PRDM11 27772

Name: PRDM11	Sequence: fasta or formatted (511aa)		NCBI GI: 41349466
Description: PR domain containing 11		Referenced in: Kruppel-related Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 27 2 C cysteine 2.9 15 1 D aspartate 6.1 31 2 E glutamate 9.2 47 4 F phenylalanine 3.1 16 2 G glycine 5.9 30 2 H histidine 2.0 10 1 I isoleucine 3.9 20 1 K lysine 7.2 37 4 L leucine 8.2 42 2 M methionine 2.7 14 1 N asparagine 2.3 12 2 P proline 7.0 36 2 Q glutamine 5.3 27 2 R arginine 6.5 33 2 S serine 7.8 40 2 T threonine 3.3 17 2 V valine 7.4 38 2 W tryptophan 1.4 7 1 Y tyrosine 2.3 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 11 PRDM9 0.129 PR domain containing 9 PRDM7 0.127 PR domain containing 7 isoform 1 PRDM15 0.073 PR domain containing 15 isoform 2 PRDM7 0.071 PR domain containing 7 isoform 2 PRDM4 0.064 PR domain containing 4 PRDM1 0.061 PR domain containing 1, with ZNF domain isoform 1 [... PRDM10 0.059 PR domain containing 10 isoform 2 PRDM10 0.059 PR domain containing 10 isoform 4 PRDM10 0.059 PR domain containing 10 isoform 1 PRDM10 0.059 PR domain containing 10 isoform 3 PRDM15 0.056 PR domain containing 15 isoform 1 PRDM6 0.049 PR domain containing 6 PRDM14 0.044 PR domain containing 14 PRDM1 0.040 PR domain containing 1, with ZNF domain isoform 2 [H... PRDM2 0.038 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.038 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.036 retinoblastoma protein-binding zinc finger protein ... PRDM12 0.024 PR domain containing 12 PRDM8 0.020 PR domain containing 8 PRDM8 0.020 PR domain containing 8 PRDM16 0.019 PR domain containing 16 isoform 2 PRDM16 0.019 PR domain containing 16 isoform 1 PRDM5 0.019 PR domain containing 5 EVI1 0.019 ecotropic viral integration site 1 isoform a LOC100290519 0.018 PREDICTED: hypothetical protein XP_002346939 PRDM13 0.018 PR domain containing 13 ZNF408 0.012 zinc finger protein 408 RORB 0.011 RAR-related orphan receptor B ZBTB7C 0.008 zinc finger and BTB domain containing 7C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.