: 181 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 240
VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP
Sbjct: 261 VYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVP 320
Query: 241 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 300
HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS
Sbjct: 321 HSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKPDEDMS 380
Query: 301 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 360
GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM
Sbjct: 381 GKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSM 440
Query: 361 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 420
QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ
Sbjct: 441 QAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQ 500
Query: 421 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR 480
PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR
Sbjct: 501 PDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETR 560
Query: 481 ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK 540
ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK
Sbjct: 561 ERMQAMEKQIASLTGLVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSAGTPHVSGGK 620
Query: 541 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 600
MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK
Sbjct: 621 MLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQELLRAMMKK 680
Query: 601 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 660
AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST
Sbjct: 681 AELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDST 740
Query: 661 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 720
AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL
Sbjct: 741 AASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKL 800
Query: 721 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 780
DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG
Sbjct: 801 DSLLKRVRSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSG 860
Query: 781 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 840
QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP
Sbjct: 861 QPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVP 920
Query: 841 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 900
QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD
Sbjct: 921 QEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD 980
Query: 901 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 960
HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL
Sbjct: 981 HYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKL 1040
Query: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1020
GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP
Sbjct: 1041 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1100
Query: 1021 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ + S M V ++ P
Sbjct: 1101 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQAFQ---KCSFMDVNSNSHAEPS 1157
Query: 1081 TLDKPGKQSK 1090
D K ++
Sbjct: 1158 RADSHVKDTR 1167
Score = 414 bits (1065), Expect = e-115
Identities = 220/275 (80%), Positives = 226/275 (82%), Gaps = 19/275 (6%)
Query: 990 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEE 1049
+V T N + ASS R P E P + PP S+S+
Sbjct: 1688 LVDTSCSSNRDSVASSSHIAQEASPRPLLVPDEGPTAL---EPPTSIPSASR-------- 1736
Query: 1050 GDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1109
+GSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG
Sbjct: 1737 --------KGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1788
Query: 1110 DFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPA 1169
DFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPA
Sbjct: 1789 DFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPA 1848
Query: 1170 HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQ 1229
HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQ
Sbjct: 1849 HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQ 1908
Query: 1230 GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1264
GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS
Sbjct: 1909 GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1943
Score = 31.2 bits (69), Expect = 6.6
Identities = 68/325 (20%), Positives = 117/325 (36%), Gaps = 51/325 (15%)
Query: 743 DGLLKGTDAAQAAQYMAME-KATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSG 801
DG LK A+ + + + T ++ QE+ + S P T K+ L
Sbjct: 1611 DGTLKQHKEAKRFEIARSQPEDTPENTVRRQEQPSIESTSPISRTDEI--RKNTYRTLDS 1668
Query: 802 MMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATST--LQMSQAPQS---- 855
+ Q + + S ++ + + N VASS + QEA+ L + P +
Sbjct: 1669 LEQTIKQLENTISEMSPKALVDTSCSSNRDSVASSSHIAQEASPRPLLVPDEGPTALEPP 1728
Query: 856 ---PQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLE 912
P GS+ +SAKNR +++K K + K Q+ Y
Sbjct: 1729 TSIPSASRKGSSGAPQTSRMPVPMSAKNRPGTLDKPGK--QSKLQDPRQYR--------- 1777
Query: 913 EAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDS--PNSEQDLEKLGGK------- 963
QAN + P + LP P + S P+S D L
Sbjct: 1778 --QANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSI 1835
Query: 964 -----SPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATK 1018
SP PP S +P + + + +TG+ +++ SPQ++ +
Sbjct: 1836 ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF---------SPQSQNGR 1886
Query: 1019 YPAEEPASAWTPSPPPVTTSSSKDE 1043
P P +++ SPP +S S ++
Sbjct: 1887 AP---PPLSFSSSPPSPASSVSLNQ 1908
Score = 30.8 bits (68), Expect = 8.6
Identities = 65/292 (22%), Positives = 108/292 (36%), Gaps = 51/292 (17%)
Query: 1001 AKASSEDAGPSPQTRATKYPAEE-PASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
A++S PS + A PA+ P A +P+ P TS+ + + + + G
Sbjct: 887 AQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSP----QIPMNG 942
Query: 1060 SSGAPQTSRMPVPMSAKNRPGTLDKPGK--QSKLQDPRQYR-----------QANGSAKK 1106
S+ +SAKNR +++K K + K Q+ Y QAN
Sbjct: 943 SAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSI 1002
Query: 1107 SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTG 1166
+ P + LP P + S P+S D L SP
Sbjct: 1003 PNLEMPPATGPLPRGDAPVDKVELSEDS--PNSEQDLEKLGGK------------SPPPP 1048
Query: 1167 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF---------SPQSQNGRAP---PPLSF 1214
PP S +P + + + +TG+ +++ SPQ++ + P P ++
Sbjct: 1049 PPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAW 1108
Query: 1215 SSSPPSPASSVSLN------QGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1260
+ SPP +S S + +G K + S+ N S+S A PS A
Sbjct: 1109 TPSPPPVTTSSSKDEEEEEEEGDKIMAELQAFQKCSFMDVN-SNSHAEPSRA 1159
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 644 bits (1661), Expect = 0.0
Identities = 457/1198 (38%), Positives = 654/1198 (54%), Gaps = 149/1198 (12%)
Query: 1 MQTSEMDRKREAFLEHLKQKYPHHASAIMGHQERLRDQ-------TRSPKLSHSPQPPSL 53
+Q ++ DRKR+AF++HLK KYP HA A+ G Q+R+R+Q TRS + + QP L
Sbjct: 71 LQKADADRKRDAFMDHLKSKYPQHALALRGQQDRMREQPNYWSFKTRSSRHTQGAQP-GL 129
Query: 54 GDPVEHLSETSADSLEAMSEGDAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGD 113
D LS SA+SLE MSE + P FSR +R R SLP+ RS +QTK RS GVL+LQ+G+
Sbjct: 130 ADQAAKLSYASAESLETMSEAELPLGFSRMNRFRQSLPLSRSASQTKLRSPGVLFLQFGE 189
Query: 114 ETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNI 173
ET+++ + +E++S DT+ AL FPQ+LTM ML+SP+ AI IKDE+RNV+YEL DVR+I
Sbjct: 190 ETRRVHITHEVSSLDTLHALIAHMFPQKLTMGMLKSPNTAILIKDEARNVFYELEDVRDI 249
Query: 174 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 233
QDRS++K+Y K+P +A NGD+R RE+VYA + R + + PH S
Sbjct: 250 QDRSIIKIYRKEPLYAAFPGSHLTNGDLR--REMVYASRESSPTRRLNNLSPAPHLASGS 307
Query: 234 PPSTPVPHSMP-------PSPSRIPYGGTRSMVVPGNATI-PRDRISSLPVSRPISPSPS 285
PP +P +P PS SR+ Y G R G+ +R+ P ++ +SPSPS
Sbjct: 308 PPPG-LPSGLPSGLQSGSPSRSRLSYAGGRPPSYAGSPVHHAAERLGGAPAAQGVSPSPS 366
Query: 286 AILERRDVKPDEDMSGK--NIAMYRNEGFYADPY-LYHEGRMSIASSHGGHPLDVPDHII 342
AILERRDVKPDED++ K + + + EG YADPY L HEGR+S+A++ G P P
Sbjct: 367 AILERRDVKPDEDLASKAGGMVLVKGEGLYADPYGLLHEGRLSLAAA-AGDPFAYPGAGG 425
Query: 343 AYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLR 402
Y R ++RS S Y ++Q+++ E SLY+ P + G + PP+SP +++D+
Sbjct: 426 LYKRGSVRSLSTYSAAALQSDL--EDSLYKAAGGGGP-LYGDGYGFRLPPSSPQKLADVA 482
Query: 403 MIDMHAHYNAHGPPHTMQ---PDRASPSRQAFKKEPGTL-VYIEKP----RSAAGLSSL- 453
A PPH+ P R SP RQ+F+K+ G+ V+ E P RSA S+
Sbjct: 483 -----APPGGPPPPHSPYSGPPSRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAG 537
Query: 454 ---VDLGPPLMEKQVFAYSTATIPKDRETRERMQAMEKQIASLTGLVQSALFKG--PITS 508
+L P E+ + + KD ETRERM+AMEKQIASLTGLVQSAL +G P T
Sbjct: 538 APPSELFPGPGERSLVGFGPPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEPETP 597
Query: 509 YSK-DASSEKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVGTSAIHMSLL 567
K + S+ + + S+G VSG SA S+ P QP V + + L
Sbjct: 598 SEKIEGSNGAATPSAPCGSGGRSSGATPVSGPPPPSA--SSTPAGQPTAVSRLQMQLHLR 655
Query: 568 EMRRSVAELRLQLQQMRQLQLQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQRVLV 627
++ S ++LR QLQQ+R+LQLQNQE +RA++K+ E E+S +V E +R EDP+QRQR LV
Sbjct: 656 GLQNSASDLRGQLQQLRKLQLQNQESVRALLKRTEAELSMRVSEAARRQEDPLQRQRTLV 715
Query: 628 EQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVTLKDVEDGAFLLRQVGEAVAT 687
E+ER +YL++EE I ++L +LE VE +++D + RLV ++E+ A +L+Q+GE +
Sbjct: 716 EEERLRYLNDEELITQQLNDLEKSVEKIQRDVSHNHRLVPGPELEEKALVLKQLGETLTE 775
Query: 688 LKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRVRSMTDVLTMLRRHVTDGLLK 747
LK FP LQ+KMR +LR+EVEAV+FLKEEP +LD LLKR R VTD L
Sbjct: 776 LKAHFPGLQSKMRVVLRVEVEAVKFLKEEPQRLDGLLKRCRG-----------VTDTL-- 822
Query: 748 GTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHA 807
AQ + + L SQ T+ F+ + E+ P S
Sbjct: 823 ----AQIRRQVDEGVWPPPNNLLSQSPKKVTAETDFNKS-----VDFEMPPPS------- 866
Query: 808 QSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQS 867
P NL H S PA T P G+ +
Sbjct: 867 ------------------PPLNL-HELSGPAEGASLT--------------PKGGNPTKG 893
Query: 868 LFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEM 927
L SV ++AVS+E AE+ WEEKR L Y+ K+ +LLEE QA ++K+IP+L+
Sbjct: 894 LDTPGKRSV---DKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIPDLDC 950
Query: 928 PPAT--GPLPRGD-----APVDKVELSEDSPNSEQDLEKL-------GGKSPPPPPPPPR 973
GP P D AP + P+ + ++L S PPPPPPR
Sbjct: 951 ASKAHPGPAPTPDHKPPKAPHGQKAAPRTEPSGRRGSDELTVPRYRTEKPSKSPPPPPPR 1010
Query: 974 RSYLPGSGLTTTRSGDVVYTGRKEN-ITAKASSEDAG-PSPQTRATKYPAEEPASAWTPS 1031
RS+ GLTTTR+G+VV T +K++ KA SE+ PQ + + +E A S
Sbjct: 1011 RSFPSSHGLTTTRTGEVVVTSKKDSAFIKKAESEELEVQKPQVKLRRAVSEVARPA---S 1067
Query: 1032 PPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVP-----MSAKNRPGTLDKP- 1085
PP+ S+ KDE++E D+I+AEL+ G+ ++ P +A+ + G+ DK
Sbjct: 1068 TPPIMASAIKDEDDE----DRIIAELESGGGSVPPMKVVTPGASRLKAAQGQAGSPDKSK 1123
Query: 1086 -GKQ-SKLQDPRQYRQANGSAKKSGGDFKPTS-----PSLPASKIPALSPSSGKSSSL 1136
GKQ ++ + +QA +K+ G + +S PS + IP L+ ++SS+
Sbjct: 1124 HGKQRAEYMRIQAQQQATKPSKEMSGSNETSSPVSEKPSASRTSIPVLTSFGARNSSI 1181
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 73.2 bits (178), Expect = 2e-12
Identities = 108/537 (20%), Positives = 184/537 (34%), Gaps = 45/537 (8%)
Query: 759 AMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQ 818
A +KA++++ S EE G P P + + SS
Sbjct: 78 AKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDD 137
Query: 819 HSVALLNPAQN--LPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSV 876
P Q P ++ A P++A S+ S + + P N + + +
Sbjct: 138 EEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTK 197
Query: 877 SAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPR 936
+ A + K + + + E+A A K++P ++ A P+
Sbjct: 198 APPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVV-AKAPVKA 256
Query: 937 GDAPVDKVELSEDSPNSEQDLEKLGGKS--------PPPPPPPPRRSYLPGSGLTTTRSG 988
P K SEDS + E++ +K K+ PPP PPP++S L T
Sbjct: 257 ATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKS------LGTQPPK 310
Query: 989 DVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPV-------TTSSSK 1041
V +++ + + S D S K P + S T PPP + SS
Sbjct: 311 KAV--EKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDS 368
Query: 1042 DEEEEEEEGDKIMAELQGSSGAPQ-TSRMPV--PMSAKNRPGTLDKPGKQSKLQDPRQYR 1098
D E++E K + SS P T++ P P +A +P + K
Sbjct: 369 DSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEE 428
Query: 1099 QANGS----AKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP 1154
+++ S KK KP + + A +PA G S S SS +K
Sbjct: 429 ESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKS 488
Query: 1155 SI---------ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN 1205
++ + P P + + S S S+ S + + GKG S PQ+
Sbjct: 489 AVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKG---SPRPQAPK 545
Query: 1206 GRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKE 1262
L+ + + S + K + + QN ++ +A AK+
Sbjct: 546 ANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKK 602
Score = 54.3 bits (129), Expect = 7e-07
Identities = 72/336 (21%), Positives = 123/336 (36%), Gaps = 23/336 (6%)
Query: 930 ATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLP---GSGLTTTR 986
A GP+ + K S DS +S ++ E++ G P +R LP + +
Sbjct: 70 ANGPVAK---KAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASES 126
Query: 987 SGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEE 1046
S + + K G PQ +A K P ++ S+ + S SSS+DE +
Sbjct: 127 SSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSD-----SSSEDEPPK 181
Query: 1047 EEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKK 1106
++ ++ + AP P A + + S D + +A + KK
Sbjct: 182 NQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKK 241
Query: 1107 SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTG 1166
+ K P A +P+ SSS SSS + P KP S+ P
Sbjct: 242 TVPK-KQVVAKAPVKA--ATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAP 298
Query: 1167 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPP---LSFSSSPPSP-- 1221
PP S P +++ Q + + S+ + PP +S +++ P P
Sbjct: 299 PPKKSLGTQP--PKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAK 356
Query: 1222 --ASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKA 1255
A S S + + + PS + +N S+ A
Sbjct: 357 KAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPA 392
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 67.0 bits (162), Expect = 1e-10
Identities = 106/469 (22%), Positives = 168/469 (35%), Gaps = 70/469 (14%)
Query: 779 SGQPFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPA 838
SG P + P +++ P S +V S H+ A +N A + A +PA
Sbjct: 2314 SGTPPTAANYPSSSRTPQAPASANLVGPR---------SAHATAPVNIAGSRTAAALAPA 2364
Query: 839 VPQEATSTLQMSQAP-QSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQ 897
A +S A SP++P++ VS + +++A +
Sbjct: 2365 SLTSARMAPALSGANLTSPRVPLSA----------YERVSGRTSPPLLDRARSRTPPSAP 2414
Query: 898 NLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDL 957
+ + + ++ M P+ + P PR P S S+Q
Sbjct: 2415 SQSRMTSER-----APSPSSRMGQAPSQSLLPPAQDQPRSPVP---------SAFSDQSR 2460
Query: 958 EKLGGKSPPPPPPPPRRSYLPGSGLTTTRS-GD------VVYTGRKENITAKASSEDAGP 1010
+ +P +S G+ TTT S GD V G + + +
Sbjct: 2461 CLIAQTTPVAGS----QSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQ 2516
Query: 1011 SPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTS--- 1067
P A PA+E S+ + S ++SSS ++ +GSS Q
Sbjct: 2517 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVAL 2576
Query: 1068 -RMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPAL 1126
R+P P A P + G+ + ++ R+++ S+ S +S S +S
Sbjct: 2577 KRVPSPTPA---PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS----- 2628
Query: 1127 SPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQ 1186
S SS SSS SSS SS+ P+P P P SP+ PP S P SL+
Sbjct: 2629 SSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLR-- 2686
Query: 1187 SLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTR 1235
LS+SP + +P P SP SS S +G R
Sbjct: 2687 ------DSRSLSYSPVERRRPSPQP-----SPRDQQSSSSERGSRRGQR 2724
Score = 50.8 bits (120), Expect = 8e-06
Identities = 76/331 (22%), Positives = 119/331 (35%), Gaps = 53/331 (16%)
Query: 968 PPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSED---AGPSPQTRATKY----- 1019
P P RR++ S + + S T R + +A A + AG SP + +
Sbjct: 253 PAPKSRRAHRSTSADSASSSD----TSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDA 308
Query: 1020 PAEEPASAWT--PSPPPVTTSS------SKDEEEEEEEGDKIMAELQGSSGAPQTSRMPV 1071
P EP + T PS P T KD++++E+ + + SS P+ P
Sbjct: 309 PFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPA-PT 367
Query: 1072 PMSAKNRPGT-------------LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPS- 1117
P+ A+ G+ ++ P + S +D + + S + P SP
Sbjct: 368 PLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQP 427
Query: 1118 LPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPS 1177
S+ + SP S K + P S + S+ P A S P
Sbjct: 428 TKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSP 487
Query: 1178 VSNGSLKFQSLTHTGKGHHLSFSPQSQ---------NGRAPPPLSFSSSPPSPASSVSLN 1228
+ + +S T T +GH S SPQ + R+P S SP P S S N
Sbjct: 488 ATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRN 547
Query: 1229 QGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1259
+G S A+ G S +P+T
Sbjct: 548 TQRRG---------RSRSARRGRSHSRSPAT 569
Score = 43.9 bits (102), Expect = 0.001
Identities = 64/269 (23%), Positives = 99/269 (36%), Gaps = 19/269 (7%)
Query: 1010 PSPQTRATKYPAEEPASAWTPSPPPVTTSSS--KDEEEEEEEGDKIMAELQGSSGAPQT- 1066
PS ++R+ P S TPS ++ SS KD G PQT
Sbjct: 1435 PSRRSRSGSSPGLRDGSG-TPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTP 1493
Query: 1067 ---SRMPVPMSAKNRPGT--LDKPGKQSKLQDPRQYRQANGSAKKSGG----DFKPTSPS 1117
SR P N+ T ++ G +S + R G +SG D KP++
Sbjct: 1494 RPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASP 1553
Query: 1118 LPASKIPALSPSSGKSSSLP----SSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSAS 1173
S+ + SP S + P S SG S + + P + + SP+ +A
Sbjct: 1554 QERSESDS-SPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAP 1612
Query: 1174 LIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKG 1233
S S+ S + ++ S S S GR P P SS+ SP +G
Sbjct: 1613 RAQSGSDSSPEPKAPAPRALPRR-SRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRG 1671
Query: 1234 TRTIHTPSLTSYKAQNGSSSKATPSTAKE 1262
+R+ P S SS+++P ++
Sbjct: 1672 SRSSPEPKTKSRTPPRRRSSRSSPELTRK 1700
Score = 43.5 bits (101), Expect = 0.001
Identities = 87/347 (25%), Positives = 131/347 (37%), Gaps = 57/347 (16%)
Query: 963 KSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRAT----K 1018
K P P PP P S ++RS +K+ SE + P + + + K
Sbjct: 161 KQPAPEPPKPYSLVRESS---SSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKK 217
Query: 1019 YPAE-EPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ--------GSSGAPQTSRM 1069
+ +E E SP P + SKD++ + + + S+ + TSR
Sbjct: 218 HRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRS 277
Query: 1070 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSG-GDFKPTSPSLP--ASKIPAL 1126
SA + T G+ P R+ G A S G PS P A+K P+
Sbjct: 278 R-SRSAAAKTHTTALAGRSPS---PASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPS- 332
Query: 1127 SP-------SSGKSSSLPSSSGD-SSNLPNPPATKP-----------SIASNPLSPQTGP 1167
SP KS++ PS S + SS P PPA P +A+ PLS +
Sbjct: 333 SPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVN 392
Query: 1168 PAHSAS------------LIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFS 1215
P AS +P S+ S T H S SP+S AP P S
Sbjct: 393 PPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPK-PAPAPGSHR 451
Query: 1216 SSPPSPASSVSLNQGAKGTRT-IHTPSLTSYKAQNGSSSKATPSTAK 1261
SP S + AK ++ HTPS ++++ +++K S ++
Sbjct: 452 EISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSR 498
Score = 41.2 bits (95), Expect = 0.006
Identities = 74/352 (21%), Positives = 121/352 (34%), Gaps = 40/352 (11%)
Query: 950 SPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGD-VVYTGRKENITAKASSEDA 1008
+P + L G +PP P S P + + G + NI ++
Sbjct: 2302 TPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAAL 2361
Query: 1009 GPSPQTRATKYPAEEPASAWTP--------------SPP----------PVTTSSSKDEE 1044
P+ T A PA A+ +P SPP P S S+
Sbjct: 2362 APASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTS 2421
Query: 1045 EEEEEGDKIMAELQGSSGAPQTS---RMPVPMSAKNRPGTL---DKPGKQSKLQDPRQYR 1098
E M + S P R PVP + ++ L P S+
Sbjct: 2422 ERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVA 2481
Query: 1099 QANGSAKKSGGDFKPTSPSLPASKI--PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSI 1156
SA G +P +P S + P S + + S+L + + ++ S
Sbjct: 2482 TTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSS 2541
Query: 1157 ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQS--QNGRAPPPLSF 1214
+S+ S + + S S SL Q + + +P+ + GR P P
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPA 2601
Query: 1215 -----SSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAK 1261
SSS S +SS S + + + + + S +S + + SSS ++PS AK
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653
Score = 38.9 bits (89), Expect = 0.031
Identities = 60/263 (22%), Positives = 90/263 (34%), Gaps = 20/263 (7%)
Query: 970 PPPRRSYLPGSGLTTTRSGDVVYTGRKENIT-AKASSEDAGPSPQTRATKYPAEEPASAW 1028
P RRS +RS GR + T A+ S P + ++ PA +
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648
Query: 1029 TPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-----SRMPVPMSAKNRPGTLD 1083
+ +P S S+ + A G S + SR P ++R +L
Sbjct: 649 SRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLV 708
Query: 1084 KPGKQSKLQDPRQYRQANGSAKKSGG---DFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
+ G+ R+ R + S +K+ + S S P K +S +S S P S
Sbjct: 709 RRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSK 768
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTG--PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLS 1198
S + S+P Q PP S S + K +S T + S
Sbjct: 769 AKS----RLSLRRSLSGSSPCPKQKSQTPPRRSRS-----GSSQPKAKSRTPPRRSRSSS 819
Query: 1199 FSPQSQNGRAPPPLSFSSSPPSP 1221
P Q + P S SSS P P
Sbjct: 820 SPPPKQKSKTPSRQSHSSSSPHP 842
Score = 38.9 bits (89), Expect = 0.031
Identities = 74/336 (22%), Positives = 113/336 (33%), Gaps = 26/336 (7%)
Query: 213 DGPGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPS----------PSRIPYGGTRSMVVPG 262
D P P G + P + P TP P S PS P R G S+
Sbjct: 1468 DIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKT 1527
Query: 263 NATIPRDRISSLPVSRPISPSPSAILERR---DVKPDEDMSGKNIAMYRNEGFYADPYLY 319
A P + S S+ + PSA + R D PD + R+ + P +
Sbjct: 1528 VARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRS-GSSPEVD 1586
Query: 320 HEGRMSIASSHGGHPLDVPDHIIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYP 379
+ R+S S G +V D A R S S+ P A + + R +S
Sbjct: 1587 SKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSS-PEPKAPAPRALPR---RSRSGSSS 1642
Query: 380 DSHLPT-LGSKTPPASPHRVSDLRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEP--- 435
P+ GS + +SP R A + P R P R++ + P
Sbjct: 1643 KGRGPSPEGSSSTESSPEHPPKSRT----ARRGSRSSPEPKTKSRTPPRRRSSRSSPELT 1698
Query: 436 GTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETRERMQAMEKQIASLTG 495
+ RSA+ PP + S K R +R R A + + +
Sbjct: 1699 RKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSR 1758
Query: 496 LVQSALFKGPITSYSKDASSEKMMKTTANRNHTDSA 531
+S K S+ S + +TT R+ + S+
Sbjct: 1759 RGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSS 1794
Score = 36.6 bits (83), Expect = 0.16
Identities = 50/251 (19%), Positives = 85/251 (33%), Gaps = 35/251 (13%)
Query: 932 GPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPP-----PPPRRSYLPGSGLTT-- 984
GP P G + E S + P + + G +S P P PP RRS LT
Sbjct: 1646 GPSPEGSS---STESSPEHPPKSRTARR-GSRSSPEPKTKSRTPPRRRSSRSSPELTRKA 1701
Query: 985 --------------TRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTP 1030
TRS R ++++ +E + S + R+ P + S
Sbjct: 1702 RLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Query: 1031 SPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSK 1090
SP P + E + S + TSR +++R + G
Sbjct: 1762 SPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYH 1821
Query: 1091 LQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPP 1150
+ P + + S+++ G S+ P S +S + P+ S + +P
Sbjct: 1822 SRSPARQESSRTSSRRRRG----------RSRTPPTSRKRSRSRTSPAPWKRSRSRASPA 1871
Query: 1151 ATKPSIASNPL 1161
+ S + PL
Sbjct: 1872 THRRSRSRTPL 1882
Score = 36.2 bits (82), Expect = 0.20
Identities = 72/310 (23%), Positives = 110/310 (35%), Gaps = 38/310 (12%)
Query: 928 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRS 987
PP P R +P KV+ + SP G S P P R+ T RS
Sbjct: 904 PPRQSP-SRSSSPQPKVK-AIISPRQRSH----SGSSSPSPSRVTSRT-------TPRRS 950
Query: 988 GDVVYTGRKENITAKASSEDAGPSPQTRATKY--PAEEPASAWTP-------SPPPVTTS 1038
V E+ S SP T+ P + + + +P +PP + S
Sbjct: 951 RSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLS 1010
Query: 1039 SSKDEEEEEEEGDKIMAELQGSSG--APQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQ 1096
SK +E+ D ++ GS A S P P + +L G+ D R
Sbjct: 1011 GSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTP-PGESYFGVSSLQLKGQSQTSPDHRS 1069
Query: 1097 YRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLP-----NPPA 1151
++ ++S + SPSL + SP G+S S + +S P +
Sbjct: 1070 -DTSSPEVRQSHSE----SPSLQSKS--QTSPKGGRSRSSSPVTELASRSPIRQDRGEFS 1122
Query: 1152 TKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPP 1211
P + S +SP+ +S P+V + SL QS T + P ++ A PP
Sbjct: 1123 ASPMLKSG-MSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPP 1181
Query: 1212 LSFSSSPPSP 1221
P P
Sbjct: 1182 RQKDKFSPFP 1191
Score = 33.9 bits (76), Expect = 1.0
Identities = 69/310 (22%), Positives = 109/310 (35%), Gaps = 31/310 (10%)
Query: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYT----GRKENITAKASSE-------DAG 1009
G +S PP RR GS +RS T G + A SS
Sbjct: 2064 GKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMS 2123
Query: 1010 PSPQTRATKYPAEEP-ASAWTP-------------SPPPVTTSSSKDEEEEEEEGDKIMA 1055
P+P R EP S+ TP P P + E +I
Sbjct: 2124 PTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIAL 2183
Query: 1056 ELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTS 1115
L S T+R P MSA + + L R AN +++ +
Sbjct: 2184 ALTAISLG--TARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAAS--AAA 2239
Query: 1116 PSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLI 1175
+L +++ PA+ + + S ++ + NL +P A N P+T P A + +L
Sbjct: 2240 MNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRT-PTAPAVNLA 2298
Query: 1176 PSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLN-QGAKGT 1234
+ + +L SLT +G + P S P + P S ++ +N G++
Sbjct: 2299 GARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTA 2358
Query: 1235 RTIHTPSLTS 1244
+ SLTS
Sbjct: 2359 AALAPASLTS 2368
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 64.3 bits (155), Expect = 7e-10
Identities = 104/477 (21%), Positives = 162/477 (33%), Gaps = 61/477 (12%)
Query: 840 PQEATSTLQMS--QAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQ 897
P A+ T++ + ++P+ P ++S I E HSVS + S + R+
Sbjct: 81 PSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRK 140
Query: 898 NLDHYNG---KEFEKLLE--EAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSED 949
N +E +K L+ + + N K P + P A L GD V + S
Sbjct: 141 IKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTT 200
Query: 950 SPNSEQDLEKLGGKSP--PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRK 996
N K+ P P P PP + LT TT + T K
Sbjct: 201 QHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 260
Query: 997 ENITA--------KASSEDAGPSPQTRA---------TKYPA------------EEPASA 1027
E T+ K S++D P+ + A TK PA +EPAS
Sbjct: 261 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 320
Query: 1028 WTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPG 1086
P P T S+ +E A AP T++ P P + K P T +P
Sbjct: 321 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 380
Query: 1087 KQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNL 1146
+ P ++ + K PT+P PA P + P++ +
Sbjct: 381 PTTTKSAPTTPKEPAPTTPKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Query: 1147 PNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNG 1206
P PA P +P+ P P+ + K S T + +
Sbjct: 438 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTT 493
Query: 1207 RAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1262
+ P P + S+P +P T P+ T+ K ++ K P+T KE
Sbjct: 494 KEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 550
Score = 55.8 bits (133), Expect = 2e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 967
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 323 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 377
Query: 968 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1021
P P +S P TT T ++ T P TK PA
Sbjct: 378 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Query: 1022 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 438 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 491
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 492 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ P P TK + P P P +A P + LT T +
Sbjct: 549 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 595
Query: 1201 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1255
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 596 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655
Query: 1256 TPSTAKETS 1264
P+T KET+
Sbjct: 656 APTTPKETA 664
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 971
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 550 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 602
Query: 972 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1025
P TT T KA++ + P K PA +EPA
Sbjct: 603 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 658
Query: 1026 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+ TP TT ++ K +A T P P + K
Sbjct: 659 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 718
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 719 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 773
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
D P T P+ P PA + P + + + T H S
Sbjct: 774 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 833
Query: 1201 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1259
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 834 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 882
Query: 1260 AKET 1263
+ T
Sbjct: 883 LRTT 886
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 826 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 885
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 623 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 675
Query: 886 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 944
K K+ KE + + P P T P P+ AP
Sbjct: 676 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 730
Query: 945 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1002
E + +P K + P P P + G T+T S T KE
Sbjct: 731 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 790
Query: 1003 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
A + P+P T T P S T + P T S DE E + L+
Sbjct: 791 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 850
Query: 1060 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1119
S P P + K T K ++ +D R + +A K + T+
Sbjct: 851 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 908
Query: 1120 ASKIPA 1125
SKI A
Sbjct: 909 ESKITA 914
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 64.3 bits (155), Expect = 7e-10
Identities = 104/477 (21%), Positives = 162/477 (33%), Gaps = 61/477 (12%)
Query: 840 PQEATSTLQMS--QAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQ 897
P A+ T++ + ++P+ P ++S I E HSVS + S + R+
Sbjct: 122 PSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRK 181
Query: 898 NLDHYNG---KEFEKLLE--EAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSED 949
N +E +K L+ + + N K P + P A L GD V + S
Sbjct: 182 IKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTT 241
Query: 950 SPNSEQDLEKLGGKSP--PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRK 996
N K+ P P P PP + LT TT + T K
Sbjct: 242 QHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 301
Query: 997 ENITA--------KASSEDAGPSPQTRA---------TKYPA------------EEPASA 1027
E T+ K S++D P+ + A TK PA +EPAS
Sbjct: 302 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 361
Query: 1028 WTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPG 1086
P P T S+ +E A AP T++ P P + K P T +P
Sbjct: 362 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 421
Query: 1087 KQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNL 1146
+ P ++ + K PT+P PA P + P++ +
Sbjct: 422 PTTTKSAPTTPKEPAPTTPKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Query: 1147 PNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNG 1206
P PA P +P+ P P+ + K S T + +
Sbjct: 479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTT 534
Query: 1207 RAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1262
+ P P + S+P +P T P+ T+ K ++ K P+T KE
Sbjct: 535 KEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 591
Score = 55.8 bits (133), Expect = 2e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 967
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 364 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 418
Query: 968 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1021
P P +S P TT T ++ T P TK PA
Sbjct: 419 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Query: 1022 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 479 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 532
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 533 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ P P TK + P P P +A P + LT T +
Sbjct: 590 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 636
Query: 1201 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1255
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 637 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696
Query: 1256 TPSTAKETS 1264
P+T KET+
Sbjct: 697 APTTPKETA 705
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 971
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 591 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 643
Query: 972 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1025
P TT T KA++ + P K PA +EPA
Sbjct: 644 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 699
Query: 1026 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+ TP TT ++ K +A T P P + K
Sbjct: 700 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 759
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 760 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 814
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
D P T P+ P PA + P + + + T H S
Sbjct: 815 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 874
Query: 1201 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1259
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 875 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 923
Query: 1260 AKET 1263
+ T
Sbjct: 924 LRTT 927
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 826 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 885
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 664 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 716
Query: 886 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 944
K K+ KE + + P P T P P+ AP
Sbjct: 717 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 771
Query: 945 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1002
E + +P K + P P P + G T+T S T KE
Sbjct: 772 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 831
Query: 1003 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
A + P+P T T P S T + P T S DE E + L+
Sbjct: 832 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 891
Query: 1060 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1119
S P P + K T K ++ +D R + +A K + T+
Sbjct: 892 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 949
Query: 1120 ASKIPA 1125
SKI A
Sbjct: 950 ESKITA 955
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 61.6 bits (148), Expect = 5e-09
Identities = 103/476 (21%), Positives = 163/476 (34%), Gaps = 65/476 (13%)
Query: 840 PQEATSTLQMSQAPQ----SPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEK 895
P+ T + S AP+ +P++P ++ ++E S S + + K E E K
Sbjct: 201 PRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSD---ILKVPKPEPIPEPK 257
Query: 896 RQNLDHYNGKEFEKLLEEAQANIM---KSIPNLEMPPATGPLPRGDAPVDKVE-LSEDSP 951
+ + + KE EK ++ +S P T P R + SP
Sbjct: 258 EPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSP 317
Query: 952 NSEQDLEKLGGKSPP---PPPPPPRRSYLP-----GSGLTTTRSGDVVYTGRKENITAKA 1003
+ ++PP PPPP RRS P S + + S + R + K
Sbjct: 318 RRRPSPRR---RTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374
Query: 1004 SSEDAGPSPQTRATKYPAEEPASAWTPSPP----PVTTSSSKDEEEEEEEGDKI------ 1053
+ P +TR A P PSPP P T S ++ ++
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGR 434
Query: 1054 ----MAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS---KLQDPRQYRQANGSAKK 1106
+ + +G+ S P P + DK GK + +Q RQYR+ N +
Sbjct: 435 TSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSS 494
Query: 1107 SGGDFKPTSPSLPA---------------SKIPALSPSSGKSSSLPSSSGDSSNLPNPPA 1151
G + P S + SPS K S G P+PP
Sbjct: 495 DSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPP 554
Query: 1152 TKPSIASNPLSP------QTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN 1205
T+ + +P P T PP P + + + S P+ +
Sbjct: 555 TRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRT 614
Query: 1206 GRAPPPLSFSSSP-PSPASSVSLN----QGAKGTRTIHTPSLTSYKAQNGSSSKAT 1256
PPP +SP P P VS + Q + +PSL+S + S S++T
Sbjct: 615 ASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST 670
Score = 48.1 bits (113), Expect = 5e-05
Identities = 66/295 (22%), Positives = 100/295 (33%), Gaps = 23/295 (7%)
Query: 893 EEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPN 952
E++R H E + + + P + R +P SP+
Sbjct: 503 EDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS 562
Query: 953 SEQDLEKLGGKSPPP----PPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDA 1008
+ +PPP P PPPRR + R + + K +
Sbjct: 563 PAPPPRRRRTPTPPPRRRTPSPPPRRR-----SPSPRRYSPPIQRRYSPSPPPKRRTASP 617
Query: 1009 GPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSR 1068
P P+ RA+ P+ P + SPPP SS + K +GSS + T
Sbjct: 618 PPPPKRRAS--PSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSK---HRKGSSPSRSTRE 672
Query: 1069 MPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIP---- 1124
P K + Q+ P R A+ S ++ T P S+ P
Sbjct: 673 ARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKK 732
Query: 1125 ---ALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIP 1176
A SPS +S SSS S P P A KP +P+ Q+ P + + +P
Sbjct: 733 IKKAASPSP-QSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQS-PSTNWSPAVP 785
Score = 45.4 bits (106), Expect = 3e-04
Identities = 74/347 (21%), Positives = 119/347 (34%), Gaps = 39/347 (11%)
Query: 939 APVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTG---- 994
A D V+ Q G S P+RS++ + R +
Sbjct: 474 AAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSP 533
Query: 995 -RKENITAKASSEDAGPSP---QTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEG 1050
+++ T+ PSP + R + PA P TP+PPP + S
Sbjct: 534 RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593
Query: 1051 DKIMAELQG--SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSG 1108
+ +Q S P R P R + P K+ P ++++ K+
Sbjct: 594 RRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRR- 652
Query: 1109 GDFKPTSPSLPASKIPALSPS-SGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSP-QTG 1166
SPSL + SPS S + + P + S P P A + S + P+ +
Sbjct: 653 ------SPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS 706
Query: 1167 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN-----------GRAPPPLSFS 1215
P S PS S ++ S T K + SP Q+ G P
Sbjct: 707 SPQRRQS--PSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 1216 SSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKE 1262
+PPSP S S T +P++ KA++ + S + P + +
Sbjct: 765 PAPPSPVQSQS-------PSTNWSPAVPVKKAKSPTPSPSPPRNSDQ 804
Score = 42.0 bits (97), Expect = 0.004
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 920 KSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPG 979
+S+ P A P AP V+ S N + KSP P P PPR S G
Sbjct: 751 RSVSGSPEPAAKKP----PAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEG 806
Query: 980 SGLTTTRSGDVVY----------TGRKENITAKASSEDAGPSPQTRATKYPA-EEPASAW 1028
G + D + +KE A A++ P+ AT A EEP +A
Sbjct: 807 GGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAA- 865
Query: 1029 TPSPPPVTTSSSKD--EEEEEEEGDKIMAELQGSSGAPQT 1066
P P T S ++D ++ E+ +K + ++ + +PQ+
Sbjct: 866 -PEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPQS 904
Score = 40.8 bits (94), Expect = 0.008
Identities = 87/414 (21%), Positives = 143/414 (34%), Gaps = 42/414 (10%)
Query: 861 NGSAMQSLFIEEIHSVSAKNRAVSIEK--AEKKWEEKRQNLDHYNGKEFEKLLEEAQANI 918
N + + S F+E + K R + EK + KK +E + D + + E +++
Sbjct: 115 NIAGIPSAFLE-LKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPR 173
Query: 919 MKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPP-------PP 971
+ + P PR + + E S + K SP P P
Sbjct: 174 RRK--------SRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPE 225
Query: 972 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPAS--AWT 1029
P S T + D++ + E I E PSP+ + K +E + +
Sbjct: 226 PSVKVKEPSVQEATSTSDILKVPKPEPIP-----EPKEPSPEKNSKKEKEKEKTRPRSRS 280
Query: 1030 PSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS 1089
S T S + + P R P P + P + P +
Sbjct: 281 RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRR-RTPPRRMPPPPRHR 339
Query: 1090 KLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNP 1149
+ + P + R+ SA SG +S S S+ P P ++SS P + S P
Sbjct: 340 RSRSPVR-RRRRSSASLSGSS---SSSSSSRSRSPPKKPPK-RTSSPPRKTRRLS----P 390
Query: 1150 PATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAP 1209
A+ P P P T PP S P SN + K + G+ + R
Sbjct: 391 SASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRES 450
Query: 1210 PPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSL---TSYKAQNGSSSKATPSTA 1260
P S +P +S ++ KG + S+ Y+ QN SS + S++
Sbjct: 451 P----SPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSS 500
Score = 36.2 bits (82), Expect = 0.20
Identities = 68/293 (23%), Positives = 99/293 (33%), Gaps = 63/293 (21%)
Query: 19 QKYPHHASAIMGHQERLRDQTRSPKLSHSPQPPSLGDPVEHLSETSADSLEAMSEGDAPT 78
+K P S+ RL P+ H P PP+ P S PT
Sbjct: 372 KKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS---------------PT 416
Query: 79 PFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAF 138
P + +RTR S + + R+ G + G E ++ P A R + +S
Sbjct: 417 P-QQSNRTRKS-----RVSVSPGRTSGKVTKHKGTEKRESPSP-----APKPRKVELSES 465
Query: 139 PQQLTMKMLESPSVAIYIKDESRNVYYELNDVRNIQDRSLLKVYNKDP--AHAFN----- 191
+ KM + SV + R Y N + S ++ P +H N
Sbjct: 466 EEDKGGKMAAADSV------QQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGR 519
Query: 192 ---HTP-KTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNSPP-----STPVPHS 242
H+P ++ + R +++ RG +P P T P PP TP P
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR 579
Query: 243 MPPSPSRIPYGGTRSMVVPGNATIPRDRISSLPVSRPISPSPSAILERRDVKP 295
PSP P P R S P+ R SPSP +RR P
Sbjct: 580 RTPSP-------------PPRRRSPSPRRYSPPIQRRYSPSPPP--KRRTASP 617
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 58.9 bits (141), Expect = 3e-08
Identities = 54/212 (25%), Positives = 70/212 (33%), Gaps = 14/212 (6%)
Query: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP 1020
GG P PPPPP + P G G+ E + ++ GP P + P
Sbjct: 43 GGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERP 102
Query: 1021 AEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+ + +PPP K E + G+ + P P P G
Sbjct: 103 PPQGGNQSQGTPPP----PGKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQG 154
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
PGK P Q + SA+ G KP P P P GK P +
Sbjct: 155 PPPHPGKPEG--PPPQEGNKSRSARSPPG--KPQGPPQQEGNKPQGPPPPGKPQGPPPAG 210
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSA 1172
G+ PPA KP P PQ G P A
Sbjct: 211 GNPQQPQAPPAGKPQ--GPPPPPQGGRPPRPA 240
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 57.4 bits (137), Expect = 9e-08
Identities = 80/327 (24%), Positives = 118/327 (36%), Gaps = 24/327 (7%)
Query: 853 PQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQN-LDHYNGKEFEKLL 911
P P IP++ + S A + K K +E R+ K K L
Sbjct: 159 PMLPTIPLSAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPRKDSESKSSSKEL 218
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGD-APVDKVELSEDSPN-SEQDLEKLGGKS--PPP 967
E QA KS + G LP+ + AP K E E LE K PPP
Sbjct: 219 EREQA---KSSKDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPP 275
Query: 968 PPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRAT-----KYPAE 1022
PPPPPR S S T +++ ++K S G SP+T ++ K PA+
Sbjct: 276 PPPPPRAS----SKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAK 331
Query: 1023 EPAS-----AWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN 1077
+ +S S P + + EE E+ +E SS + +S +
Sbjct: 332 DKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDF 391
Query: 1078 RPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKS--SS 1135
P G + + Q +++ SG + + S++ S S SS
Sbjct: 392 EPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSS 451
Query: 1136 LPSSSGDSSNLPNPPATKPSIASNPLS 1162
LPS P PP +K S +P S
Sbjct: 452 LPSREPPPPQKPPPPNSKVSGRRSPES 478
Score = 43.5 bits (101), Expect = 0.001
Identities = 56/254 (22%), Positives = 90/254 (35%), Gaps = 21/254 (8%)
Query: 1010 PSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRM 1069
P + TK + P P PPP +SSK + + + SS
Sbjct: 254 PKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSS-------- 305
Query: 1070 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQAN---GSAKKSGGDFKPTSPSLPASKIPAL 1126
+++ PGT + S D + + + G K+ + + +L + +
Sbjct: 306 ---KGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSE 362
Query: 1127 SPSSGKSSSL---PSSSGDSSNLPNPPATKPSI--ASNPLSPQTGPPAHSASLIPSVSNG 1181
+S KS S PS+S SS+ + +PS + PL S S+G
Sbjct: 363 DEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSG 422
Query: 1182 SLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPS 1241
+ T+ G+ LSFS + A L S PP P N G R+ + S
Sbjct: 423 E-EAAGKTNPGRDSRLSFSDSESDNSADSSLP-SREPPPPQKPPPPNSKVSGRRSPESCS 480
Query: 1242 LTSYKAQNGSSSKA 1255
+ G+ KA
Sbjct: 481 KPEKILKKGTYDKA 494
Score = 32.7 bits (73), Expect = 2.3
Identities = 46/215 (21%), Positives = 79/215 (36%), Gaps = 7/215 (3%)
Query: 338 PDHIIAYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHR 397
P + HR R S + S + E +S + SRK + LP PP + +
Sbjct: 194 PHKVTKEHRERPRKDSESKSSSKELEREQAKSS-KDTSRKLGEGRLPKEEKAPPPKAAFK 252
Query: 398 VSDLRMIDMHAHYNAHG---PPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLV 454
+ + + + PP P RAS R A P +K S+ G S
Sbjct: 253 EPKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAP 312
Query: 455 DLGPPLMEKQVFAYSTATIPKDRETRERMQA-MEKQIASLTGLVQSALFKGPITSYSKDA 513
P F+ K E+++A E + A V+ + + + S+ A
Sbjct: 313 GTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESA 372
Query: 514 SSEKMMKTTANRNHTDSAGTP--HVSGGKMLSALE 546
S ++++ + +DS P + S G + S +E
Sbjct: 373 QSSPSNSSSSSDSSSDSDFEPSQNHSQGPLRSMVE 407
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 57.4 bits (137), Expect = 9e-08
Identities = 70/303 (23%), Positives = 109/303 (35%), Gaps = 23/303 (7%)
Query: 928 PPATGPLPRGDA-PVDKVELSEDSPNSEQDLEKLGG----KSPPPPPPPPRRSYLPGSGL 982
P + PLP P + E + P + +KLG +SP P P P PGS +
Sbjct: 105 PVKSPPLPEHQKIPCNSAE-PKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVV 163
Query: 983 TTTRSGDVVYT--GRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSS 1040
+ + + ++++ + + P+ EP SP V + S
Sbjct: 164 SPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLS 223
Query: 1041 KDEEEEEEEGDKIMAELQGSSG-APQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQ 1099
+ +++ + + SS +P + P P P + K ++ P +
Sbjct: 224 NPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPS--PAASPESRKSARTTSPEPRKP 281
Query: 1100 ANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASN 1159
+ + + F SP P PA+SP S K P G P P + PS +S
Sbjct: 282 SPSESPEPWKPFPAVSPE-PRRPAPAVSPGSWK----PGPPGS----PRPWKSNPSASSG 332
Query: 1160 PLSPQTGPPAHSASL---IPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSS 1216
P P P+ S IPSVS G K + S SP S P S+ S
Sbjct: 333 PWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKS 392
Query: 1217 SPP 1219
PP
Sbjct: 393 GPP 395
Score = 49.7 bits (117), Expect = 2e-05
Identities = 84/332 (25%), Positives = 116/332 (34%), Gaps = 62/332 (18%)
Query: 949 DSPNSEQDLEKLGGKSPPPPPPPP------RRSYLPGSGLTTTRSGDVVYTGRKENITAK 1002
D P ++ + E KSPP P +P + T + G V+
Sbjct: 93 DKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVL----------- 141
Query: 1003 ASSEDAGPSPQTRATKYPAEEPASAWTPS--PPPVTTSSSKDEEEEEEEGDKIMAELQGS 1060
S E P+P T ++P S +P P + SK E K + +
Sbjct: 142 -SPESPKPTP---LTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQ 197
Query: 1061 SGAPQTS---RMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPS 1117
AP S + P P+S ++ TL P Q + P + S+ P SP
Sbjct: 198 KLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS--------PESPV 249
Query: 1118 LPAS-----KIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSA 1172
L AS PA SP S KS+ S P P PS + P P
Sbjct: 250 LAASPEPWGPSPAASPESRKSARTTS--------PEPRKPSPSESPEPWKPFPAVSPEPR 301
Query: 1173 SLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNG---RAPPPLSFSSSPPSPASSVSLNQ 1229
P+VS GS K G +P + +G A P S S P P SVS
Sbjct: 302 RPAPAVSPGSWK---PGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Query: 1230 GAKGTRTIHTPSLTSYKAQNGSSSKATPSTAK 1261
TPS++S + SS +PS+ K
Sbjct: 359 WKP------TPSVSS---ASWKSSSVSPSSWK 381
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 9e-08
Identities = 94/358 (26%), Positives = 121/358 (33%), Gaps = 54/358 (15%)
Query: 928 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---PPPPPRRSYLPGSGLTT 984
P AT P P+G + + +P + K G +PPP P P P GL T
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 985 TRSGDVVYTGRKENITAKASSEDAGP--SPQTRATKYPAEEPASAWTPSPPPVTTSSSKD 1042
T + K P +P T A P+ + A TPSP T+ +
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLA-TPSPKGAPTTPA-- 1245
Query: 1043 EEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANG 1102
A G P T P P A P P + L P N
Sbjct: 1246 ------------ATPPSPKGGPAT---PPPKGAPTPPAA-TPPSLKGGLATPPHKGAPNP 1289
Query: 1103 SA----KKSGGDFKPTSPSLPASKIPALSPSSGKSS-SLPSSSGDSSNLPNPPA-TKPSI 1156
+ GG TSP A PA +P S K S P G P PPA T PS
Sbjct: 1290 AVVTPPSPKGG--PATSPPKGAPTPPAATPPSPKGSPGTPPPKG----APTPPAVTPPSP 1343
Query: 1157 ASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPP------ 1210
P P T P + PS G + T + KG P + G A P
Sbjct: 1344 KGTPTLPATTPSSKGGPTTPSSKEGPTP-PAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Query: 1211 ------PLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSY---KAQNGSSSKATPST 1259
PLS +P +P + +KG T P++T KA S+ K P+T
Sbjct: 1403 TSPAVIPLSPKKAPATPVTREGAATPSKGDLT--PPAVTPVSLKKAPATSAPKGGPAT 1458
Score = 56.2 bits (134), Expect = 2e-07
Identities = 120/496 (24%), Positives = 183/496 (36%), Gaps = 81/496 (16%)
Query: 827 AQNLPHVASSPAVPQEATSTL----QMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRA 882
++N P VA SP +TL ++ ++ SP +P G+ + ++ I SA
Sbjct: 705 SENCP-VAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPV 763
Query: 883 VSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPP----ATGP-LPRG 937
S K E E+ + + L + + P + PP + GP P G
Sbjct: 764 ASSPK-ECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIG 822
Query: 938 D--APVDKVELSEDSPNSEQDLEKLGGKSPP-----PPPPPPRRSYLPGSGLTTTRSGDV 990
+ +PV VE S NS L G K P P PP P+ + P + T S
Sbjct: 823 NLSSPVSPVEASFLPENS---LSFQGSKDSPATTHSPTPPSPKGAPTPSA--VTPLSPKG 877
Query: 991 VYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEG 1050
V KE P+P +P E PA+ P ++ +SS ++
Sbjct: 878 VTLPPKET-----------PTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPA 926
Query: 1051 DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLD-KPGKQSKLQDPRQYRQANGSAKKSGG 1109
K + GAP T P S K P T K P + + G
Sbjct: 927 PKGIPASPSPKGAP-TPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGA 985
Query: 1110 DFKPTS--------PSLPASK----IPALSPSSGKSSSLPSSSGDSSNLP---NPPATKP 1154
P + P+ P+ K PA++P S K S + ++ P PP+ K
Sbjct: 986 PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKG 1045
Query: 1155 SIASNPL-------------SPQTGPPAHS---ASLIPSVSNGSLKFQSLTHTGKGHHL- 1197
S A+ PL SP+ GP S A P+ + S K T + KG +
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP 1105
Query: 1198 --SFSPQSQNGRAPP-----PLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNG 1250
+ P + G A P P + +++PPSP ++ KG T TP+ T + G
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLA-TPPPKGAPT--TPAATPPSPKGG 1162
Query: 1251 SSS---KATPSTAKET 1263
++ K P+T T
Sbjct: 1163 LATPPPKGAPTTPAAT 1178
Score = 53.9 bits (128), Expect = 9e-07
Identities = 93/385 (24%), Positives = 130/385 (33%), Gaps = 65/385 (16%)
Query: 928 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---PPPPPRRSYLPGSGLTT 984
P AT P P+G + + +P + K G +PPP P PP GL T
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLAT 1280
Query: 985 TRSGDVVYTGRKENITAKASSEDAGP--SPQTRATKYPAEEPASA----------WTPSP 1032
+ G S GP SP A PA P S P+P
Sbjct: 1281 PP-----HKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335
Query: 1033 P-------------PVTTSSSKD--EEEEEEEGDKIMAELQGSSGAPQTS--------RM 1069
P P TT SSK +EG A G P + +
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI 1395
Query: 1070 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTS---------PSLPA 1120
P P P + K++ P G+A S GD P + P+ A
Sbjct: 1396 PSPKGDPTSPAVIPLSPKKA----PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSA 1451
Query: 1121 SKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP-SIASNPLSPQTGPPAHSASLIPSVS 1179
K +PSS +LP+ + S PPA K + +S+P P A +P+V
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPK--EPPAPKQVATSSSPKKAPATPAPMGAPTLPAVI 1509
Query: 1180 NGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHT 1239
S K T + + ++ + + + P L+ + PA +V K T I T
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTV---PSPKKTPAIPT 1566
Query: 1240 PS---LTSYKAQNGSSSKATPSTAK 1261
P T + S TPST K
Sbjct: 1567 PKEAPATPSSKEASSPPAVTPSTYK 1591
Score = 50.4 bits (119), Expect = 1e-05
Identities = 88/362 (24%), Positives = 127/362 (35%), Gaps = 48/362 (13%)
Query: 928 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---PPPPPRRSYLPGSGLTT 984
P AT P P+G + + +P + K G +P P P P P GL T
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1211
Query: 985 TRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEE 1044
T + K A PSP+ T A P+ P+ PP + +
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGL--ATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAA 1269
Query: 1045 EEEEEGDKIMAELQGSSGAPQTSRMP-----VPMSAKNRPGTLDKPGKQSK-LQDPRQYR 1098
L+G P P P S K P T G + P +
Sbjct: 1270 TPPS--------LKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK 1321
Query: 1099 QANGSAKKSGGDFKPTSPSL--PASK----IPALSPSSGKSSSLPSSSGDSSNLPNPPAT 1152
+ G+ G PT P++ P+ K +PA +PSS + PSS P PPA
Sbjct: 1322 GSPGTPPPKGA---PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG----PTPPAA 1374
Query: 1153 KPSI----ASNPLSPQTGPPAHSASLIPS----VSNGSLKFQSLTHTGKGHHLSFSPQSQ 1204
PS A P SP+ GP S P+ + K + T +G + S+
Sbjct: 1375 TPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREG----AATPSK 1430
Query: 1205 NGRAPPPLSFSSSPPSPASSV----SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTA 1260
PP ++ S +PA+S +KG T+ + S K AT S+
Sbjct: 1431 GDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP 1490
Query: 1261 KE 1262
K+
Sbjct: 1491 KK 1492
Score = 49.7 bits (117), Expect = 2e-05
Identities = 119/547 (21%), Positives = 189/547 (34%), Gaps = 93/547 (17%)
Query: 747 KGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVVP---LSGMM 803
KG A ++++KA A K + G P P K P +
Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSS 1489
Query: 804 VRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQS--PQIPMN 861
+ A ++P + + + + +P SS P T+TL + P + P+ +
Sbjct: 1490 PKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALI 1549
Query: 862 GSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLL---------- 911
AM ++ ++ A + +++ Y G K L
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Query: 912 -EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELS--EDSPNSEQDLE-KLGGKSPPP 967
+EA + P+ E PAT P P+G V S +DSP S + K+G P
Sbjct: 1610 PKEAPTPPAVTPPSPEKGPAT-PAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQA 1668
Query: 968 PPPPPRRSYLPGSGLTTTR---------SGDVVYTGRKENITAKASSEDAGPSPQTRATK 1018
P + G T + S ++ ++ K SS + P + K
Sbjct: 1669 SKGLPAKK-----GPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAK 1723
Query: 1019 YPAEEPASAWTPSPP-PVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN 1077
++ P S P+P PV SSK + ++ + AP S+ P++A
Sbjct: 1724 NGSKGPLSTVAPAPLLPVQKDSSKTAKGKDA------SHSPKGPLAPPESKASTPLTAAA 1777
Query: 1078 RPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLP 1137
L KP SA S P S L S +P L P K LP
Sbjct: 1778 FEKVLPKPE----------------SASVSAAPSPPVSLPLAPSPVPTLPP---KQQFLP 1818
Query: 1138 SSSG---DSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1194
SS G +S + P PA + + PL P P +G + FQS+
Sbjct: 1819 SSPGLVLESPSKPLAPADEDELL--PLIP------------PEPISGGVPFQSV------ 1858
Query: 1195 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK 1254
L P ++ P P PS V+ N GT + S+ + Q+ S++
Sbjct: 1859 --LVNMPTPKSAGIPVP------TPSAKQPVTKNNKGSGTESDSDESVPELEEQD--STQ 1908
Query: 1255 ATPSTAK 1261
AT A+
Sbjct: 1909 ATTQQAQ 1915
Score = 37.4 bits (85), Expect = 0.091
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 215 PGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYG--GTRSMVVPGNATIPRD 269
P +P P PP A P SP P+TP P P P+ P G + P A P
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPA 990
Query: 270 RISSLPVSRPISPSP 284
P P +PSP
Sbjct: 991 ATPPSPKGGPATPSP 1005
Score = 37.4 bits (85), Expect = 0.091
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 214 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 270
GP P P PP A P SP P+TP P P P+ P S P P+
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS---PAATPFPKG- 1031
Query: 271 ISSLPVSRPISP--SPSA 286
S+ P + P SP SP+A
Sbjct: 1032 ASTPPAATPPSPKGSPAA 1049
Score = 37.0 bits (84), Expect = 0.12
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 211 RGDGPGAPRPGSTAHPPHAIP----NSPPSTPVPHSMPPSPSRI---PYGGTRSMVVPGN 263
+G P P + PP A P SP +TP+P P +P+ P GG + + G
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Query: 264 ATIPRDRISSLPVSRPISPSP 284
T P S P P +PSP
Sbjct: 1080 PTPPAATPPS-PKGGPATPSP 1099
Score = 34.7 bits (78), Expect = 0.59
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 214 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 270
GP P P PP A P SP P+TP P P P+ P P P
Sbjct: 953 GPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAP--- 1009
Query: 271 ISSLPVSRPISP--SPSA 286
+ P P SP SP+A
Sbjct: 1010 --TPPAVTPPSPKGSPAA 1025
Score = 34.3 bits (77), Expect = 0.77
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 214 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 270
GP P PP A P SP P+TP P P P+ P G AT P
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP-----PSPKGGLATPPHKG 1124
Query: 271 ISSLPVSRPISP 282
+ P + P SP
Sbjct: 1125 APTTPAATPPSP 1136
Score = 34.3 bits (77), Expect = 0.77
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 214 GPGAPRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 270
GP P PP A P SP P TP P P P+ P + +P AT P +
Sbjct: 1300 GPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP--ATTPSSK 1357
Query: 271 ISSLPVSRPISPSPSA 286
S P+P A
Sbjct: 1358 GGPTTPSSKEGPTPPA 1373
Score = 32.3 bits (72), Expect = 2.9
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 15/81 (18%)
Query: 214 GPGAPRPGSTAHPPHAIPNSPPSTPV-----------PHSMPPSPSRIPYGGTRSMVVPG 262
GP P P PP P SP +P P + PPSP P + + G
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSP---AATPLPKG 1055
Query: 263 NATIPRDRISSLPVSRPISPS 283
T P + S P P +PS
Sbjct: 1056 APTTPAATLPS-PKGGPATPS 1075
Score = 32.3 bits (72), Expect = 2.9
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 216 GAPRPGSTAHPPHAIPNSPPSTPVPHSM-PPSPSRIPYGGTRSMVVPGNATIPRDRISSL 274
GAP P PP SP P P ++ PPSP + G + G T P SSL
Sbjct: 1592 GAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK----GPATPAPKGTPTSPPVTPSSL 1647
Query: 275 PVSRPISPS 283
S P SP+
Sbjct: 1648 KDS-PTSPA 1655
Score = 32.0 bits (71), Expect = 3.8
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 214 GPGAPRPGSTAHPPHAIPNSPP---STPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDR 270
GP P P PP A P SP +TP P +P+ P G AT P
Sbjct: 1093 GPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP-----PSPKGGLATPPPKG 1147
Query: 271 ISSLPVSRPISP 282
+ P + P SP
Sbjct: 1148 APTTPAATPPSP 1159
Score = 32.0 bits (71), Expect = 3.8
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 13/80 (16%)
Query: 215 PGAPRPGSTAHPPHAIPNSPPSTP---------VPHSMPPSPSRIPYGGTRSMVVPGNAT 265
P +P+ G PP P P +TP PH P+P+ + T G AT
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVV----TPPSPKGGPAT 1303
Query: 266 IPRDRISSLPVSRPISPSPS 285
P + P + P SP S
Sbjct: 1304 SPPKGAPTPPAATPPSPKGS 1323
Score = 32.0 bits (71), Expect = 3.8
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 217 APRPGSTAHPPHAIPNSP---PSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRD-RIS 272
+P P PP P SP P+TP P P SP P S P + T +
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666
Query: 273 SLPVSRPISPSPSAILE 289
P P+A+ E
Sbjct: 1667 QASKGLPAKKGPTALKE 1683
Score = 30.8 bits (68), Expect = 8.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 215 PGAPRPGSTAHPPHAIPNSPPSTPV-----PHSMPPSPSRIPYGGTRSMVVPGNATIPRD 269
P +P+ G P P +P +TP P + PP + P T + G AT P
Sbjct: 1225 PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHK 1284
Query: 270 RISSLPVSRPISP 282
+ V P SP
Sbjct: 1285 GAPNPAVVTPPSP 1297
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 57.0 bits (136), Expect = 1e-07
Identities = 117/519 (22%), Positives = 170/519 (32%), Gaps = 94/519 (18%)
Query: 774 EAAHTSGQ--PFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLP 831
E +SG+ P ++ + D+K+E V S V+ SSP+ Q
Sbjct: 50 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE----------- 98
Query: 832 HVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKK 891
VAS +S +Q P P G S+ +R+V+ E
Sbjct: 99 KVASDTEEADRTSSKKTKTQEISRPNSPSEG-----------EGESSDSRSVNDE----- 142
Query: 892 WEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSP 951
G K +++ + SIP+ + + D+ + L P
Sbjct: 143 ------------GSSDPKDIDQDNRSTSPSIPSPQDNESD-----SDSSAQQQMLQAQPP 185
Query: 952 NSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1011
L+ G +P P PP LP G T + + + P
Sbjct: 186 ----ALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV 241
Query: 1012 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-SRMP 1070
P T + PA P +P PPP + + L GS+G P S
Sbjct: 242 PHTHIQQAPALHPQRPPSPHPPPHPSPHPP------------LQPLTGSAGQPSAPSHAQ 289
Query: 1071 VPMSAKNRPG--------TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP-TSPSLPAS 1121
P+ + PG L PG P Q Q S P TS LPAS
Sbjct: 290 PPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS 349
Query: 1122 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATK----PSIASNPLSPQTGPP---AHSASL 1174
+ S + LP + ++ PP T P+ ++ P P + +A+L
Sbjct: 350 QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANL 409
Query: 1175 IPSVSNGSLKFQSLTHTGKGH--HLSFSPQSQ----NGRAPPPLSFSSS-PPSPAS--SV 1225
P + L S H H L PQSQ + PP L+ S + PP PAS
Sbjct: 410 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 469
Query: 1226 SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1264
L+Q A P + G TP T TS
Sbjct: 470 GLHQVAP------QPPFAQHPFVPGGPPPITPPTCPSTS 502
Score = 39.3 bits (90), Expect = 0.024
Identities = 108/523 (20%), Positives = 171/523 (32%), Gaps = 73/523 (13%)
Query: 56 PVEHLSETSADSLEAMSEG-DAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDE 114
P TS + + S G ++P+ S S + V +S + KE + L
Sbjct: 38 PASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPL------- 90
Query: 115 TKQLRMPNEITSADTIRALFVSAFPQQLT-MKMLESPSVAIYIKDESRNVYYELNDVRNI 173
K + E ++DT A S+ + + SPS +SR+V E +
Sbjct: 91 -KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 149
Query: 174 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 233
D+ P+ N + + D Q++++ A+ P P P + P
Sbjct: 150 IDQDNRSTSPSIPSPQDNES----DSDSSAQQQMLQAQP--PALQAPTGVTPAPSSAPPG 203
Query: 234 PPSTPVPHSMPPSPSRIPYGGTRSMVVPG-----NATIPRDRISSLPVSRP-ISPSPSAI 287
P P P P + + P G + P A +P I P P PSP
Sbjct: 204 TPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP 263
Query: 288 LERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGG---------HPLDVP 338
P + ++G A + +A P L+ +G S G P +P
Sbjct: 264 PHPSPHPPLQPLTGS--AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 321
Query: 339 DHIIAYHRTAIRS-ASAYCNPSMQ--AEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASP 395
S A+AY + S+Q A QS + + P + L K PP +P
Sbjct: 322 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 381
Query: 396 HRVSDLRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVD 455
+ L H H PPH P S + + P + LSSL
Sbjct: 382 --IPQLPAPQAHKH-----PPHLSGPSPFSMNAN-----------LPPPPALKPLSSLST 423
Query: 456 LGPPLMEKQVFAYSTATIPKDRETRERMQAMEKQIASLTGLVQSALFKGPITSYSKDASS 515
PP + P + + Q + A GL QS P S+
Sbjct: 424 HHPP-----------SAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLH 472
Query: 516 EKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVG 558
+ + ++ G P ++ T P + PP G
Sbjct: 473 QVAPQPPFAQHPFVPGGPPPIT--------PPTCPSTSTPPAG 507
Score = 37.4 bits (85), Expect = 0.091
Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 11/202 (5%)
Query: 981 GLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSS 1040
G T+ + D+ +GR A SS D+ ++ K EE +S + +S
Sbjct: 43 GRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVAS 102
Query: 1041 KDEEEEEEEGDKIMAELQGSSGAPQ------TSRMPVPMSAKNRPGTLDKPGKQSKLQDP 1094
EE + K + +P + V + P +D+ + + P
Sbjct: 103 DTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIP 162
Query: 1095 RQY---RQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA 1151
++ SA++ +P + P PA S + + LP+ S PP
Sbjct: 163 SPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQ 222
Query: 1152 TKPSIASNPLSPQ--TGPPAHS 1171
P+ + P PQ T P H+
Sbjct: 223 GSPTASQAPNQPQAPTAPVPHT 244
Score = 33.5 bits (75), Expect = 1.3
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 30/269 (11%)
Query: 923 PNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS-- 980
P L++ P + PLP A + S++ P G P PP + ++PG
Sbjct: 432 PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 491
Query: 981 --------GLTTTRSGDVVYTGRKENITAKASSEDAG----PSPQTRATKYPAEEPASAW 1028
+T +G + A + AG P P + + ++
Sbjct: 492 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 551
Query: 1029 TPSPPPVTTSSSK---DEEEEEEEGDKIMAEL-QGSSGAPQTSRMPVPMS----AKNRPG 1080
+P PPP + S D + + L +G + +T +P++ AK R
Sbjct: 552 SPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREE 611
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
++K ++++ Q R+ R+ +K + + + S G+ S P S
Sbjct: 612 AIEKAKREAE-QKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSD-PQLS 669
Query: 1141 GDSSNLPN--PPATKPSIASNPLSPQTGP 1167
G P+ PP T +IA+ P P GP
Sbjct: 670 GPGHMRPSFEPPPT--TIAAVP--PYIGP 694
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.0 bits (136), Expect = 1e-07
Identities = 117/519 (22%), Positives = 170/519 (32%), Gaps = 94/519 (18%)
Query: 774 EAAHTSGQ--PFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLP 831
E +SG+ P ++ + D+K+E V S V+ SSP+ Q
Sbjct: 604 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE----------- 652
Query: 832 HVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKK 891
VAS +S +Q P P G S+ +R+V+ E
Sbjct: 653 KVASDTEEADRTSSKKTKTQEISRPNSPSEG-----------EGESSDSRSVNDE----- 696
Query: 892 WEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSP 951
G K +++ + SIP+ + + D+ + L P
Sbjct: 697 ------------GSSDPKDIDQDNRSTSPSIPSPQDNESD-----SDSSAQQQMLQAQPP 739
Query: 952 NSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1011
L+ G +P P PP LP G T + + + P
Sbjct: 740 ----ALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV 795
Query: 1012 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-SRMP 1070
P T + PA P +P PPP + + L GS+G P S
Sbjct: 796 PHTHIQQAPALHPQRPPSPHPPPHPSPHPP------------LQPLTGSAGQPSAPSHAQ 843
Query: 1071 VPMSAKNRPG--------TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP-TSPSLPAS 1121
P+ + PG L PG P Q Q S P TS LPAS
Sbjct: 844 PPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS 903
Query: 1122 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATK----PSIASNPLSPQTGPP---AHSASL 1174
+ S + LP + ++ PP T P+ ++ P P + +A+L
Sbjct: 904 QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANL 963
Query: 1175 IPSVSNGSLKFQSLTHTGKGH--HLSFSPQSQ----NGRAPPPLSFSSS-PPSPAS--SV 1225
P + L S H H L PQSQ + PP L+ S + PP PAS
Sbjct: 964 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 1023
Query: 1226 SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1264
L+Q A P + G TP T TS
Sbjct: 1024 GLHQVAP------QPPFAQHPFVPGGPPPITPPTCPSTS 1056
Score = 39.7 bits (91), Expect = 0.018
Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 31/291 (10%)
Query: 901 HYNGKEFEKLLEEAQANIMK--SIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLE 958
H+ G+E L + + + K +P +E P P P PV + + +S +
Sbjct: 519 HHGGRENILLCTDCRIHFKKYGELPPIEKP--VDPPPFMFKPVKEEDDGLSGKHSMRTRR 576
Query: 959 KLG-------GKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1011
G G+ P P G T+ + D+ +GR A SS D+
Sbjct: 577 SRGSMSTLRSGRKKQPASP---------DGRTSPINEDIRSSGRNSPSAASTSSNDSKAE 627
Query: 1012 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQ------ 1065
++ K EE +S + +S EE + K + +P
Sbjct: 628 TVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES 687
Query: 1066 TSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQY---RQANGSAKKSGGDFKPTSPSLPASK 1122
+ V + P +D+ + + P ++ SA++ +P + P
Sbjct: 688 SDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGV 747
Query: 1123 IPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ--TGPPAHS 1171
PA S + + LP+ S PP P+ + P PQ T P H+
Sbjct: 748 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 798
Score = 39.3 bits (90), Expect = 0.024
Identities = 108/523 (20%), Positives = 171/523 (32%), Gaps = 73/523 (13%)
Query: 56 PVEHLSETSADSLEAMSEG-DAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDE 114
P TS + + S G ++P+ S S + V +S + KE + L
Sbjct: 592 PASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPL------- 644
Query: 115 TKQLRMPNEITSADTIRALFVSAFPQQLT-MKMLESPSVAIYIKDESRNVYYELNDVRNI 173
K + E ++DT A S+ + + SPS +SR+V E +
Sbjct: 645 -KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 703
Query: 174 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 233
D+ P+ N + + D Q++++ A+ P P P + P
Sbjct: 704 IDQDNRSTSPSIPSPQDNES----DSDSSAQQQMLQAQP--PALQAPTGVTPAPSSAPPG 757
Query: 234 PPSTPVPHSMPPSPSRIPYGGTRSMVVPG-----NATIPRDRISSLPVSRP-ISPSPSAI 287
P P P P + + P G + P A +P I P P PSP
Sbjct: 758 TPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP 817
Query: 288 LERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGG---------HPLDVP 338
P + ++G A + +A P L+ +G S G P +P
Sbjct: 818 PHPSPHPPLQPLTGS--AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 339 DHIIAYHRTAIRS-ASAYCNPSMQ--AEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASP 395
S A+AY + S+Q A QS + + P + L K PP +P
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 935
Query: 396 HRVSDLRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVD 455
+ L H H PPH P S + + P + LSSL
Sbjct: 936 --IPQLPAPQAHKH-----PPHLSGPSPFSMNAN-----------LPPPPALKPLSSLST 977
Query: 456 LGPPLMEKQVFAYSTATIPKDRETRERMQAMEKQIASLTGLVQSALFKGPITSYSKDASS 515
PP + P + + Q + A GL QS P S+
Sbjct: 978 HHPP-----------SAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLH 1026
Query: 516 EKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVG 558
+ + ++ G P ++ T P + PP G
Sbjct: 1027 QVAPQPPFAQHPFVPGGPPPIT--------PPTCPSTSTPPAG 1061
Score = 33.5 bits (75), Expect = 1.3
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 30/269 (11%)
Query: 923 PNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS-- 980
P L++ P + PLP A + S++ P G P PP + ++PG
Sbjct: 986 PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 1045
Query: 981 --------GLTTTRSGDVVYTGRKENITAKASSEDAG----PSPQTRATKYPAEEPASAW 1028
+T +G + A + AG P P + + ++
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 1029 TPSPPPVTTSSSK---DEEEEEEEGDKIMAEL-QGSSGAPQTSRMPVPMS----AKNRPG 1080
+P PPP + S D + + L +G + +T +P++ AK R
Sbjct: 1106 SPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREE 1165
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
++K ++++ Q R+ R+ +K + + + S G+ S P S
Sbjct: 1166 AIEKAKREAE-QKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSD-PQLS 1223
Query: 1141 GDSSNLPN--PPATKPSIASNPLSPQTGP 1167
G P+ PP T +IA+ P P GP
Sbjct: 1224 GPGHMRPSFEPPPT--TIAAVP--PYIGP 1248
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.0 bits (136), Expect = 1e-07
Identities = 117/519 (22%), Positives = 170/519 (32%), Gaps = 94/519 (18%)
Query: 774 EAAHTSGQ--PFHSTGAPGDAKSEVVPLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLP 831
E +SG+ P ++ + D+K+E V S V+ SSP+ Q
Sbjct: 604 EDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE----------- 652
Query: 832 HVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKK 891
VAS +S +Q P P G S+ +R+V+ E
Sbjct: 653 KVASDTEEADRTSSKKTKTQEISRPNSPSEG-----------EGESSDSRSVNDE----- 696
Query: 892 WEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSP 951
G K +++ + SIP+ + + D+ + L P
Sbjct: 697 ------------GSSDPKDIDQDNRSTSPSIPSPQDNESD-----SDSSAQQQMLQAQPP 739
Query: 952 NSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1011
L+ G +P P PP LP G T + + + P
Sbjct: 740 ----ALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV 795
Query: 1012 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT-SRMP 1070
P T + PA P +P PPP + + L GS+G P S
Sbjct: 796 PHTHIQQAPALHPQRPPSPHPPPHPSPHPP------------LQPLTGSAGQPSAPSHAQ 843
Query: 1071 VPMSAKNRPG--------TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP-TSPSLPAS 1121
P+ + PG L PG P Q Q S P TS LPAS
Sbjct: 844 PPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS 903
Query: 1122 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATK----PSIASNPLSPQTGPP---AHSASL 1174
+ S + LP + ++ PP T P+ ++ P P + +A+L
Sbjct: 904 QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANL 963
Query: 1175 IPSVSNGSLKFQSLTHTGKGH--HLSFSPQSQ----NGRAPPPLSFSSS-PPSPAS--SV 1225
P + L S H H L PQSQ + PP L+ S + PP PAS
Sbjct: 964 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 1023
Query: 1226 SLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAKETS 1264
L+Q A P + G TP T TS
Sbjct: 1024 GLHQVAP------QPPFAQHPFVPGGPPPITPPTCPSTS 1056
Score = 39.7 bits (91), Expect = 0.018
Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 31/291 (10%)
Query: 901 HYNGKEFEKLLEEAQANIMK--SIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLE 958
H+ G+E L + + + K +P +E P P P PV + + +S +
Sbjct: 519 HHGGRENILLCTDCRIHFKKYGELPPIEKP--VDPPPFMFKPVKEEDDGLSGKHSMRTRR 576
Query: 959 KLG-------GKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPS 1011
G G+ P P G T+ + D+ +GR A SS D+
Sbjct: 577 SRGSMSTLRSGRKKQPASP---------DGRTSPINEDIRSSGRNSPSAASTSSNDSKAE 627
Query: 1012 PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQ------ 1065
++ K EE +S + +S EE + K + +P
Sbjct: 628 TVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGES 687
Query: 1066 TSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQY---RQANGSAKKSGGDFKPTSPSLPASK 1122
+ V + P +D+ + + P ++ SA++ +P + P
Sbjct: 688 SDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGV 747
Query: 1123 IPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ--TGPPAHS 1171
PA S + + LP+ S PP P+ + P PQ T P H+
Sbjct: 748 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 798
Score = 39.3 bits (90), Expect = 0.024
Identities = 108/523 (20%), Positives = 171/523 (32%), Gaps = 73/523 (13%)
Query: 56 PVEHLSETSADSLEAMSEG-DAPTPFSRGSRTRASLPVVRSTNQTKERSLGVLYLQYGDE 114
P TS + + S G ++P+ S S + V +S + KE + L
Sbjct: 592 PASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPL------- 644
Query: 115 TKQLRMPNEITSADTIRALFVSAFPQQLT-MKMLESPSVAIYIKDESRNVYYELNDVRNI 173
K + E ++DT A S+ + + SPS +SR+V E +
Sbjct: 645 -KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 703
Query: 174 QDRSLLKVYNKDPAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGSTAHPPHAIPNS 233
D+ P+ N + + D Q++++ A+ P P P + P
Sbjct: 704 IDQDNRSTSPSIPSPQDNES----DSDSSAQQQMLQAQP--PALQAPTGVTPAPSSAPPG 757
Query: 234 PPSTPVPHSMPPSPSRIPYGGTRSMVVPG-----NATIPRDRISSLPVSRP-ISPSPSAI 287
P P P P + + P G + P A +P I P P PSP
Sbjct: 758 TPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP 817
Query: 288 LERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGG---------HPLDVP 338
P + ++G A + +A P L+ +G S G P +P
Sbjct: 818 PHPSPHPPLQPLTGS--AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 339 DHIIAYHRTAIRS-ASAYCNPSMQ--AEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASP 395
S A+AY + S+Q A QS + + P + L K PP +P
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 935
Query: 396 HRVSDLRMIDMHAHYNAHGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVD 455
+ L H H PPH P S + + P + LSSL
Sbjct: 936 --IPQLPAPQAHKH-----PPHLSGPSPFSMNAN-----------LPPPPALKPLSSLST 977
Query: 456 LGPPLMEKQVFAYSTATIPKDRETRERMQAMEKQIASLTGLVQSALFKGPITSYSKDASS 515
PP + P + + Q + A GL QS P S+
Sbjct: 978 HHPP-----------SAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLH 1026
Query: 516 EKMMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVG 558
+ + ++ G P ++ T P + PP G
Sbjct: 1027 QVAPQPPFAQHPFVPGGPPPIT--------PPTCPSTSTPPAG 1061
Score = 33.5 bits (75), Expect = 1.3
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 30/269 (11%)
Query: 923 PNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGS-- 980
P L++ P + PLP A + S++ P G P PP + ++PG
Sbjct: 986 PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 1045
Query: 981 --------GLTTTRSGDVVYTGRKENITAKASSEDAG----PSPQTRATKYPAEEPASAW 1028
+T +G + A + AG P P + + ++
Sbjct: 1046 PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPE 1105
Query: 1029 TPSPPPVTTSSSK---DEEEEEEEGDKIMAEL-QGSSGAPQTSRMPVPMS----AKNRPG 1080
+P PPP + S D + + L +G + +T +P++ AK R
Sbjct: 1106 SPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREE 1165
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
++K ++++ Q R+ R+ +K + + + S G+ S P S
Sbjct: 1166 AIEKAKREAE-QKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSD-PQLS 1223
Query: 1141 GDSSNLPN--PPATKPSIASNPLSPQTGP 1167
G P+ PP T +IA+ P P GP
Sbjct: 1224 GPGHMRPSFEPPPT--TIAAVP--PYIGP 1248
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 57.0 bits (136), Expect = 1e-07
Identities = 109/477 (22%), Positives = 150/477 (31%), Gaps = 94/477 (19%)
Query: 805 RHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQ------SPQI 858
RH SS SQ S +++ L S P+ +T++ + PQ SP
Sbjct: 407 RHPSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPPPQGGSGRGSPSG 466
Query: 859 PMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLD-HYNGKEF-EKLLEEAQA 916
A +L I +S R+VS+ K ++ R+ H G + L
Sbjct: 467 GSTAEASDTLSIRSSGQLSG--RSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGPLGLPPK 524
Query: 917 NIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSY 976
K P L PP TG SE G P PP P S+
Sbjct: 525 PERKQQPQLPRPPTTG-------------------GSE-------GAGAAPCPPNPANSW 558
Query: 977 LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVT 1036
+PG +R R + ++ SS+ P+ + P P A P P VT
Sbjct: 559 VPGLSPGGSRRPPRS-PERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVT 617
Query: 1037 T----------------SSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+ SSS D + G +I+ L P ++P P S
Sbjct: 618 SLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKP 677
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPAL--SPSSGKSSSLPS 1138
P P A S D P SP P + + L SP K S P
Sbjct: 678 RSPNPAA------PALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPP 731
Query: 1139 SSGDSSNLPNPPATKPSI----------ASNPLS----PQTGPPAHS------------- 1171
S S + P PP KP + A PL P PPA
Sbjct: 732 SPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPE 791
Query: 1172 ------ASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPA 1222
AS P+ +GS + S + Q PPP + +P S A
Sbjct: 792 EAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSA 848
Score = 48.5 bits (114), Expect = 4e-05
Identities = 76/297 (25%), Positives = 107/297 (36%), Gaps = 52/297 (17%)
Query: 911 LEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNS----EQDLEKLGGKSPP 966
L+E+ P PP+ P P P K E+ ++P++ E+ L+ PP
Sbjct: 717 LQESPVISKDQSPPPSPPPSYHPPP---PPTKKPEVVVEAPSASETAEEPLQDPNWPPPP 773
Query: 967 PPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPAS 1026
PP P + + + +E + AS E AGPS PA +S
Sbjct: 774 PPAPEEQDLSMAD------------FPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSS 821
Query: 1027 A--------WTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSS--GAPQTSRMPVPMSAK 1076
A +P PPP + + E G S G P + P+
Sbjct: 822 ATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVT- 880
Query: 1077 NRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSG----- 1131
P L + +L+ A A KP +L P +PSSG
Sbjct: 881 --PSLL----QMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAV 934
Query: 1132 --KSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQ 1186
K+ SL +S G SS PN P + P PQ+ PA +AS I S GS K Q
Sbjct: 935 RLKACSLAASEGLSSAQPNGPP-----EAEPRPPQS--PASTASFI--FSKGSRKLQ 982
Score = 46.2 bits (108), Expect = 2e-04
Identities = 82/346 (23%), Positives = 126/346 (36%), Gaps = 58/346 (16%)
Query: 918 IMKSIPNLEMPPATGPLPRGDAPV---DKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRR 974
+ K IP+ +PP + G + + L SP S + L + S P P R
Sbjct: 351 LSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQP-----R 405
Query: 975 SYLPGSGLTT---TRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS 1031
S P S T ++S D + + +++K SE S + P + S S
Sbjct: 406 SRHPSSSSDTWSHSQSSDTIVSDGS-TLSSKGGSEGQPESSTASNSVVPPPQGGSG-RGS 463
Query: 1032 PPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRP----------GT 1081
P +T+ + D G +L G S + + + P P + G
Sbjct: 464 PSGGSTAEASDTLSIRSSG-----QLSGRSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGP 518
Query: 1082 LDKPGKQSKLQDPRQYRQ-ANGSAKKSGGDFKPTSPSL--------------PASKIPAL 1126
L P K + Q P+ R G ++ +G P +P+ P S L
Sbjct: 519 LGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTL 578
Query: 1127 SPSSGKSSSLPSSSGDSSNLPNPPAT-------KPSIASNPLSPQTGPPAHSASLIPSVS 1179
SPSSG SS + + L PPA+ KP ++ SP + SL S S
Sbjct: 579 SPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSS 638
Query: 1180 NGSLKFQS----LTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1221
+ + +S LT G + P+ +PPP S P SP
Sbjct: 639 DPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPP----SKPRSP 680
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 57.0 bits (136), Expect = 1e-07
Identities = 67/298 (22%), Positives = 99/298 (33%), Gaps = 60/298 (20%)
Query: 951 PNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGP 1010
PN+ S PPPPPP RR+ P + L S Y K P
Sbjct: 162 PNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREK-------------P 208
Query: 1011 SPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMP 1070
P T + P P+PPPV S + +G S P
Sbjct: 209 LPPTPGQRL---HPGREGPPAPPPVKPPPSP---------------VNIRTGPSGQSLAP 250
Query: 1071 VPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSS 1130
P + PG + P + P ++ N +K+ G + +P P S P+L
Sbjct: 251 PPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSL---- 306
Query: 1131 GKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTH 1190
SN P PPA P S +P PP + NG+ +
Sbjct: 307 ------------LSNRPPPPARDP--PSRGAAPPPPPPV--------IRNGA---RDAPP 341
Query: 1191 TGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQ 1248
+ + S G+ PPP S + + P P L G + + T L ++++
Sbjct: 342 PPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDFESK 399
Score = 33.9 bits (76), Expect = 1.0
Identities = 73/275 (26%), Positives = 103/275 (37%), Gaps = 39/275 (14%)
Query: 965 PPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEP 1024
PPPPPPPP P T + R E A +D T+ K
Sbjct: 4 PPPPPPPPGPPPPPTFHQANTEQPKL---SRDEQRGRGALLQDICKG--TKLKKVTNIND 58
Query: 1025 ASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPV-PMSAKNRPGTL- 1082
SA P+ G A LQ G Q + + P+ AK+ L
Sbjct: 59 RSA------PILEKPKGSSGGYGSGG----AALQPKGGLFQGGVLKLRPVGAKDGSENLA 108
Query: 1083 DKPGKQ---SKLQDPRQ-YRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPS 1138
KP Q S+ PR A+G + + + P LP + P+L S +++ +
Sbjct: 109 GKPALQIPSSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSST 168
Query: 1139 SSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLS 1198
SS+ P PP P +N +P T P HS S P+ + + + L T G L
Sbjct: 169 GMKHSSSAPPPP--PPGRRAN--APPTPLPMHS-SKAPAYN----REKPLPPT-PGQRL- 217
Query: 1199 FSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKG 1233
P + APPP+ PPSP V++ G G
Sbjct: 218 -HPGREGPPAPPPV---KPPPSP---VNIRTGPSG 245
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-07
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 64/324 (19%)
Query: 964 SPPPPPPPPRRSYLPGS-----------GLTTTRSGDVVYTGRKENIT--------AKAS 1004
+PPPPP P P S G T DV GR+ T A+
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 1005 SEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE----EEGDKIMAELQGS 1060
GP+P+ T P S P P PV TSS +E +E EEG +
Sbjct: 285 GSALGPNPEPHLTF-----PRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG--------AT 331
Query: 1061 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYR----------QANGSAKKSGGD 1110
AP SR+P+P S RP + P + + P + + Q+ A + G
Sbjct: 332 KKAP--SRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 1111 FKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA--TKPSIASNP-LSPQTGP 1167
P +P LP P P+ + P + +PPA TK +S+P L P+ P
Sbjct: 390 -PPPAPPLPPPAPPLPPPAPPLPPAAPPLP-CAQKAAHPPAGFTKTPKSSSPALKPKPNP 447
Query: 1168 PA--HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSV 1225
P+ ++AS P + + L + + + + F S P P +
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDR---------FLSHRPGPTVAP 498
Query: 1226 SLNQGAKGTRTIHTPSLTSYKAQN 1249
+G KG R +L S A++
Sbjct: 499 QSKEGKKGPRLPEKETLLSLPAKD 522
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 49/376 (13%)
Query: 923 PNLEMPPATGPLP-RGDAPVDKVELSEDSP------NSEQDLEKLGGKSPPPPPPPPRRS 975
P+ + PA+ P R P EL +P S+ ++ G PP PP PP
Sbjct: 342 PSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP 401
Query: 976 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP-AEEPASAWTPSPP- 1033
LP + + +K P TK P + PA P+PP
Sbjct: 402 PLPPPAPPLPPAAPPLPCAQK------------AAHPPAGFTKTPKSSSPALKPKPNPPS 449
Query: 1034 PVTTSSS-----KDEEEEEEEGDKIMAELQGS-------SGAPQTSRMPVPMSAKNRPGT 1081
P T+SS +D + E+ +++ A L GS S P + P K P
Sbjct: 450 PENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKKGPRL 509
Query: 1082 LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALS--PSSGKSSSLPSS 1139
P K++ L P + K GG + + P+ +P++ P + S+
Sbjct: 510 ---PEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQI 566
Query: 1140 SGDSSNLPNPPA---TKPSIASNPLSP--QTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1194
+ + A KPSI S P P + G + + +S K T
Sbjct: 567 RNELEARLSSAAEKEAKPSIGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLL 626
Query: 1195 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTP------SLTSYKAQ 1248
S P++ G A PP + P +++ K T TP T KA
Sbjct: 627 PTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKAT 686
Query: 1249 NGSSSKATPSTAKETS 1264
+G + +T +T T+
Sbjct: 687 SGPAIASTATTLPTTT 702
Score = 38.1 bits (87), Expect = 0.054
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 1124 PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSL 1183
P P+ G + G S LP+PP+T P PL + PP A P V
Sbjct: 142 PPPGPAPGPPQDISEPPGGSP-LPSPPSTAPP--PPPLLLEPPPPPSMAPPPPPVLEALS 198
Query: 1184 KFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSP----PSPASSVSLNQGAKGTRTIHT 1239
+L+ F P + PPL+F + P P+PA + GTR
Sbjct: 199 PPHTLSSPSIPTPPDFIPPA------PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Query: 1240 PSLTSYK---AQNGSSSKAT 1256
+T +K A NG ++AT
Sbjct: 253 GGVTKWKSDVALNGRQAEAT 272
Score = 37.7 bits (86), Expect = 0.070
Identities = 75/319 (23%), Positives = 107/319 (33%), Gaps = 56/319 (17%)
Query: 950 SPNSEQDLEKLGGKSP--------PPPPP------------PPRRSYLPGSGLTTTRSGD 989
+P QD+ + G SP PPPPP PP L T S
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 990 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS----PPPVTTS------- 1038
+ T A + A P P A PA PAS T PP T
Sbjct: 207 SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPA--PASPHTVGTRLFPPGGVTKWKSDVAL 264
Query: 1039 SSKDEEEEEEEGDKIMAELQGSSGAPQTS-RMPVPMSAKNRPGTLDKPGKQSKLQDPRQY 1097
+ + E + AE +GS+ P + P S K P T + +
Sbjct: 265 NGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAP 324
Query: 1098 RQANGSAKKSGGDFKPTSPSL---PASKI--------------PALSPSSGKSSSLPSSS 1140
R+ G+ KK+ P PS PAS++ A +P+S + S +
Sbjct: 325 RKEEGATKKAPSRL-PLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQA 383
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ + P PPA + PL P P +A +P + T T K +
Sbjct: 384 DERAGTP-PPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALK 442
Query: 1201 PQSQNGRAPPPLSFSSSPP 1219
P+ P P + +SS P
Sbjct: 443 PKP---NPPSPENTASSAP 458
Score = 32.3 bits (72), Expect = 2.9
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 216 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSP-----SRIPYGGTRSMVVPGNATIPRDR 270
G P P PP A P PP+ P+P + PP P + P G T++ A P+
Sbjct: 388 GTPPPAPPLPPP-APPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 271 ISSLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIA 327
S P + + SA ++ RD E + + +A Y D +L H ++A
Sbjct: 447 PPS-----PENTASSAPVDWRDPSQMEKLRNE-LAAYLCGSRREDRFLSHRPGPTVA 497
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-07
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 64/324 (19%)
Query: 964 SPPPPPPPPRRSYLPGS-----------GLTTTRSGDVVYTGRKENIT--------AKAS 1004
+PPPPP P P S G T DV GR+ T A+
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 1005 SEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE----EEGDKIMAELQGS 1060
GP+P+ T P S P P PV TSS +E +E EEG +
Sbjct: 285 GSALGPNPEPHLTF-----PRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG--------AT 331
Query: 1061 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYR----------QANGSAKKSGGD 1110
AP SR+P+P S RP + P + + P + + Q+ A + G
Sbjct: 332 KKAP--SRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 1111 FKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA--TKPSIASNP-LSPQTGP 1167
P +P LP P P+ + P + +PPA TK +S+P L P+ P
Sbjct: 390 -PPPAPPLPPPAPPLPPPAPPLPPAAPPLP-CAQKAAHPPAGFTKTPKSSSPALKPKPNP 447
Query: 1168 PA--HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSV 1225
P+ ++AS P + + L + + + + F S P P +
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDR---------FLSHRPGPTVAP 498
Query: 1226 SLNQGAKGTRTIHTPSLTSYKAQN 1249
+G KG R +L S A++
Sbjct: 499 QSKEGKKGPRLPEKETLLSLPAKD 522
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 49/376 (13%)
Query: 923 PNLEMPPATGPLP-RGDAPVDKVELSEDSP------NSEQDLEKLGGKSPPPPPPPPRRS 975
P+ + PA+ P R P EL +P S+ ++ G PP PP PP
Sbjct: 342 PSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP 401
Query: 976 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP-AEEPASAWTPSPP- 1033
LP + + +K P TK P + PA P+PP
Sbjct: 402 PLPPPAPPLPPAAPPLPCAQK------------AAHPPAGFTKTPKSSSPALKPKPNPPS 449
Query: 1034 PVTTSSS-----KDEEEEEEEGDKIMAELQGS-------SGAPQTSRMPVPMSAKNRPGT 1081
P T+SS +D + E+ +++ A L GS S P + P K P
Sbjct: 450 PENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKKGPRL 509
Query: 1082 LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALS--PSSGKSSSLPSS 1139
P K++ L P + K GG + + P+ +P++ P + S+
Sbjct: 510 ---PEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQI 566
Query: 1140 SGDSSNLPNPPA---TKPSIASNPLSP--QTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1194
+ + A KPSI S P P + G + + +S K T
Sbjct: 567 RNELEARLSSAAEKEAKPSIGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLL 626
Query: 1195 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTP------SLTSYKAQ 1248
S P++ G A PP + P +++ K T TP T KA
Sbjct: 627 PTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKAT 686
Query: 1249 NGSSSKATPSTAKETS 1264
+G + +T +T T+
Sbjct: 687 SGPAIASTATTLPTTT 702
Score = 38.1 bits (87), Expect = 0.054
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 1124 PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSL 1183
P P+ G + G S LP+PP+T P PL + PP A P V
Sbjct: 142 PPPGPAPGPPQDISEPPGGSP-LPSPPSTAPP--PPPLLLEPPPPPSMAPPPPPVLEALS 198
Query: 1184 KFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSP----PSPASSVSLNQGAKGTRTIHT 1239
+L+ F P + PPL+F + P P+PA + GTR
Sbjct: 199 PPHTLSSPSIPTPPDFIPPA------PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Query: 1240 PSLTSYK---AQNGSSSKAT 1256
+T +K A NG ++AT
Sbjct: 253 GGVTKWKSDVALNGRQAEAT 272
Score = 37.7 bits (86), Expect = 0.070
Identities = 75/319 (23%), Positives = 107/319 (33%), Gaps = 56/319 (17%)
Query: 950 SPNSEQDLEKLGGKSP--------PPPPP------------PPRRSYLPGSGLTTTRSGD 989
+P QD+ + G SP PPPPP PP L T S
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 990 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS----PPPVTTS------- 1038
+ T A + A P P A PA PAS T PP T
Sbjct: 207 SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPA--PASPHTVGTRLFPPGGVTKWKSDVAL 264
Query: 1039 SSKDEEEEEEEGDKIMAELQGSSGAPQTS-RMPVPMSAKNRPGTLDKPGKQSKLQDPRQY 1097
+ + E + AE +GS+ P + P S K P T + +
Sbjct: 265 NGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAP 324
Query: 1098 RQANGSAKKSGGDFKPTSPSL---PASKI--------------PALSPSSGKSSSLPSSS 1140
R+ G+ KK+ P PS PAS++ A +P+S + S +
Sbjct: 325 RKEEGATKKAPSRL-PLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQA 383
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ + P PPA + PL P P +A +P + T T K +
Sbjct: 384 DERAGTP-PPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALK 442
Query: 1201 PQSQNGRAPPPLSFSSSPP 1219
P+ P P + +SS P
Sbjct: 443 PKP---NPPSPENTASSAP 458
Score = 32.3 bits (72), Expect = 2.9
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 216 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSP-----SRIPYGGTRSMVVPGNATIPRDR 270
G P P PP A P PP+ P+P + PP P + P G T++ A P+
Sbjct: 388 GTPPPAPPLPPP-APPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 271 ISSLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIA 327
S P + + SA ++ RD E + + +A Y D +L H ++A
Sbjct: 447 PPS-----PENTASSAPVDWRDPSQMEKLRNE-LAAYLCGSRREDRFLSHRPGPTVA 497
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 2e-07
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 64/324 (19%)
Query: 964 SPPPPPPPPRRSYLPGS-----------GLTTTRSGDVVYTGRKENIT--------AKAS 1004
+PPPPP P P S G T DV GR+ T A+
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 1005 SEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE----EEGDKIMAELQGS 1060
GP+P+ T P S P P PV TSS +E +E EEG +
Sbjct: 285 GSALGPNPEPHLTF-----PRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG--------AT 331
Query: 1061 SGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYR----------QANGSAKKSGGD 1110
AP SR+P+P S RP + P + + P + + Q+ A + G
Sbjct: 332 KKAP--SRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 1111 FKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA--TKPSIASNP-LSPQTGP 1167
P +P LP P P+ + P + +PPA TK +S+P L P+ P
Sbjct: 390 -PPPAPPLPPPAPPLPPPAPPLPPAAPPLP-CAQKAAHPPAGFTKTPKSSSPALKPKPNP 447
Query: 1168 PA--HSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSV 1225
P+ ++AS P + + L + + + + F S P P +
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDR---------FLSHRPGPTVAP 498
Query: 1226 SLNQGAKGTRTIHTPSLTSYKAQN 1249
+G KG R +L S A++
Sbjct: 499 QSKEGKKGPRLPEKETLLSLPAKD 522
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 49/376 (13%)
Query: 923 PNLEMPPATGPLP-RGDAPVDKVELSEDSP------NSEQDLEKLGGKSPPPPPPPPRRS 975
P+ + PA+ P R P EL +P S+ ++ G PP PP PP
Sbjct: 342 PSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP 401
Query: 976 YLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYP-AEEPASAWTPSPP- 1033
LP + + +K P TK P + PA P+PP
Sbjct: 402 PLPPPAPPLPPAAPPLPCAQK------------AAHPPAGFTKTPKSSSPALKPKPNPPS 449
Query: 1034 PVTTSSS-----KDEEEEEEEGDKIMAELQGS-------SGAPQTSRMPVPMSAKNRPGT 1081
P T+SS +D + E+ +++ A L GS S P + P K P
Sbjct: 450 PENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKKGPRL 509
Query: 1082 LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALS--PSSGKSSSLPSS 1139
P K++ L P + K GG + + P+ +P++ P + S+
Sbjct: 510 ---PEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQI 566
Query: 1140 SGDSSNLPNPPA---TKPSIASNPLSP--QTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1194
+ + A KPSI S P P + G + + +S K T
Sbjct: 567 RNELEARLSSAAEKEAKPSIGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLL 626
Query: 1195 HHLSFSPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTP------SLTSYKAQ 1248
S P++ G A PP + P +++ K T TP T KA
Sbjct: 627 PTTSLQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGPATPLKATSGPTTPLKAT 686
Query: 1249 NGSSSKATPSTAKETS 1264
+G + +T +T T+
Sbjct: 687 SGPAIASTATTLPTTT 702
Score = 38.1 bits (87), Expect = 0.054
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 1124 PALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSL 1183
P P+ G + G S LP+PP+T P PL + PP A P V
Sbjct: 142 PPPGPAPGPPQDISEPPGGSP-LPSPPSTAPP--PPPLLLEPPPPPSMAPPPPPVLEALS 198
Query: 1184 KFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSP----PSPASSVSLNQGAKGTRTIHT 1239
+L+ F P + PPL+F + P P+PA + GTR
Sbjct: 199 PPHTLSSPSIPTPPDFIPPA------PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Query: 1240 PSLTSYK---AQNGSSSKAT 1256
+T +K A NG ++AT
Sbjct: 253 GGVTKWKSDVALNGRQAEAT 272
Score = 37.7 bits (86), Expect = 0.070
Identities = 75/319 (23%), Positives = 107/319 (33%), Gaps = 56/319 (17%)
Query: 950 SPNSEQDLEKLGGKSP--------PPPPP------------PPRRSYLPGSGLTTTRSGD 989
+P QD+ + G SP PPPPP PP L T S
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 990 VVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAWTPS----PPPVTTS------- 1038
+ T A + A P P A PA PAS T PP T
Sbjct: 207 SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPA--PASPHTVGTRLFPPGGVTKWKSDVAL 264
Query: 1039 SSKDEEEEEEEGDKIMAELQGSSGAPQTS-RMPVPMSAKNRPGTLDKPGKQSKLQDPRQY 1097
+ + E + AE +GS+ P + P S K P T + +
Sbjct: 265 NGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAP 324
Query: 1098 RQANGSAKKSGGDFKPTSPSL---PASKI--------------PALSPSSGKSSSLPSSS 1140
R+ G+ KK+ P PS PAS++ A +P+S + S +
Sbjct: 325 RKEEGATKKAPSRL-PLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQA 383
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ + P PPA + PL P P +A +P + T T K +
Sbjct: 384 DERAGTP-PPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALK 442
Query: 1201 PQSQNGRAPPPLSFSSSPP 1219
P+ P P + +SS P
Sbjct: 443 PKP---NPPSPENTASSAP 458
Score = 32.3 bits (72), Expect = 2.9
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 216 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSP-----SRIPYGGTRSMVVPGNATIPRDR 270
G P P PP A P PP+ P+P + PP P + P G T++ A P+
Sbjct: 388 GTPPPAPPLPPP-APPLPPPAPPLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPN 446
Query: 271 ISSLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIA 327
S P + + SA ++ RD E + + +A Y D +L H ++A
Sbjct: 447 PPS-----PENTASSAPVDWRDPSQMEKLRNE-LAAYLCGSRREDRFLSHRPGPTVA 497
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 55.8 bits (133), Expect = 2e-07
Identities = 80/340 (23%), Positives = 124/340 (36%), Gaps = 60/340 (17%)
Query: 966 PPPPPPPRRSYLP----------GSGLTTTRSGDV-VYTGRK-ENITAKASSEDAGPSPQ 1013
PP PPP + P GS L++ + + + GR E T+ A E G S
Sbjct: 1451 PPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDSEV 1510
Query: 1014 TRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAE-LQGSSGAPQTSRMPVP 1072
+ + EE SA P PP T+ S K E ++A+ +SG +S V
Sbjct: 1511 SASAASLLEEQQSAQLPQAPPQTSDSVKKEP--------VLAQPAVSNSGTAASSTSLVA 1562
Query: 1073 MSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSP-SLPASKIPALSPS-- 1129
+SA+ P T P +++ P G + P ++ S P S +
Sbjct: 1563 LSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTS 1622
Query: 1130 ------SGKSSSLPSSSGDSSNLPNPPATKPSIASNPLS--------------------- 1162
S ++++ + + SS PPA S A N L+
Sbjct: 1623 IVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTA 1682
Query: 1163 -----PQTGPPAHSASLIPSVSNGSLKFQSLTHTGKG--HHLSFSPQSQNGRAPPPLS-- 1213
QTG A +A+ P VS+ + T G +F S G++ +
Sbjct: 1683 PSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASV 1742
Query: 1214 FSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSS 1253
FS S P +S + Q A T T + S+ + SSS
Sbjct: 1743 FSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSS 1782
Score = 50.4 bits (119), Expect = 1e-05
Identities = 72/293 (24%), Positives = 105/293 (35%), Gaps = 45/293 (15%)
Query: 917 NIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKS-------PPPPP 969
+++K+ L + P G P +P S Q +KL + PP P
Sbjct: 412 SLIKTPERLSLEGERQPKSPGSTPT--------TPTSSQAPQKLDASAAAAPASLPPSSP 463
Query: 970 PPPRRSY--LPGSGLTTTRS-------GDVVYTGRKENITAKASSEDAGPSPQTRATKY- 1019
P ++ LP G T S TG + ++ + S A P P +
Sbjct: 464 AAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFV 523
Query: 1020 PAEEPASAWTPSPPPVTTSSSK--------DEEEEEEEGDKIMAE--LQGSSGAPQTSRM 1069
P + + A TP+ PV S++ E + A S P TS +
Sbjct: 524 PPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAV 583
Query: 1070 PVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPS 1129
V +S K P S+ P + SG PT S P S +P
Sbjct: 584 KVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPL---- 639
Query: 1130 SGKSSSLPSSSGDS---SNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVS 1179
KSS LPS SG S S+ P P + S P + + G P + SL P+V+
Sbjct: 640 --KSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSP-QAKSLQPAVA 689
Score = 41.6 bits (96), Expect = 0.005
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 1122 KIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNG 1181
K P +P++ SS P D+S P + PS + P++ + PA A + S +
Sbjct: 429 KSPGSTPTTPTSSQAPQKL-DASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSS 487
Query: 1182 SLKFQSLTHTGKG-HHLSFSPQSQNGRAPPPLSFSSSPPSPAS 1223
SLK S T TG+ + S S S+ P P +FS PPS AS
Sbjct: 488 SLK-SSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKAS 529
Score = 31.2 bits (69), Expect = 6.6
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 33/196 (16%)
Query: 1098 RQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGK-------SSSLPSSSGDSSNLPNPP 1150
++ + SA + P+SP+ P + +L P+ G SSSL SS+ + PP
Sbjct: 445 QKLDASAAAAPASLPPSSPAAPIATF-SLLPAGGAPTVFSFGSSSLKSSATVTGE---PP 500
Query: 1151 ATKPSIASNPLSPQTGP------PAHSASL--IPSVSNGSLKFQSLTHTGKGHHLSFSPQ 1202
+ S+ +P GP P ASL P+ S + S + G +
Sbjct: 501 SYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLEST 560
Query: 1203 SQNGRAPPPLSFSSSPPSPASSVSLNQGAKGT-RTIHTP-------------SLTSYKAQ 1248
+ P ++ S P S+V +N K T TP S S A
Sbjct: 561 PVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAA 620
Query: 1249 NGSSSKATPSTAKETS 1264
+G S TP +A +S
Sbjct: 621 SGPLSHPTPLSAPPSS 636
Score = 31.2 bits (69), Expect = 6.6
Identities = 44/173 (25%), Positives = 61/173 (35%), Gaps = 34/173 (19%)
Query: 1094 PRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLP-NPPAT 1152
P + A SGG KP+ ++P S P S + S++ P SS+ P P T
Sbjct: 1244 PSTKESSQPDAFSSGGGSKPSYEAIPESSPP--SGITSASNTTPGEPAASSSRPVAPSGT 1301
Query: 1153 KPSIASNPLSPQTGPPAHSASLIPSVSNGSL-----------KFQSLTHTGKGHHLSFS- 1200
S S+ L +T P L PS G S T K S +
Sbjct: 1302 ALSTTSSKL--ETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTS 1359
Query: 1201 ---------PQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTS 1244
P N APP L + PP +S+ T ++ P+ TS
Sbjct: 1360 TQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSAT--------TTSVAPPAATS 1404
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 55.8 bits (133), Expect = 2e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 967
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 230 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 284
Query: 968 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1021
P P +S P TT T ++ T P TK PA
Sbjct: 285 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 344
Query: 1022 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 345 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 398
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 399 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 455
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ P P TK + P P P +A P + LT T +
Sbjct: 456 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 502
Query: 1201 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1255
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 503 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562
Query: 1256 TPSTAKETS 1264
P+T KET+
Sbjct: 563 APTTPKETA 571
Score = 54.3 bits (129), Expect = 7e-07
Identities = 86/399 (21%), Positives = 131/399 (32%), Gaps = 54/399 (13%)
Query: 911 LEEAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSP-- 965
+++ + N K P + P A L GD V + S N K+ P
Sbjct: 66 VKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPIN 125
Query: 966 PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRKENITA--------KASSE 1006
P P PP + LT TT + T KE T+ K S++
Sbjct: 126 PRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK 185
Query: 1007 DAGPSPQTRA---------TKYPA------------EEPASAWTPSPPPVTTSSSKDEEE 1045
D P+ + A TK PA +EPAS P P T S+ +
Sbjct: 186 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 245
Query: 1046 EEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPGKQSKLQDPRQYRQANGSA 1104
E A AP T++ P P + K P T +P + P ++ +
Sbjct: 246 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT 305
Query: 1105 KKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ 1164
K PT+P PA P + P++ + P PA P +P+
Sbjct: 306 PKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 362
Query: 1165 TGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASS 1224
P P+ + K S T + + + P P + S+P +P
Sbjct: 363 EPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 418
Query: 1225 VSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1262
T P+ T+ K ++ K P+T KE
Sbjct: 419 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 457
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 971
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 457 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 509
Query: 972 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1025
P TT T KA++ + P K PA +EPA
Sbjct: 510 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 565
Query: 1026 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+ TP TT ++ K +A T P P + K
Sbjct: 566 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 625
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 626 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 680
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
D P T P+ P PA + P + + + T H S
Sbjct: 681 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 740
Query: 1201 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1259
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 741 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 789
Query: 1260 AKET 1263
+ T
Sbjct: 790 LRTT 793
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 826 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 885
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 530 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 582
Query: 886 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 944
K K+ KE + + P P T P P+ AP
Sbjct: 583 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 637
Query: 945 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1002
E + +P K + P P P + G T+T S T KE
Sbjct: 638 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 697
Query: 1003 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
A + P+P T T P S T + P T S DE E + L+
Sbjct: 698 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 757
Query: 1060 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1119
S P P + K T K ++ +D R + +A K + T+
Sbjct: 758 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 815
Query: 1120 ASKIPA 1125
SKI A
Sbjct: 816 ESKITA 821
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 55.8 bits (133), Expect = 2e-07
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 43/369 (11%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPP---- 967
+E +KS P PA P AP E +P + ++ K P P
Sbjct: 271 KEPTPTTIKSAPTTPKEPA--PTTTKSAPTTP---KEPAPTTTKEPAPTTPKEPAPTTTK 325
Query: 968 -PPPPPRRSY--LPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA--- 1021
P P +S P TT T ++ T P TK PA
Sbjct: 326 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Query: 1022 -EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+EPA P P T +E A +P T + P P + K+ P
Sbjct: 386 PKEPAPTAPKKPAPTTPKEPAPTTPKEP------APTTTKEPSPTTPKEPAPTTTKSAPT 439
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T +P + P ++ + + K PT+P PA P + P++
Sbjct: 440 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA---PTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
+ P P TK + P P P +A P + LT T +
Sbjct: 497 KE----PAPTTTKKPAPTTPKEPAPTTPKETAPTTP---------KKLTPTTPEKLAPTT 543
Query: 1201 PQSQNGRAPPPLSFSS----SPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-A 1255
P+ P L+ ++ +P +P A T P+ T+ K ++ K
Sbjct: 544 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603
Query: 1256 TPSTAKETS 1264
P+T KET+
Sbjct: 604 APTTPKETA 612
Score = 54.3 bits (129), Expect = 7e-07
Identities = 86/399 (21%), Positives = 131/399 (32%), Gaps = 54/399 (13%)
Query: 911 LEEAQANIMKSIPNLEMP---PATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSP-- 965
+++ + N K P + P A L GD V + S N K+ P
Sbjct: 107 VKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPIN 166
Query: 966 PPPPPPPRRSYLPGSGLT-----------TTRSGDVVYTGRKENITA--------KASSE 1006
P P PP + LT TT + T KE T+ K S++
Sbjct: 167 PRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK 226
Query: 1007 DAGPSPQTRA---------TKYPA------------EEPASAWTPSPPPVTTSSSKDEEE 1045
D P+ + A TK PA +EPAS P P T S+ +
Sbjct: 227 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 286
Query: 1046 EEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN-RPGTLDKPGKQSKLQDPRQYRQANGSA 1104
E A AP T++ P P + K P T +P + P ++ +
Sbjct: 287 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT 346
Query: 1105 KKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQ 1164
K PT+P PA P + P++ + P PA P +P+
Sbjct: 347 PKKPA---PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 403
Query: 1165 TGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASS 1224
P P+ + K S T + + + P P + S+P +P
Sbjct: 404 EPAPTTPKEPAPTTT----KEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Query: 1225 VSLNQGAKGTRTIHTPSLTSYKAQNGSSSK-ATPSTAKE 1262
T P+ T+ K ++ K P+T KE
Sbjct: 460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 498
Score = 53.5 bits (127), Expect = 1e-06
Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 39/364 (10%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPP 971
E A K P PA P+ AP +L+ +P EKL +P P P
Sbjct: 498 EPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTP------EKLAPTTPEKPAPT 550
Query: 972 PRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA----EEPA-- 1025
P TT T KA++ + P K PA +EPA
Sbjct: 551 TPEELAP----TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 606
Query: 1026 -----SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPG 1080
+ TP TT ++ K +A T P P + K
Sbjct: 607 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 666
Query: 1081 TLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSS 1140
T K + ++P G+A + + PT+P PA K L+P++ K + S++
Sbjct: 667 TTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPK--ELAPTTTKGPT--STT 721
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
D P T P+ P PA + P + + + T H S
Sbjct: 722 SDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 781
Query: 1201 PQSQNGRA-PPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPST 1259
+ A P P + +SP P G T TP+ T + + K T
Sbjct: 782 ESTPELSAEPTPKALENSPKEP-----------GVPTTKTPAATKPEMTTTAKDKTTERD 830
Query: 1260 AKET 1263
+ T
Sbjct: 831 LRTT 834
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/306 (22%), Positives = 100/306 (32%), Gaps = 20/306 (6%)
Query: 826 PAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSI 885
PA P A++P P+E T AP +P+ P + +E + K A +
Sbjct: 571 PAPTTPK-AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP------KETAPTTPKGTAPTT 623
Query: 886 EKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPL-PRGDAPVDKV 944
K K+ KE + + P P T P P+ AP
Sbjct: 624 LKEPAPTTPKKPA-----PKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 678
Query: 945 ELSEDSPNSEQDLE-KLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK- 1002
E + +P K + P P P + G T+T S T KE
Sbjct: 679 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 738
Query: 1003 ---ASSEDAGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
A + P+P T T P S T + P T S DE E + L+
Sbjct: 739 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 798
Query: 1060 SSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLP 1119
S P P + K T K ++ +D R + +A K + T+
Sbjct: 799 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPETTTAAPKMTKETATTTEKTT 856
Query: 1120 ASKIPA 1125
SKI A
Sbjct: 857 ESKITA 862
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 55.8 bits (133), Expect = 2e-07
Identities = 142/702 (20%), Positives = 245/702 (34%), Gaps = 87/702 (12%)
Query: 608 KVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKKDSTAASRLVT 667
KVM K + V +R +E+E +K L E + V E+L K
Sbjct: 812 KVMGIPKETAERVGPERGPLERETEKLLPERQTDVTG-------EEELTKGK-------- 856
Query: 668 LKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRV 727
+D E L R + GE + + R L++E+E ++E+ + +L +
Sbjct: 857 -QDREQKQLLARDTQRQESDKNGESASPERD-RESLKVEIETSEEIQEKQVQKQTLPSKA 914
Query: 728 RSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTG 787
+ R V + + + + +E+ T + + + GQ T
Sbjct: 915 FERE-----VERPVANRECDPAELEEKVPKVILERDTQRG--EPEGGSQDQKGQASSPTP 967
Query: 788 APGDAKSEVV-PLSGMMVRHAQS----SPVVIQPSQHSVALLN----PAQNLPHVASSPA 838
PG ++ P S + +QS SPV P +H LLN PA+ + ++
Sbjct: 968 EPGVGAGDLPGPTSAPVPSGSQSGGRGSPV--SPRRHQKGLLNCKMPPAEKASRIRAAEK 1025
Query: 839 VPQ------EATSTLQMSQAPQSPQIPMNGSAMQSLFIEEIHSVSAKNRAVSIEKAEKKW 892
V + +A + +AP PQ P+N + + L + S + ++ K +
Sbjct: 1026 VSRGDQESPDACLPPTVPEAPAPPQKPLNSQSQKHLAPPPLLSPLLPSIKPTVRKTRQDG 1085
Query: 893 EEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPN 952
++ E E + + KS + PAT P + P
Sbjct: 1086 SQEAPEAPL--SSELEPFHPKPKIRTRKS-SRMTPFPATSAAPEPHPSTSTAQPVTPKPT 1142
Query: 953 SEQDLEKLGGKSPPPPPP--PPRRSYLPGSGL---TTTRSGDVVYTGRKENITAKASSED 1007
S+ + S P P P P + T+ V GRK + K + E
Sbjct: 1143 SQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVK-TPET 1201
Query: 1008 AGPS-----PQTRATKYPAEEPASAWT----------------PSPPPVTTSSSKDEEEE 1046
P+ P T + EP S T P+ P + S+S D+
Sbjct: 1202 VVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVT 1261
Query: 1047 EEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKK 1106
E + + S +T VP + + RP T K + N S+ K
Sbjct: 1262 SEPTYQATRGRKNRSSV-KTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVK 1320
Query: 1107 SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTG 1166
+ PT+P L S + +S S + S++ NP +T P P S T
Sbjct: 1321 TPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTE 1380
Query: 1167 PPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAP--PPLSFSSSPPSPASS 1224
P + P ++ + + + +GK +P++ AP P + + P +P +
Sbjct: 1381 QP-----VTPEPTSRATRGRKNRSSGK------TPETLVPTAPKLEPSTSTDQPVTPEPT 1429
Query: 1225 VSLNQGAKGTRTIHTPSLTSYKAQNGSSSKAT--PSTAKETS 1264
+G ++ TP A S +T P T + TS
Sbjct: 1430 SQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPVTPEPTS 1471
Score = 42.4 bits (98), Expect = 0.003
Identities = 49/249 (19%), Positives = 93/249 (37%), Gaps = 14/249 (5%)
Query: 928 PPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRS 987
P T RG V+ E + +L+ P P R+ ++ ++
Sbjct: 1467 PEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKT 1526
Query: 988 GDVVYTGRKENITAKASSEDAGPSPQTRATK----YPAEEPASAWTPSPPPVTTSSSKDE 1043
+ V E + ++ + P P +RAT+ + + + P P + S+S+++
Sbjct: 1527 PETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQ 1586
Query: 1044 EEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGS 1103
E + + + + +T VP + + P T KL R+ N S
Sbjct: 1587 LVTPEPTSR-ATRCRTNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRATRRKTNRS 1645
Query: 1104 AKK-------SGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPA-TKPS 1155
+ K + D +P +P+ S P G+S +L SS+ + +P P P
Sbjct: 1646 SVKTPKPVEPAASDLEPFTPT-DQSVTPEAIAQGGQSKTLRSSTVRAMPVPTTPEFQSPV 1704
Query: 1156 IASNPLSPQ 1164
P+SP+
Sbjct: 1705 TTDQPISPE 1713
Score = 39.7 bits (91), Expect = 0.018
Identities = 81/427 (18%), Positives = 148/427 (34%), Gaps = 35/427 (8%)
Query: 831 PHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQSLFIEE--------IHSVSAKNRA 882
P V ++P + Q +TST Q + + Q+ + S+ E + ++ +R
Sbjct: 1160 PVVPTAPEL-QPSTSTDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTALELQPSTSTDRP 1218
Query: 883 VSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVD 942
V+ E + ++ + E Q + P P T RG
Sbjct: 1219 VTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEP--TYQATRGRKNRS 1276
Query: 943 KVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAK 1002
V+ E + +L P P P R+ + +++ ++ + V E +
Sbjct: 1277 SVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQIST 1336
Query: 1003 ASSEDAGPSPQTRATKY-----PAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAEL 1057
++ + P P +R T+ + P S P P + S+S ++ E +
Sbjct: 1337 STDQPVTPKPTSRTTRSRTNMSSVKNPEST-VPIAPELPPSTSTEQPVTPEPTSRATRGR 1395
Query: 1058 QGSSGAPQTSRMPVPMSAKNRPGT-LDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSP 1116
+ S +T VP + K P T D+P + R N S+ K+ PT+P
Sbjct: 1396 KNRSSG-KTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGR-TNRSSVKTPETVVPTAP 1453
Query: 1117 SLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIP 1176
L S + +S D S++ P P+ S T P S
Sbjct: 1454 ELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEP--- 1510
Query: 1177 SVSNGSLKFQSLTHTGKGHHLSF-SPQSQNGRAP--PPLSFSSSPPSPASSVSLNQGAKG 1233
S T G+ + S +P++ AP P + + P +P + +G
Sbjct: 1511 ---------TSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTN 1561
Query: 1234 TRTIHTP 1240
++ TP
Sbjct: 1562 RSSVKTP 1568
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 55.8 bits (133), Expect = 2e-07
Identities = 72/307 (23%), Positives = 106/307 (34%), Gaps = 57/307 (18%)
Query: 961 GGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTG------------------RKENITAK 1002
G ++PP P PG TTR G + G ++ ++A
Sbjct: 91 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 150
Query: 1003 ASSEDAGPSPQTRATKYPAEEPASAWTPS-PPPVTTSSSKDEEEEEEEGDKIMAELQGSS 1061
A + +GP+P T + A+ P P ++ + E + +E +
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 210
Query: 1062 GAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDP-RQYRQANGSAKKSGGDFKPTSPSLPA 1120
+P R P RP + + L P R A G+ + +P L A
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270
Query: 1121 SK-----------IPALSPSSGKSSSLPSSSGDSS--------NLPNPPATKPSIASNPL 1161
+ PAL P S + PS S S LP+PPAT PS A+ L
Sbjct: 271 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSL 330
Query: 1162 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1221
T H S +PS L + PQ+ A PPL +PPSP
Sbjct: 331 GSPTLQATH--SFLPSPPLSPL-------------ATPPPQAPPALALPPL---QAPPSP 372
Query: 1222 ASSVSLN 1228
+S L+
Sbjct: 373 PASPPLS 379
Score = 47.0 bits (110), Expect = 1e-04
Identities = 77/347 (22%), Positives = 110/347 (31%), Gaps = 56/347 (16%)
Query: 910 LLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPP 969
L A ++ S L P +GP RG P S+ P Q L PP
Sbjct: 225 LQRPASRSLSSSATPLSSPARSGPSARG-TPRAPAHPSQPKPKGLQALR-------PPQV 276
Query: 970 PPPRRSYLPGSG------LTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEE 1023
PPR+ P G L T ++ S PS T + P +
Sbjct: 277 TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Query: 1024 PASAWTPSPP--PVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRM-PVPMSAKNRPG 1080
++ PSPP P+ T + + LQ P + + P+ + P
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPA------LALPPLQAPPSPPASPPLSPLATPSPQAPN 390
Query: 1081 TL------------DKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSP 1128
L P Q+ P + + S +P L P SP
Sbjct: 391 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 450
Query: 1129 SSGKSSSLPSSSGDSSNLPN------PPATKPSIASNPLSPQTGPPAHSASLIPSVSNGS 1182
S++ P + P PP P++A+ PL PPA P + S
Sbjct: 451 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510
Query: 1183 LKFQSLTHTGKGHHLSFSPQSQNGRAPPPLS--FSSSPPSPASSVSL 1227
L L +P Q APP L+ PPSP +S +L
Sbjct: 511 LPMSPLA----------TPPPQ---APPVLAAPLLQVPPSPPASPTL 544
Score = 43.5 bits (101), Expect = 0.001
Identities = 74/318 (23%), Positives = 106/318 (33%), Gaps = 58/318 (18%)
Query: 962 GKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPA 1021
G PPPP P + G+ R G T S+ AGP+ +R
Sbjct: 31 GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSR------ 84
Query: 1022 EEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGT 1081
PAS PP +S P P S RPG
Sbjct: 85 -PPASGRGERAPPAKNTS------------------------PGPVSSPGRASGTTRPGP 119
Query: 1082 LDKPGKQSKLQDPRQYRQANGSAKK---SGGDFKPTSPSLPASKIPAL---SPSSGKSSS 1135
L + G + ++ +A + K+ S G + TS P + PA+ S ++G
Sbjct: 120 LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 179
Query: 1136 LPSSSGDSSNLPNPPATKP-SIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKG 1194
LP + S P PP P S+ T P+ +A PS G + S + +
Sbjct: 180 LPRPA--PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 1195 HHLSFSPQS-QNGRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQN---- 1249
LS +S + R P S P P KG + + P +T +
Sbjct: 238 TPLSSPARSGPSARGTPRAPAHPSQPKP----------KGLQALRPPQVTPPRKDAAPAL 287
Query: 1250 ---GSSSKATPSTAKETS 1264
SS ATPS + S
Sbjct: 288 GPLSSSPLATPSPSAPPS 305
Score = 34.7 bits (78), Expect = 0.59
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 13/84 (15%)
Query: 215 PGAPRPGSTAHPPHAIPNSPPSTP--VPHSMPPSPSRIPYGGTRSMVV-------PGNAT 265
P + P S A PP +P SPP++P P + PP + P + P AT
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Query: 266 IPRDRISSLPVS----RPISPSPS 285
P + S P S P SPS S
Sbjct: 487 PPLQALPSPPASFPGQAPFSPSAS 510
Score = 33.5 bits (75), Expect = 1.3
Identities = 28/83 (33%), Positives = 31/83 (37%), Gaps = 14/83 (16%)
Query: 215 PGAPRPGSTAHPPHAIPNS------------PPSTPV--PHSMPPSPSRIPYGGTRSMVV 260
P +P A P PN+ PPS PV P S P SP P S
Sbjct: 373 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 432
Query: 261 PGNATIPRDRISSLPVSRPISPS 283
P A P S P S P+SPS
Sbjct: 433 PSLAAPPLQVPPSPPASPPMSPS 455
Score = 33.1 bits (74), Expect = 1.7
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 915 QANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRR 974
QA + + P L++PP+ P AP P++ +L P PPPPP R
Sbjct: 522 QAPPVLAAPLLQVPPSPPASPTLQAPRRP---PTPGPDTSVSGPRLTLALAPGPPPPPSR 578
Query: 975 SYLPGSGLTTTRSGDVVYTGRKENITA---KASSEDAGPSPQTRATKYPAEEPA----SA 1027
S P S T SG + G + T+ + D+GP A+ P E A +A
Sbjct: 579 S--PSS----TLSGPDL-AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA 631
Query: 1028 WTPSPPP 1034
W+ P P
Sbjct: 632 WSRGPAP 638
Score = 31.6 bits (70), Expect = 5.0
Identities = 26/82 (31%), Positives = 29/82 (35%), Gaps = 15/82 (18%)
Query: 215 PGAPRPGSTAHPPHAIPNSPPSTP--------------VPHSMPPSPSRIPYGGTRSMVV 260
P AP P +A P SPP+TP HS PSP P
Sbjct: 300 PSAP-PSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 358
Query: 261 PGNATIPRDRISSLPVSRPISP 282
P A P S P S P+SP
Sbjct: 359 PALALPPLQAPPSPPASPPLSP 380
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 55.8 bits (133), Expect = 2e-07
Identities = 91/324 (28%), Positives = 126/324 (38%), Gaps = 55/324 (16%)
Query: 950 SPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITA---KASSE 1006
+P S+ + K PPPPPP S SG + G KE T + SE
Sbjct: 771 TPRSQSFALRARRKGPPPPPPKRLSSV---SGPSPEPPPLDESPGPKEGATGPRRRTLSE 827
Query: 1007 DAGPS-------PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
AGPS P A+ EEP P P + SS + EEG+ + +
Sbjct: 828 PAGPSEPPGPPAPAGPASDTEEEEPG----PEGTPPSRGSSGEGLPFAEEGNLTIKQRPK 883
Query: 1060 SSGAPQTSRMPVPM----------SAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1109
+G P PVP + K RP ++ Q+ L A G A + G
Sbjct: 884 PAG-PPPRETPVPPGLDFNLTESDTVKRRPKCREREPLQTAL-------LAFGVASATPG 935
Query: 1110 DFKP-TSP----SLPASKIPALSPSSGKSSSLPSSSGDSSNL--PNPPATKPSIASNPLS 1162
P SP S PAS +P PSS + +P+ S + P PP P + S+ S
Sbjct: 936 PAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAAS 995
Query: 1163 ---PQTGPPAHSASLIPSVSNGSL-KFQSLTHTGKGHHLSFS-PQSQNGRAPPPLSFSSS 1217
+T PPA A+L+ G+ K S+ T L+FS P+ P P+
Sbjct: 996 RWNGETEPPAAPAALLKVPGAGTAPKPVSVACT----QLAFSGPKLAPRLGPRPV----P 1047
Query: 1218 PPSPASSVSLNQGAKGTRTIHTPS 1241
PP P S+ ++ G R T S
Sbjct: 1048 PPRPESTGTVGPGQAQQRLEQTSS 1071
Score = 37.0 bits (84), Expect = 0.12
Identities = 74/327 (22%), Positives = 110/327 (33%), Gaps = 46/327 (14%)
Query: 909 KLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPP 968
+L + + ++ + N E P GP + + SE SP E GG P P
Sbjct: 556 RLAKGPELMAIEGLENGEGPATAGPR------LLTFQGSELSP--ELQAAMAGGGPEPLP 607
Query: 969 PPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTR----ATKYPAEEP 1024
PP R G + SG +E + S D P PQ R T+ P +
Sbjct: 608 LPPARSPSQESIGARSRGSGH-----SQEQPAPQPSGGDPSP-PQERNLPEGTERPPKLC 661
Query: 1025 ASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDK 1084
+S PPP + G A S A + P P K R +L +
Sbjct: 662 SSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSR 721
Query: 1085 PGKQSKLQDPRQYRQANGSAKKSGGDF-----KPTSPSLPASKIPALSPSSGKSSSLPSS 1139
PG + +A G + G + +P +L + P+++P+ + + S
Sbjct: 722 PGPTEGDAEG----EAEGPVGSTLGSYATLTRRPGRSALVRTS-PSVTPTPARGTPRSQS 776
Query: 1140 SGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1199
+ PP P S+ P PP S P G+ TG
Sbjct: 777 FALRARRKGPPPPPPKRLSSVSGPSPEPPPLDES--PGPKEGA--------TGPRRRTLS 826
Query: 1200 SPQSQNGRAPPPLSFSSSPPSPASSVS 1226
P G + PP PP+PA S
Sbjct: 827 EPA---GPSEPP-----GPPAPAGPAS 845
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 55.8 bits (133), Expect = 2e-07
Identities = 91/324 (28%), Positives = 126/324 (38%), Gaps = 55/324 (16%)
Query: 950 SPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITA---KASSE 1006
+P S+ + K PPPPPP S SG + G KE T + SE
Sbjct: 853 TPRSQSFALRARRKGPPPPPPKRLSSV---SGPSPEPPPLDESPGPKEGATGPRRRTLSE 909
Query: 1007 DAGPS-------PQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQG 1059
AGPS P A+ EEP P P + SS + EEG+ + +
Sbjct: 910 PAGPSEPPGPPAPAGPASDTEEEEPG----PEGTPPSRGSSGEGLPFAEEGNLTIKQRPK 965
Query: 1060 SSGAPQTSRMPVPM----------SAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGG 1109
+G P PVP + K RP ++ Q+ L A G A + G
Sbjct: 966 PAG-PPPRETPVPPGLDFNLTESDTVKRRPKCREREPLQTAL-------LAFGVASATPG 1017
Query: 1110 DFKP-TSP----SLPASKIPALSPSSGKSSSLPSSSGDSSNL--PNPPATKPSIASNPLS 1162
P SP S PAS +P PSS + +P+ S + P PP P + S+ S
Sbjct: 1018 PAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAAS 1077
Query: 1163 ---PQTGPPAHSASLIPSVSNGSL-KFQSLTHTGKGHHLSFS-PQSQNGRAPPPLSFSSS 1217
+T PPA A+L+ G+ K S+ T L+FS P+ P P+
Sbjct: 1078 RWNGETEPPAAPAALLKVPGAGTAPKPVSVACT----QLAFSGPKLAPRLGPRPV----P 1129
Query: 1218 PPSPASSVSLNQGAKGTRTIHTPS 1241
PP P S+ ++ G R T S
Sbjct: 1130 PPRPESTGTVGPGQAQQRLEQTSS 1153
Score = 37.0 bits (84), Expect = 0.12
Identities = 74/327 (22%), Positives = 110/327 (33%), Gaps = 46/327 (14%)
Query: 909 KLLEEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLEKLGGKSPPPP 968
+L + + ++ + N E P GP + + SE SP E GG P P
Sbjct: 638 RLAKGPELMAIEGLENGEGPATAGPR------LLTFQGSELSP--ELQAAMAGGGPEPLP 689
Query: 969 PPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTR----ATKYPAEEP 1024
PP R G + SG +E + S D P PQ R T+ P +
Sbjct: 690 LPPARSPSQESIGARSRGSGH-----SQEQPAPQPSGGDPSP-PQERNLPEGTERPPKLC 743
Query: 1025 ASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDK 1084
+S PPP + G A S A + P P K R +L +
Sbjct: 744 SSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSR 803
Query: 1085 PGKQSKLQDPRQYRQANGSAKKSGGDF-----KPTSPSLPASKIPALSPSSGKSSSLPSS 1139
PG + +A G + G + +P +L + P+++P+ + + S
Sbjct: 804 PGPTEGDAEG----EAEGPVGSTLGSYATLTRRPGRSALVRTS-PSVTPTPARGTPRSQS 858
Query: 1140 SGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1199
+ PP P S+ P PP S P G+ TG
Sbjct: 859 FALRARRKGPPPPPPKRLSSVSGPSPEPPPLDES--PGPKEGA--------TGPRRRTLS 908
Query: 1200 SPQSQNGRAPPPLSFSSSPPSPASSVS 1226
P G + PP PP+PA S
Sbjct: 909 EPA---GPSEPP-----GPPAPAGPAS 927
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 55.5 bits (132), Expect = 3e-07
Identities = 82/321 (25%), Positives = 119/321 (37%), Gaps = 58/321 (18%)
Query: 927 MPPATGP--LPRGDAPVDKVELSEDS------PNSEQDLEKLGGKSP----PPPPPPPRR 974
+PP G +P G P + +E S P+S LE+ G SP PP P P
Sbjct: 527 LPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQ--GPSPGDGSPPKPKDPVS 584
Query: 975 SYLPGSGLTTTRSGDVVYTGRKENITAKASSE--------DAGPSPQT--RATKYPAEEP 1024
+ +P G R+ + +G+ + A S + AGPSP T RA K PA P
Sbjct: 585 AAVPAPG----RNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAP 640
Query: 1025 ASAWTPSP-PPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLD 1083
P P P SSS + K P S P PG
Sbjct: 641 PKPGNPPPGHPGGQSSSGTSQHPPSLSPK----------PPTRSPSPPTQHTGQPPG--- 687
Query: 1084 KPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSS---GKSSSLPSSS 1140
+P S+L PR+Y ++ + + P P A+ + P+S +LPS
Sbjct: 688 QPSAPSQLSAPRRY--SSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEH 745
Query: 1141 GDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFS 1200
G L P T P + P +P G S +++ G+ + + H G
Sbjct: 746 G----LEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPE-TAQPHAGTLPRPRPV 800
Query: 1201 PQSQNGRAPPPLSFSSSPPSP 1221
P+ +N + PP PP P
Sbjct: 801 PKPRNRPSVPP------PPQP 815
Score = 41.6 bits (96), Expect = 0.005
Identities = 63/293 (21%), Positives = 94/293 (32%), Gaps = 45/293 (15%)
Query: 966 PPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPA 1025
PP PP + +P +S + + + A + GPSP + P ++P
Sbjct: 525 PPLPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKP-KDPV 583
Query: 1026 SAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKP 1085
SA P+P + + + + + Q S G P + P P + + + KP
Sbjct: 584 SAAVPAPGRNNSQIASGQNQPQAAA----GSHQLSMGQPHNAAGPSPHTLRR---AVKKP 636
Query: 1086 GKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSN 1145
P P P P SSG S PS S
Sbjct: 637 AP------------------------APPKPGNPPPGHPGGQSSSGTSQHPPSLS----- 667
Query: 1146 LPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQN 1205
P PP PS P + TG P S +S SL+ +H P +Q
Sbjct: 668 -PKPPTRSPS----PPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ- 721
Query: 1206 GRAPPPLSFSSSPPSPASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPS 1258
A P + + P + ++L + HTP T K PS
Sbjct: 722 --ATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPS 772
Score = 40.8 bits (94), Expect = 0.008
Identities = 61/235 (25%), Positives = 85/235 (36%), Gaps = 28/235 (11%)
Query: 1037 TSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPV-PMSAKNRPGTLDKPGKQSKLQDPR 1095
T + D E + MA ++G ++ + + A R GTL++ Q P
Sbjct: 468 TGNDSDSGTLERKRPASMAVMEGDLVKKESFGVKLMDFQAHRRGGTLNRKHISPAFQPPL 527
Query: 1096 QYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPS 1155
G P P P A S S G ++PSS+G P+P P
Sbjct: 528 P--------PTDGSTVVPAGPEPPPQSSRAESSSGG--GTVPSSAGILEQGPSPGDGSPP 577
Query: 1156 IASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF-SPQSQNGRAPPPLSF 1214
+P+S P + S I S N Q G H LS P + G +P L
Sbjct: 578 KPKDPVSAAVPAPGRNNSQIASGQN-----QPQAAAG-SHQLSMGQPHNAAGPSPHTLRR 631
Query: 1215 SSSPPSPASSVSLN--------QGAKGTRTIHTPSLTSYKAQNGSSSKATPSTAK 1261
+ P+PA N Q + GT + H PSL S K S S T T +
Sbjct: 632 AVKKPAPAPPKPGNPPPGHPGGQSSSGT-SQHPPSL-SPKPPTRSPSPPTQHTGQ 684
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 186 PAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS--TAHPPHAIPNSPPSTPVPHSM 243
P A NH P L++ + + G P P + + H ++PP TP P S
Sbjct: 707 PIQAPNHPPPQ---PPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPST 763
Query: 244 PPSPSRIP--------YGGTRSMVVPGNATIPRDRISSLPVSRPISPSP 284
PP + P GG P T+PR R P +RP P P
Sbjct: 764 PPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 812
Score = 31.2 bits (69), Expect = 6.6
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 22/110 (20%)
Query: 186 PAHAFNHTPKTMNGDMRMQRELVYARGDGP-----GAPRPGSTAHPPHAIPNSP---PST 237
P +A +P T+ ++ G+ P G G++ HPP P P PS
Sbjct: 618 PHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSP 677
Query: 238 PVPHS--MPPSPSRIPYGGTRSMVVPGNATIPRDRISSL-PVSRPISPSP 284
P H+ P PS P + PR SSL P+ P P P
Sbjct: 678 PTQHTGQPPGQPS-----------APSQLSAPRRYSSSLSPIQAPNHPPP 716
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 55.1 bits (131), Expect = 4e-07
Identities = 80/325 (24%), Positives = 118/325 (36%), Gaps = 46/325 (14%)
Query: 912 EEAQANIMKSIPNLEMPPATGPLPRGDAPVDKVELSEDSPNSEQDLE-KLGGKSPPPPPP 970
EE + N+ ++ L P + G+ D L P S +E L K PP P
Sbjct: 444 EEVEFNVSEAFVPLTTPSSNHSFHTGNDS-DSGTLERKRPASMAVMEGDLVKKESPPKPK 502
Query: 971 PPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSE--------DAGPSPQT--RATKYP 1020
P + +P G R+ + +G+ + A S + AGPSP T RA K P
Sbjct: 503 DPVSAAVPAPG----RNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKP 558
Query: 1021 AEEPASAWTPSP-PPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKNRP 1079
A P P P P SSS + K P S P P
Sbjct: 559 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPK----------PPTRSPSPPTQHTGQPP 608
Query: 1080 GTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKPTSPSLPASKIPALSPSS---GKSSSL 1136
G +P S+L PR+Y ++ + + P P A+ + P+S +L
Sbjct: 609 G---QPSAPSQLSAPRRY--SSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMAL 663
Query: 1137 PSSSGDSSNLPNPPATKPSIASNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHH 1196
PS G L P T P + P +P G S +++ G+ + + H G
Sbjct: 664 PSEHG----LEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPE-TAQPHAGTLPR 718
Query: 1197 LSFSPQSQNGRAPPPLSFSSSPPSP 1221
P+ +N + PP PP P
Sbjct: 719 PRPVPKPRNRPSVPP------PPQP 737
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 186 PAHAFNHTPKTMNGDMRMQRELVYARGDGPGAPRPGS--TAHPPHAIPNSPPSTPVPHSM 243
P A NH P L++ + + G P P + + H ++PP TP P S
Sbjct: 629 PIQAPNHPPPQ---PPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPST 685
Query: 244 PPSPSRIP--------YGGTRSMVVPGNATIPRDRISSLPVSRPISPSP 284
PP + P GG P T+PR R P +RP P P
Sbjct: 686 PPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 734
Score = 32.3 bits (72), Expect = 2.9
Identities = 47/217 (21%), Positives = 75/217 (34%), Gaps = 18/217 (8%)
Query: 1049 EGDKIMAELQGSSGAPQTSRMPVP-------MSAKNRPGTLDKPGKQSKLQDPRQYRQAN 1101
EGD + E P ++ +P P S +N+P +L + + A
Sbjct: 489 EGDLVKKESPPKPKDPVSAAVPAPGRNNSQIASGQNQP---QAAAGSHQLSMGQPHNAAG 545
Query: 1102 GSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPL 1161
S K +P+ P P G+SSS G S + P+ P+ + +P
Sbjct: 546 PSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSS-----GTSQHPPSLSPKPPTRSPSPP 600
Query: 1162 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1221
+ TG P S +S SL+ +H P +Q A P + + P
Sbjct: 601 TQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ---ATPLMHTKPNSQGP 657
Query: 1222 ASSVSLNQGAKGTRTIHTPSLTSYKAQNGSSSKATPS 1258
+ ++L + HTP T K PS
Sbjct: 658 PNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPS 694
Score = 31.2 bits (69), Expect = 6.6
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 22/110 (20%)
Query: 186 PAHAFNHTPKTMNGDMRMQRELVYARGDGP-----GAPRPGSTAHPPHAIPNSP---PST 237
P +A +P T+ ++ G+ P G G++ HPP P P PS
Sbjct: 540 PHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSP 599
Query: 238 PVPHS--MPPSPSRIPYGGTRSMVVPGNATIPRDRISSL-PVSRPISPSP 284
P H+ P PS P + PR SSL P+ P P P
Sbjct: 600 PTQHTGQPPGQPS-----------APSQLSAPRRYSSSLSPIQAPNHPPP 638
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.125 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,771,295
Number of Sequences: 37866
Number of extensions: 3403758
Number of successful extensions: 38919
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 1831
Number of HSP's that attempted gapping in prelim test: 23386
Number of HSP's gapped (non-prelim): 13281
length of query: 1264
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1150
effective length of database: 13,930,794
effective search space: 16020413100
effective search space used: 16020413100
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.