PRDM6 12547

Name: PRDM6	Sequence: fasta or formatted (595aa)		NCBI GI: 210031233
Description: PR domain containing 6		Referenced in: Kruppel-related Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 54 8 C cysteine 4.4 26 1 D aspartate 3.4 20 1 E glutamate 4.9 29 2 F phenylalanine 3.5 21 2 G glycine 7.9 47 8 H histidine 2.9 17 1 I isoleucine 3.2 19 2 K lysine 2.9 17 1 L leucine 8.4 50 2 M methionine 1.5 9 1 N asparagine 3.5 21 2 P proline 10.3 61 8 Q glutamine 6.6 39 2 R arginine 5.9 35 2 S serine 9.2 55 3 T threonine 5.0 30 2 V valine 4.0 24 2 W tryptophan 1.3 8 1 Y tyrosine 2.2 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 6 PRDM14 0.122 PR domain containing 14 PRDM12 0.102 PR domain containing 12 ZFP2 0.077 zinc finger protein 2 homolog ZNF266 0.074 zinc finger protein 266 ZNF266 0.074 zinc finger protein 266 ZNF333 0.074 zinc finger protein 333 ZNF416 0.074 zinc finger protein 416 ZNF91 0.074 zinc finger protein 91 ZNF239 0.073 zinc finger protein 239 ZNF239 0.073 zinc finger protein 239 ZNF239 0.073 zinc finger protein 239 ZNF239 0.073 zinc finger protein 239 ZNF782 0.073 zinc finger protein 782 LOC100287429 0.072 PREDICTED: hypothetical protein XP_002343926 isofor... LOC100287429 0.072 PREDICTED: hypothetical protein XP_002343925 isofor... LOC100287429 0.072 PREDICTED: hypothetical protein XP_002343927 isofor... ZNF184 0.072 zinc finger protein 184 DKFZp686E2433 0.072 hypothetical protein LOC345462 ZNF84 0.072 zinc finger protein 84 ZNF84 0.072 zinc finger protein 84 EVI1 0.071 ecotropic viral integration site 1 isoform a LOC647678 0.071 PREDICTED: similar to zinc finger protein 347 [Homo... LOC647678 0.071 PREDICTED: similar to zinc finger protein 347 [Homo... LOC100287477 0.071 PREDICTED: hypothetical protein XP_002343697 ZNF34 0.071 zinc finger protein 34 ZSCAN12 0.071 zinc finger and SCAN domain containing 12 ZNF141 0.071 zinc finger protein 141 ZNF624 0.071 zinc finger protein 624 ZSCAN22 0.071 zinc finger and SCAN domain containing 22 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.