Name: SSX9 | Sequence: fasta or formatted (188aa) | NCBI GI: 27902281 | |
Description: synovial sarcoma, X breakpoint 9
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Referenced in: Additional Genes in Development
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.4 12 1 C cysteine 1.1 2 1 D aspartate 6.9 13 2 E glutamate 8.5 16 2 F phenylalanine 4.3 8 1 G glycine 6.9 13 1 H histidine 1.6 3 1 I isoleucine 5.3 10 2 K lysine 12.2 23 2 L leucine 4.3 8 1 M methionine 3.7 7 1 N asparagine 4.8 9 1 P proline 6.9 13 2 Q glutamine 4.8 9 1 R arginine 6.4 12 2 S serine 5.3 10 2 T threonine 4.3 8 2 V valine 2.7 5 1 W tryptophan 1.1 2 1 Y tyrosine 2.7 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 synovial sarcoma, X breakpoint 9 SSX7 0.896 synovial sarcoma, X breakpoint 7 SSX2B 0.868 PREDICTED: synovial sarcoma, X breakpoint 2B SSX2 0.868 synovial sarcoma, X breakpoint 2 isoform b SSX3 0.849 synovial sarcoma, X breakpoint 3 isoform a SSX5 0.822 synovial sarcoma, X breakpoint 5 isoform b SSX4 0.816 synovial sarcoma, X breakpoint 4 isoform a SSX4B 0.816 synovial sarcoma, X breakpoint 4B isoform a SSX5 0.767 synovial sarcoma, X breakpoint 5 isoform a SSX1 0.759 synovial sarcoma, X breakpoint 1 SSX6 0.729 synovial sarcoma, X breakpoint 6 SSX2 0.688 synovial sarcoma, X breakpoint 2 isoform a SSX3 0.671 synovial sarcoma, X breakpoint 3 isoform b SSX4 0.430 synovial sarcoma, X breakpoint 4 isoform b SSX4B 0.430 synovial sarcoma, X breakpoint 4B isoform b LOC100291196 0.189 PREDICTED: hypothetical protein XP_002348195 PRDM7 0.151 PR domain containing 7 isoform 1 PRDM9 0.148 PR domain containing 9 ZNF425 0.074 zinc finger protein 425 ZNF398 0.047 zinc finger 398 isoform a LOC100293029 0.044 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.044 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.044 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.044 PREDICTED: similar to zinc finger protein 30 ZNF75D 0.044 zinc finger protein 75 ZNF777 0.041 zinc finger protein 777 ZNF30 0.038 zinc finger protein 30 isoform b ZFP92 0.036 zinc finger protein 92 homolog ZNF786 0.036 zinc finger protein 786 ZNF789 0.036 zinc finger protein 789 isoform 1Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.