Guide to the Human Genome
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Name: DMXL1 Sequence: fasta or formatted (3027aa) NCBI GI: 148528998
Description:

Dmx-like 1

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3        192           2
 C cysteine            2.2         67           2
 D aspartate           5.4        163           5
 E glutamate           5.9        180           3
 F phenylalanine       4.1        124           2
 G glycine             5.0        152           3
 H histidine           3.5        105           2
 I isoleucine          4.6        139           2
 K lysine              5.3        160           3
 L leucine            11.3        341           3
 M methionine          1.9         59           2
 N asparagine          4.6        140           2
 P proline             4.7        143           2
 Q glutamine           4.3        129           2
 R arginine            3.9        118           3
 S serine             11.2        340           4
 T threonine           5.6        171           2
 V valine              5.7        174           2
 W tryptophan          1.7         52           2
 Y tyrosine            2.6         78           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Dmx-like 1 
DMXL2                 0.529   Dmx-like 2 
TBL3                  0.005   transducin beta-like 3 
WDR61                 0.005   WD repeat domain 61 
WDR51B                0.005   WD repeat domain 51B 
WDR51A                0.004   WD repeat domain 51A isoform 3 
WDR51A                0.004   WD repeat domain 51A isoform 2 
WDR51A                0.004   WD repeat domain 51A isoform 1 
TEP1                  0.004   telomerase-associated protein 1 
GNB1                  0.004   guanine nucleotide-binding protein, beta-1 subunit [...
TAF5                  0.004   TBP-associated factor 5 
WDR1                  0.004   WD repeat-containing protein 1 isoform 1 
GRWD1                 0.003   glutamate-rich WD repeat containing 1 
GNB3                  0.003   guanine nucleotide-binding protein, beta-3 subunit [H...
WDR48                 0.003   WD repeat domain 48 
COPB2                 0.003   coatomer protein complex, subunit beta 2 (beta prime)...
WDR69                 0.003   WD repeat domain 69 
COPA                  0.003   coatomer protein complex, subunit alpha isoform 1 [...
COPA                  0.003   coatomer protein complex, subunit alpha isoform 2 [...
WDR5B                 0.003   WD repeat domain 5B 
GNB4                  0.003   guanine nucleotide-binding protein, beta-4 subunit [...
TBL1XR1               0.003   transducin (beta)-like 1 X-linked receptor 1 
PLRG1                 0.003   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
WDR3                  0.003   WD repeat-containing protein 3 
WDR47                 0.003   WD repeat domain 47 isoform 3 
WDR47                 0.003   WD repeat domain 47 isoform 1 
WDR47                 0.003   WD repeat domain 47 isoform 2 
KATNB1                0.003   katanin p80 subunit B 1 
APAF1                 0.003   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.003   apoptotic peptidase activating factor 1 isoform c [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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