SSX3 24805

Name: SSX3	Sequence: fasta or formatted (170aa)		NCBI GI: 28559009
Description: synovial sarcoma, X breakpoint 3 isoform b		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [188aa] synovial sarcoma, X breakpoint 3 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 8 1 C cysteine 1.2 2 1 D aspartate 5.3 9 2 E glutamate 6.5 11 2 F phenylalanine 5.9 10 1 G glycine 7.6 13 1 H histidine 0.0 0 0 I isoleucine 5.3 9 1 K lysine 11.2 19 2 L leucine 3.5 6 1 M methionine 4.7 8 1 N asparagine 5.3 9 1 P proline 8.2 14 2 Q glutamine 6.5 11 1 R arginine 6.5 11 2 S serine 4.7 8 1 T threonine 4.1 7 2 V valine 5.3 9 1 W tryptophan 0.6 1 1 Y tyrosine 2.9 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synovial sarcoma, X breakpoint 3 isoform b SSX3 0.911 synovial sarcoma, X breakpoint 3 isoform a SSX2B 0.801 PREDICTED: synovial sarcoma, X breakpoint 2B SSX2 0.801 synovial sarcoma, X breakpoint 2 isoform b SSX2 0.801 synovial sarcoma, X breakpoint 2 isoform a SSX5 0.752 synovial sarcoma, X breakpoint 5 isoform b SSX9 0.749 synovial sarcoma, X breakpoint 9 SSX7 0.731 synovial sarcoma, X breakpoint 7 SSX5 0.691 synovial sarcoma, X breakpoint 5 isoform a SSX4 0.685 synovial sarcoma, X breakpoint 4 isoform a SSX4B 0.685 synovial sarcoma, X breakpoint 4B isoform a SSX6 0.639 synovial sarcoma, X breakpoint 6 SSX1 0.621 synovial sarcoma, X breakpoint 1 SSX4 0.453 synovial sarcoma, X breakpoint 4 isoform b SSX4B 0.453 synovial sarcoma, X breakpoint 4B isoform b LOC100291196 0.211 PREDICTED: hypothetical protein XP_002348195 PRDM9 0.122 PR domain containing 9 PRDM7 0.119 PR domain containing 7 isoform 1 LOC100293029 0.052 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.052 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.052 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.052 PREDICTED: similar to zinc finger protein 30 ZNF425 0.052 zinc finger protein 425 ZNF398 0.052 zinc finger 398 isoform a ZNF777 0.046 zinc finger protein 777 ZNF688 0.046 zinc finger protein 688 isoform a ZNF75D 0.040 zinc finger protein 75 ZFP92 0.040 zinc finger protein 92 homolog ZNF786 0.040 zinc finger protein 786 ZNF862 0.037 zinc finger protein 862 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.