Guide to the Human Genome
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Name: DMXL2 Sequence: fasta or formatted (3036aa) NCBI GI: 119120894
Description:

Dmx-like 2

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5        196           2
 C cysteine            2.0         62           2
 D aspartate           6.0        182           2
 E glutamate           6.1        185           5
 F phenylalanine       3.5        107           2
 G glycine             5.3        160           3
 H histidine           4.1        123           2
 I isoleucine          5.1        155           2
 K lysine              5.2        159           3
 L leucine            10.1        306           3
 M methionine          2.0         61           2
 N asparagine          4.1        123           3
 P proline             5.0        151           3
 Q glutamine           4.4        133           2
 R arginine            4.4        135           3
 S serine             10.0        303           4
 T threonine           5.4        165           3
 V valine              6.6        199           2
 W tryptophan          1.7         51           2
 Y tyrosine            2.6         80           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Dmx-like 2 
DMXL1                 0.525   Dmx-like 1 
WDR51A                0.006   WD repeat domain 51A isoform 3 
WDR51A                0.006   WD repeat domain 51A isoform 2 
WDR51A                0.006   WD repeat domain 51A isoform 1 
TBL3                  0.006   transducin beta-like 3 
WDR51B                0.005   WD repeat domain 51B 
GNB2                  0.005   guanine nucleotide-binding protein, beta-2 subunit [...
KATNB1                0.005   katanin p80 subunit B 1 
GNB1                  0.005   guanine nucleotide-binding protein, beta-1 subunit [...
EML6                  0.005   echinoderm microtubule associated protein like 6 [H...
TEP1                  0.005   telomerase-associated protein 1 
WDR61                 0.004   WD repeat domain 61 
SNRNP40               0.004   WD repeat domain 57 (U5 snRNP specific) 
TAF5                  0.004   TBP-associated factor 5 
GNB3                  0.004   guanine nucleotide-binding protein, beta-3 subunit [H...
WDR47                 0.004   WD repeat domain 47 isoform 3 
WDR47                 0.004   WD repeat domain 47 isoform 1 
WDR47                 0.004   WD repeat domain 47 isoform 2 
WDR6                  0.004   WD repeat domain 6 protein 
WDR87                 0.004   NYD-SP11 protein 
GNB2L1                0.004   guanine nucleotide binding protein (G protein), beta ...
WDR5                  0.004   WD repeat domain 5 
WDR5                  0.004   WD repeat domain 5 
WDR3                  0.004   WD repeat-containing protein 3 
WDFY2                 0.004   WD repeat and FYVE domain containing 2 
GRWD1                 0.004   glutamate-rich WD repeat containing 1 
GNB4                  0.004   guanine nucleotide-binding protein, beta-4 subunit [...
GNB5                  0.004   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.004   guanine nucleotide-binding protein, beta-5 subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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