COPB2 30600

Name: COPB2	Sequence: fasta or formatted (906aa)		NCBI GI: 4758032
Description: coatomer protein complex, subunit beta 2 (beta prime)		Referenced in: ER, Golgi, and the Secretory Pathway WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 67 2 C cysteine 1.7 15 1 D aspartate 6.1 55 2 E glutamate 8.4 76 2 F phenylalanine 3.8 34 2 G glycine 5.8 53 2 H histidine 2.5 23 2 I isoleucine 5.7 52 3 K lysine 6.1 55 2 L leucine 9.7 88 4 M methionine 2.0 18 1 N asparagine 4.5 41 2 P proline 3.5 32 1 Q glutamine 4.1 37 2 R arginine 4.3 39 2 S serine 6.7 61 3 T threonine 4.9 44 2 V valine 7.2 65 3 W tryptophan 2.1 19 1 Y tyrosine 3.5 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coatomer protein complex, subunit beta 2 (beta prime)... COPA 0.138 coatomer protein complex, subunit alpha isoform 2 [... COPA 0.136 coatomer protein complex, subunit alpha isoform 1 [... PAFAH1B1 0.051 platelet-activating factor acetylhydrolase, isoform I... WDR51B 0.043 WD repeat domain 51B WDR69 0.042 WD repeat domain 69 FBXW11 0.041 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.041 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.041 F-box and WD repeat domain containing 11 isoform B [... FBXW7 0.041 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.041 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.041 F-box and WD repeat domain containing 7 isoform 2 [H... WDR51A 0.041 WD repeat domain 51A isoform 2 WDR51A 0.041 WD repeat domain 51A isoform 1 TAF5L 0.041 PCAF associated factor 65 beta isoform a SPAG16 0.040 sperm associated antigen 16 isoform 1 WDR5 0.040 WD repeat domain 5 WDR5 0.040 WD repeat domain 5 WDR51A 0.039 WD repeat domain 51A isoform 3 BTRC 0.039 beta-transducin repeat containing protein isoform 2 [... BTRC 0.039 beta-transducin repeat containing protein isoform 1 ... TAF5 0.038 TBP-associated factor 5 WDR5B 0.037 WD repeat domain 5B KATNB1 0.036 katanin p80 subunit B 1 UTP15 0.035 UTP15, U3 small nucleolar ribonucleoprotein, homolog... WDR86 0.034 WD repeat domain 86 PLRG1 0.034 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR38 0.033 WD repeat domain 38 GNB2L1 0.032 guanine nucleotide binding protein (G protein), beta ... SNRNP40 0.032 WD repeat domain 57 (U5 snRNP specific) Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.