Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148271100
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
(492 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens] 1024 0.0
gi|147905620 PR domain containing 9 [Homo sapiens] 728 0.0
gi|41349478 PR domain containing 7 isoform 2 [Homo sapiens] 244 2e-64
gi|41349466 PR domain containing 11 [Homo sapiens] 155 1e-37
gi|41349474 PR domain containing 4 [Homo sapiens] 89 1e-17
gi|13375636 PR domain containing 14 [Homo sapiens] 87 3e-17
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens] 87 5e-17
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 86 8e-17
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 86 8e-17
gi|208022698 retinoblastoma protein-binding zinc finger protein ... 86 1e-16
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi... 84 4e-16
gi|210031233 PR domain containing 6 [Homo sapiens] 84 4e-16
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa... 84 4e-16
gi|15042949 PR domain containing 12 [Homo sapiens] 83 7e-16
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ... 82 1e-15
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap... 82 1e-15
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens] 82 1e-15
gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens] 80 4e-15
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap... 75 1e-13
gi|172072684 PR domain containing 1, with ZNF domain isoform 1 [... 75 1e-13
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens] 75 1e-13
gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens] 74 3e-13
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap... 71 2e-12
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens] 69 7e-12
gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens] 69 7e-12
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens] 69 7e-12
gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens] 69 7e-12
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap... 69 1e-11
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap... 69 1e-11
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap... 64 3e-10
>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
Length = 492
Score = 1024 bits (2648), Expect = 0.0
Identities = 492/492 (100%), Positives = 492/492 (100%)
Query: 1 MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA 60
MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA
Sbjct: 1 MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA 60
Query: 61 LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP 120
LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP
Sbjct: 61 LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP 120
Query: 121 KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKM 180
KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKM
Sbjct: 121 KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKM 180
Query: 181 YSLRERKGHAYKEISEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL 240
YSLRERKGHAYKEISEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL
Sbjct: 181 YSLRERKGHAYKEISEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL 240
Query: 241 SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRN 300
SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRN
Sbjct: 241 SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRN 300
Query: 301 CYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDE 360
CYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDE
Sbjct: 301 CYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDE 360
Query: 361 YGQELGIRSSIEPAESLGQAVNCWSGMGMSMARNWASSGAASGRKSSWQGENQSQRSIHV 420
YGQELGIRSSIEPAESLGQAVNCWSGMGMSMARNWASSGAASGRKSSWQGENQSQRSIHV
Sbjct: 361 YGQELGIRSSIEPAESLGQAVNCWSGMGMSMARNWASSGAASGRKSSWQGENQSQRSIHV 420
Query: 421 PHAVWPFQVKNFSVNMWNAITPLRTSQDHLQENFSNQRIPAQGIRIRSGNILIHAAVMTK 480
PHAVWPFQVKNFSVNMWNAITPLRTSQDHLQENFSNQRIPAQGIRIRSGNILIHAAVMTK
Sbjct: 421 PHAVWPFQVKNFSVNMWNAITPLRTSQDHLQENFSNQRIPAQGIRIRSGNILIHAAVMTK 480
Query: 481 PKVKRSKKGPNS 492
PKVKRSKKGPNS
Sbjct: 481 PKVKRSKKGPNS 492
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 728 bits (1880), Expect = 0.0
Identities = 347/368 (94%), Positives = 355/368 (96%)
Query: 1 MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA 60
MSPE+SQEESPE DTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVK NYNA
Sbjct: 1 MSPEKSQEESPEEDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNA 60
Query: 61 LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP 120
LIT+GLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMA R EQ KHQKGMP
Sbjct: 61 LITIGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMALRVEQRKHQKGMP 120
Query: 121 KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKM 180
KASF+NESSL+ELS T NLLN S SEQAQKPVSP GEASTSGQHSRLKLELR+KETE KM
Sbjct: 121 KASFSNESSLKELSRTANLLNASGSEQAQKPVSPSGEASTSGQHSRLKLELRKKETERKM 180
Query: 181 YSLRERKGHAYKEISEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL 240
YSLRERKGHAYKE+SEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL
Sbjct: 181 YSLRERKGHAYKEVSEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL 240
Query: 241 SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRN 300
SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAAN+GYSWLITKGRN
Sbjct: 241 SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANNGYSWLITKGRN 300
Query: 301 CYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDE 360
CYEYVDGKDKS ANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVW GDE
Sbjct: 301 CYEYVDGKDKSWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGDE 360
Query: 361 YGQELGIR 368
YGQELGI+
Sbjct: 361 YGQELGIK 368
>gi|41349478 PR domain containing 7 isoform 2 [Homo sapiens]
Length = 171
Score = 244 bits (622), Expect = 2e-64
Identities = 117/138 (84%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Query: 207 MCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNEASD 266
MCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNEASD
Sbjct: 1 MCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNEASD 60
Query: 267 LPLGLHFGPYEGRITEDEEAANSGYSWLITKGRNCYEYVDGKDKSSANWMRYVNCARDDE 326
LPLGLHFGPYEGRITEDEEAANSGYSWLITKGRNCYEYVDGKDKSSANWMR ARD
Sbjct: 61 LPLGLHFGPYEGRITEDEEAANSGYSWLITKGRNCYEYVDGKDKSSANWMR--TKARDPS 118
Query: 327 EQNLVAFQYHRQIFYRTC 344
+++ + +I TC
Sbjct: 119 MSLMLSGLFKSKISQSTC 136
>gi|41349466 PR domain containing 11 [Homo sapiens]
Length = 511
Score = 155 bits (391), Expect = 1e-37
Identities = 73/168 (43%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
Query: 198 QDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAG 257
Q D+ +CE CQ +F+D C HGPP FV D+ V G P+R+AL++P G+ + ++
Sbjct: 103 QQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESD 162
Query: 258 LGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRNCYEYVDGKDKSSANWMR 317
+ NE +P G FGPYEG+I+ +++A +SWLI N Y+ +DG D++ ANWMR
Sbjct: 163 VRCVNEV--IPKGHIFGPYEGQISTQDKSAGF-FSWLIVDKNNRYKSIDGSDETKANWMR 219
Query: 318 YVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQEL 365
YV +R++ EQNL+AFQ+ +I++R CR IRPG L VW ++Y + L
Sbjct: 220 YVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRL 267
>gi|41349474 PR domain containing 4 [Homo sapiens]
Length = 801
Score = 88.6 bits (218), Expect = 1e-17
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 203 LYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWN 262
++C +C + C HGP TFV D+ ++ +R+ LSLP L + S I A +GVW
Sbjct: 375 IWCTLCDRAYPSDCPEHGPVTFVPDTPIE----SRARLSLPKQLVLRQS-IVGAEVGVWT 429
Query: 263 EASDLPLGLHFGPYEGRITEDEEAAN-----SGYSWLITKGRNCYEYVDGKDKSSANWMR 317
+P+ FGP G+ + E A + W I + D++ NWM
Sbjct: 430 -GETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTDENECNWMM 488
Query: 318 YVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQELGI 367
+V AR+ EEQNLVA+ + +IF+ T + I P ELL + +Y Q++G+
Sbjct: 489 FVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQQIGV 538
>gi|13375636 PR domain containing 14 [Homo sapiens]
Length = 571
Score = 87.0 bits (214), Expect = 3e-17
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 236 NRSALSLPPGLRIGPS---GIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYS 292
++ +L LP GL + + +P G+ +S + G+ FGP++G++ E G +
Sbjct: 243 DKDSLQLPEGLCLMQTVFGEVPHFGVFC---SSFIAKGVRFGPFQGKVVNASEVKTYGDN 299
Query: 293 ---WLITKGRNCYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRP 349
W I + + ++DGK + NWM YVNCAR +EQNLVA Q IFY +C+ I
Sbjct: 300 SVMWEIFEDGHLSHFIDGKG-GTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQ 358
Query: 350 GCELLVWSGDEYGQELGIRSSIEPAE 375
ELLVW GD Y + L I S++ E
Sbjct: 359 NQELLVWYGDCYEKFLDIPVSLQVTE 384
>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
Length = 188
Score = 86.7 bits (213), Expect = 5e-17
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 1 MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA 60
M+ + + + P D + +E++ AF DI+ YF+K+EW +M EK Y +K NY A
Sbjct: 1 MNGDDTFAKRPRDDAKASEKR---SKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKA 57
Query: 61 LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP 120
+ +G + T P FMC+ +QA Q D D + R QV+ P M F K MP
Sbjct: 58 MTKLGFKVTLPPFMCN-KQATDFQ---GNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMP 113
Query: 121 KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGK- 179
K +E+ + +S S + K + PPG+A+ S K+ R GK
Sbjct: 114 KKPAEDENDSKGVS------EASGPQNDGKQLHPPGKANISE-----KINKRSGPKRGKH 162
Query: 180 --MYSLRERKGHA-YKEISEPQDDD 201
+ LRERK Y+EIS+P++DD
Sbjct: 163 AWTHRLRERKQLVIYEEISDPEEDD 187
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 85.9 bits (211), Expect = 8e-17
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 235 PNRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWL 294
P LP +R+ PS + + +GVW L G FGP+ G + + N+ Y W
Sbjct: 19 PEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILK-GKKFGPFVGDKKKRSQVKNNVYMWE 77
Query: 295 ITKGRNCYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELL 354
+ + +D D NW+RYVN A EEQNL + +R I+Y+T + I PG ELL
Sbjct: 78 VYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELL 137
Query: 355 VWSGDEYGQELGIRSSIEPAESLGQAVNCWSGMGMSMARNWASSGAASGRKSSWQGENQS 414
VW E E+ E A + + +S + G+K S + +N+
Sbjct: 138 VWYNGEDNPEIAAAIEEERASARSKR---------------SSPKSRKGKKKSQENKNKG 182
Query: 415 QR 416
+
Sbjct: 183 NK 184
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 85.9 bits (211), Expect = 8e-17
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 235 PNRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWL 294
P LP +R+ PS + + +GVW L G FGP+ G + + N+ Y W
Sbjct: 19 PEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILK-GKKFGPFVGDKKKRSQVKNNVYMWE 77
Query: 295 ITKGRNCYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELL 354
+ + +D D NW+RYVN A EEQNL + +R I+Y+T + I PG ELL
Sbjct: 78 VYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELL 137
Query: 355 VWSGDEYGQELGIRSSIEPAESLGQAVNCWSGMGMSMARNWASSGAASGRKSSWQGENQS 414
VW E E+ E A + + +S + G+K S + +N+
Sbjct: 138 VWYNGEDNPEIAAAIEEERASARSKR---------------SSPKSRKGKKKSQENKNKG 182
Query: 415 QR 416
+
Sbjct: 183 NK 184
>gi|208022698 retinoblastoma protein-binding zinc finger protein
isoform d [Homo sapiens]
Length = 226
Score = 85.5 bits (210), Expect = 1e-16
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 235 PNRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWL 294
P LP +R+ PS + + +GVW L G FGP+ G + + N+ Y W
Sbjct: 19 PEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILK-GKKFGPFVGDKKKRSQVKNNVYMWE 77
Query: 295 ITKGRNCYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELL 354
+ + +D D NW+RYVN A EEQNL + +R I+Y+T + I PG ELL
Sbjct: 78 VYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELL 137
Query: 355 VWSGDEYGQELGIRSSIEPAES 376
VW E E+ E A +
Sbjct: 138 VWYNGEDNPEIAAAIEEERASA 159
>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
sapiens]
Length = 188
Score = 83.6 bits (205), Expect = 4e-16
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 11 PEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATR 70
P D + +E+ ++ AF DI+ YF+K+EW +M EK Y +K+NY + +G + T
Sbjct: 11 PRDDAQISEK---LRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTL 67
Query: 71 PAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMPKASFNNESSL 130
P FM +R A D D + R QV+ P M F Q K MPK E+ L
Sbjct: 68 PPFMRSKRAADFHGNDFGNDRNH----RNQVERPQMTFGSLQRIFPKIMPKKPAEEENGL 123
Query: 131 RELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKG-H 189
+E+ S + K + PPG ST + ++ R K + LRERK
Sbjct: 124 KEVP------EASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGK--HAWTHRLRERKQLV 175
Query: 190 AYKEISEPQDDD 201
Y+EIS+P++DD
Sbjct: 176 VYEEISDPEEDD 187
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 83.6 bits (205), Expect = 4e-16
Identities = 79/276 (28%), Positives = 116/276 (42%), Gaps = 38/276 (13%)
Query: 205 CEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLR-----------IGPSGI 253
C+MC + C HGP ++ G + +A + PP L + S +
Sbjct: 199 CDMCADNRNGECPMHGPLHSLRRLV---GTSSAAAAAPPPELPEWLRDLPREVCLCTSTV 255
Query: 254 PQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAA-----NSGYSWLI-TKGRNCYEYVDG 307
P G+ A + G GP++G + E+ N+ + W I + ++DG
Sbjct: 256 PGLAYGIC-AAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDG 314
Query: 308 KDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQELGI 367
+ S ++WMRY+ CAR EQNL QY IFYR C I G ELLVW D Y GI
Sbjct: 315 GEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGI 374
Query: 368 RSSIEPAESLGQ--AVNCWSGMGMSMARNWASSGAASGRKSSWQGENQSQRSIHVPHAVW 425
P + + Q +N S + +M R KSS QRS+ P
Sbjct: 375 -----PLQCIAQDENLNVPSTVMEAMCR---QDALQPFNKSSKLAPTTQQRSVVFPQTPC 426
Query: 426 PFQVKNFSVNMWNAITPLRTSQDHLQENFSNQRIPA 461
+NFS + + P+ + + Q N NQR+ A
Sbjct: 427 S---RNFS--LLDKSGPIESGFN--QINVKNQRVLA 455
>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
sapiens]
Length = 188
Score = 83.6 bits (205), Expect = 4e-16
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 11 PEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATR 70
P D + +E+ ++ AF DI+ YF+K+EW +M EK Y +K+NY + +G + T
Sbjct: 11 PRDDAQISEK---LRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTL 67
Query: 71 PAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMPKASFNNESSL 130
P FM +R A D D + R QV+ P M F Q K MPK E+ L
Sbjct: 68 PPFMRSKRAADFHGNDFGNDRNH----RNQVERPQMTFGSLQRIFPKIMPKKPAEEENGL 123
Query: 131 RELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKG-H 189
+E+ S + K + PPG ST + ++ R K + LRERK
Sbjct: 124 KEVP------EASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGK--HAWTHRLRERKQLV 175
Query: 190 AYKEISEPQDDD 201
Y+EIS+P++DD
Sbjct: 176 VYEEISDPEEDD 187
>gi|15042949 PR domain containing 12 [Homo sapiens]
Length = 367
Score = 82.8 bits (203), Expect = 7e-16
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 238 SALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEA---ANSGYSWL 294
S+L LP + I S IP GLG++++ + G GP+ GR+ E N+ W
Sbjct: 80 SSLVLPAEVIIAQSSIPGEGLGIFSKTW-IKAGTEMGPFTGRVIAPEHVDICKNNNLMWE 138
Query: 295 ITKGRNCYEY-VDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCEL 353
+ Y +D + +WM Y+ CAR+++EQNL Q IFY+ +I P EL
Sbjct: 139 VFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQEL 198
Query: 354 LVWSGDEYGQELGI 367
LVW G+ + LGI
Sbjct: 199 LVWYGNSHNTFLGI 212
>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
sapiens]
Length = 188
Score = 82.0 bits (201), Expect = 1e-15
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 29/187 (15%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +AT P FMC++R
Sbjct: 21 IQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKR----- 75
Query: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPK---ASFNNESSLRELSGTPN 138
+D + +D + P + QV+ P M F Q K MPK N+ + E SG N
Sbjct: 76 -AEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQN 134
Query: 139 LLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGK---MYSLRERKGHA-YKEI 194
K + PPG+ +TS K+ R G+ + LRERK Y+EI
Sbjct: 135 ---------DGKELCPPGKPTTSE-----KIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 195 SEPQDDD 201
S+P++DD
Sbjct: 181 SDPEEDD 187
>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
sapiens]
Length = 188
Score = 82.0 bits (201), Expect = 1e-15
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 29/187 (15%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +AT P FMC++R
Sbjct: 21 IQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKR----- 75
Query: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPK---ASFNNESSLRELSGTPN 138
+D + +D + P + QV+ P M F Q K MPK N+ + E SG N
Sbjct: 76 -AEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQN 134
Query: 139 LLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGK---MYSLRERKGHA-YKEI 194
K + PPG+ +TS K+ R G+ + LRERK Y+EI
Sbjct: 135 ---------DGKELCPPGKPTTSE-----KIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 195 SEPQDDD 201
S+P++DD
Sbjct: 181 SDPEEDD 187
>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
Length = 188
Score = 81.6 bits (200), Expect = 1e-15
Identities = 65/181 (35%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ +F DI+ YF+K+EW +M EK Y +K Y A+ +G +AT P FM H A L
Sbjct: 21 IQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTKLGFKATLPPFM-HNTGATDL 79
Query: 84 QVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMPK--ASFNNESSLRELSGTPNLLN 141
Q D D + QV+ P M F Q K MPK A N+S G P
Sbjct: 80 Q---GNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEGNDS-----KGVP---E 128
Query: 142 TSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDD 200
S S+ K + PPG+ STS + ++ R K + LRERK Y+EIS+P++D
Sbjct: 129 ASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGK--HAWTHRLRERKQLVIYEEISDPEED 186
Query: 201 D 201
D
Sbjct: 187 D 187
>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
Length = 188
Score = 80.1 bits (196), Expect = 4e-15
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+K+EW +M EK Y +K Y A+ +G +AT P FMC+ A L
Sbjct: 21 IQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTKLGFKATLPPFMCN-TGATDL 79
Query: 84 QVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLNTS 143
Q D D + R QV+ M F Q K MPK + +E+ L N
Sbjct: 80 Q---GNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVPEASGLQNDG 136
Query: 144 DSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDDD 201
K + PPG+ +TS + ++ R K + LRERK Y+EIS+P++DD
Sbjct: 137 ------KQLCPPGKPTTSEKINKASGPKRGK--HAWTHRLRERKQLVIYEEISDPEEDD 187
>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
sapiens]
Length = 188
Score = 75.5 bits (184), Expect = 1e-13
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +A P+FM ++R
Sbjct: 21 IQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKR----- 75
Query: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLN 141
V D + +D + P + QV+ P M F Q K MPK + +E+
Sbjct: 76 -VTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVP------E 128
Query: 142 TSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDD 200
S + K + PPG+ +TS + + + R + + LRERK Y+EIS+P++D
Sbjct: 129 ASGPQNDGKQLCPPGKPTTSEKINMISGPKRGE--HAWTHRLRERKQLVIYEEISDPEED 186
Query: 201 D 201
D
Sbjct: 187 D 187
>gi|172072684 PR domain containing 1, with ZNF domain isoform 1
[Homo sapiens]
Length = 825
Score = 75.1 bits (183), Expect = 1e-13
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 227 DSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEA 286
DS D G ++ SLP L + + +GV ++ +P G FGP G I ++
Sbjct: 68 DSGADGGTSVQAEASLPRNLLFKYATNSEEVIGVMSKEY-IPKGTRFGPLIGEIYTNDTV 126
Query: 287 ---ANSGYSWLITKGRNCYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRT 343
AN Y W I + ++DG ++ +NWMRYVN A EQNL A Q I++ T
Sbjct: 127 PKNANRKYFWRIYSRGELHHFIDGFNEEKSNWMRYVNPAHSPREQNLAACQNGMNIYFYT 186
Query: 344 CRVIRPGCELLVWSGDEYGQEL 365
+ I ELLVW ++ + L
Sbjct: 187 IKPIPANQELLVWYCRDFAERL 208
>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
Length = 188
Score = 75.1 bits (183), Expect = 1e-13
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 1 MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA 60
M+ + + + P D + +E++ AF DI+ YF+KEEW +M EK ++K Y A
Sbjct: 1 MNGDDAFAKRPRDDAKASEKR---SKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEA 57
Query: 61 LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP 120
+ +G T FM ++R DSD + +V+ P M F Q K MP
Sbjct: 58 MTKLGFNVTLSLFMRNKRAT----DSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMP 113
Query: 121 KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGK- 179
E E S + + S + K + PPG+AS+S K+ R GK
Sbjct: 114 ------EKPAEEGSDSKGVPEASGPQNDGKKLCPPGKASSSE-----KIHERSGPKRGKH 162
Query: 180 --MYSLRERKGHA-YKEISEPQDDD 201
+ LRERK Y+EIS+P++DD
Sbjct: 163 AWTHRLRERKQLVIYEEISDPEEDD 187
>gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]
Length = 1178
Score = 73.9 bits (180), Expect = 3e-13
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 192 KEISEPQDDD-----YLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGL 246
+++SE +D +++CE C + C GP VKDS V +R+ SLPP L
Sbjct: 33 RQVSEMAEDGSEEIMFIWCEDCSQYHDSECPELGPVVMVKDSFV----LSRARSSLPPNL 88
Query: 247 RIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRN--CYEY 304
I + GV+ + L FGP+E R E ++ + K + C+
Sbjct: 89 EI--RRLEDGAEGVF-AITQLVKRTQFGPFESRRVAKWEKESAFPLKVFQKDGHPVCF-- 143
Query: 305 VDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQE 364
D ++ NWM V A + E QNL A+Q+ +++ T R I PG EL VW Y ++
Sbjct: 144 -DTSNEDDCNWMMLVRPAAEAEHQNLTAYQHGSDVYFTTSRDIPPGTELRVWYAAFYAKK 202
Query: 365 L 365
+
Sbjct: 203 M 203
>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
sapiens]
Length = 223
Score = 71.2 bits (173), Expect = 2e-12
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +AT P FMC++R
Sbjct: 21 IQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKR----- 75
Query: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPK---ASFNNESSLRELSGTPN 138
+D + +D + P + QV+ P M F Q K MPK N+ + E SG N
Sbjct: 76 -AEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQN 134
Query: 139 LLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHAYKEISE 196
K + PPG+ +TS ++ +E + K ER+G A++ S+
Sbjct: 135 ---------DGKELCPPGKPTTS---EKIHERSGNREAQEK----EERRGTAHRWSSQ 176
>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
Length = 1156
Score = 69.3 bits (168), Expect = 7e-12
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 197 PQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQA 256
P D L+CE C N C HGP + + V R+ SLP L I
Sbjct: 167 PFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPV----LTRARASLPLVLYI------DR 216
Query: 257 GLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLIT------KGRNCYE--YVDGK 308
LG +P FGP EG + E + ++ K R+ +E + +
Sbjct: 217 FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERDLHEDLWFELS 276
Query: 309 DKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQ 363
D++ NWM +V A++ EQNLVA+QY ++Y T + + P EL VW Y +
Sbjct: 277 DETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAE 331
>gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]
Length = 1023
Score = 69.3 bits (168), Expect = 7e-12
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 197 PQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQA 256
P D L+CE C N C HGP + + V R+ SLP L I
Sbjct: 81 PFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPV----LTRARASLPLVLYI------DR 130
Query: 257 GLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLIT------KGRNCYE--YVDGK 308
LG +P FGP EG + E + ++ K R+ +E + +
Sbjct: 131 FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERDLHEDLWFELS 190
Query: 309 DKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQ 363
D++ NWM +V A++ EQNLVA+QY ++Y T + + P EL VW Y +
Sbjct: 191 DETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAE 245
>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
Length = 1160
Score = 69.3 bits (168), Expect = 7e-12
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 197 PQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQA 256
P D L+CE C N C HGP + + V R+ SLP L I
Sbjct: 167 PFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPV----LTRARASLPLVLYI------DR 216
Query: 257 GLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLIT------KGRNCYE--YVDGK 308
LG +P FGP EG + E + ++ K R+ +E + +
Sbjct: 217 FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERDLHEDLWFELS 276
Query: 309 DKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQ 363
D++ NWM +V A++ EQNLVA+QY ++Y T + + P EL VW Y +
Sbjct: 277 DETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAE 331
>gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]
Length = 1061
Score = 69.3 bits (168), Expect = 7e-12
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 197 PQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQA 256
P D L+CE C N C HGP + + V R+ SLP L I
Sbjct: 81 PFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPV----LTRARASLPLVLYI------DR 130
Query: 257 GLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLIT------KGRNCYE--YVDGK 308
LG +P FGP EG + E + ++ K R+ +E + +
Sbjct: 131 FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERDLHEDLWFELS 190
Query: 309 DKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQ 363
D++ NWM +V A++ EQNLVA+QY ++Y T + + P EL VW Y +
Sbjct: 191 DETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAE 245
>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
sapiens]
Length = 188
Score = 68.9 bits (167), Expect = 1e-11
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+++EW +M EK Y +K Y A+ +G +AT P FM ++R
Sbjct: 21 MQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKR----- 75
Query: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLN 141
V D + +D + P + QV+ P M F Q K P E E + + +
Sbjct: 76 -VADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITP------EKPAEEGNDSKGVPE 128
Query: 142 TSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDD 200
S + K + P G+ +TS + ++ R K + +RERK Y+EIS+PQ+D
Sbjct: 129 ASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGK--HAWTHRVRERKQLVIYEEISDPQED 186
Query: 201 D 201
D
Sbjct: 187 D 187
>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
sapiens]
Length = 229
Score = 68.6 bits (166), Expect = 1e-11
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 27 AFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKLQVD 86
AF DI+ YF+++EW +M EK Y +K Y A+ +G +AT P FM ++R V
Sbjct: 65 AFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKR------VA 118
Query: 87 DTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLNTSD 144
D + +D + P + QV+ P M F Q K P E E + + + S
Sbjct: 119 DFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITP------EKPAEEGNDSKGVPEASG 172
Query: 145 SEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDDD 201
+ K + P G+ +TS + ++ R K + +RERK Y+EIS+PQ+DD
Sbjct: 173 PQNNGKQLRPSGKLNTSEKVNKTSGPKRGK--HAWTHRVRERKQLVIYEEISDPQEDD 228
>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
sapiens]
Length = 170
Score = 63.9 bits (154), Expect = 3e-10
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 24 VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83
++ AF DI+ YF+KEEW +M EK Y +K Y A+ +G +A P+FM ++R
Sbjct: 21 IQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKR----- 75
Query: 84 QVDDTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLN 141
V D + +D + P + QV+ P M F Q K MPK + +E+
Sbjct: 76 -VTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVP------E 128
Query: 142 TSDSEQAQKPVSPPGEASTSGQHSRLKLELRR 173
S + K + PPG+ +TS + + + L+R
Sbjct: 129 ASGPQNDGKQLCPPGKPTTSEKINMISGVLQR 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,529,946
Number of Sequences: 37866
Number of extensions: 1054595
Number of successful extensions: 3039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 2660
Number of HSP's gapped (non-prelim): 556
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.