Guide to the Human Genome
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Name: TBL1XR1 Sequence: fasta or formatted (514aa) NCBI GI: 19913371
Description:

transducin (beta)-like 1 X-linked receptor 1

Referenced in:

Nuclear Receptors
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         50          11
 C cysteine            2.1         11           1
 D aspartate           6.8         35           2
 E glutamate           4.3         22           2
 F phenylalanine       3.3         17           1
 G glycine             8.0         41           2
 H histidine           3.3         17           1
 I isoleucine          5.8         30           2
 K lysine              4.5         23           2
 L leucine             7.0         36           2
 M methionine          1.6          8           2
 N asparagine          6.2         32           2
 P proline             3.5         18           2
 Q glutamine           4.7         24           3
 R arginine            2.9         15           1
 S serine              9.5         49           2
 T threonine           6.2         32           2
 V valine              6.2         32           2
 W tryptophan          2.5         13           1
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transducin (beta)-like 1 X-linked receptor 1 
TBL1X                 0.892   transducin beta-like 1X isoform b 
TBL1X                 0.892   transducin beta-like 1X isoform b 
TBL1X                 0.892   transducin beta-like 1X isoform a 
TBL1X                 0.892   transducin beta-like 1X isoform a 
TBL1Y                 0.866   transducin beta-like 1Y 
TBL1Y                 0.866   transducin beta-like 1Y 
TBL1Y                 0.866   transducin beta-like 1Y 
LOC100291233          0.195   PREDICTED: hypothetical protein XP_002346868 
LOC100287918          0.195   PREDICTED: hypothetical protein XP_002342710 
LOC100292902          0.134   PREDICTED: similar to transducin (beta)-like 1 X-li...
WDR69                 0.111   WD repeat domain 69 
WDR51B                0.106   WD repeat domain 51B 
WDR5                  0.099   WD repeat domain 5 
WDR5                  0.099   WD repeat domain 5 
NLE1                  0.097   Notchless gene homolog isoform a 
WDR5B                 0.096   WD repeat domain 5B 
CIAO1                 0.096   WD repeat domain 39 
TAF5                  0.095   TBP-associated factor 5 
WDR17                 0.092   WD repeat domain 17 isoform 2 
WDR17                 0.092   WD repeat domain 17 isoform 1 
WDR51A                0.089   WD repeat domain 51A isoform 2 
WDR51A                0.089   WD repeat domain 51A isoform 1 
PAFAH1B1              0.088   platelet-activating factor acetylhydrolase, isoform I...
FBXW7                 0.086   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.086   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.086   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR38                 0.083   WD repeat domain 38 
WDR51A                0.079   WD repeat domain 51A isoform 3 
PRPF4                 0.079   PRP4 pre-mRNA processing factor 4 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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