PRDM7 4405

Name: PRDM7	Sequence: fasta or formatted (492aa)		NCBI GI: 148271100
Description: PR domain containing 7 isoform 1		Referenced in: Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [171aa] PR domain containing 7 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 33 2 C cysteine 1.8 9 1 D aspartate 4.7 23 3 E glutamate 8.1 40 2 F phenylalanine 2.8 14 2 G glycine 7.3 36 1 H histidine 2.4 12 1 I isoleucine 4.3 21 1 K lysine 5.9 29 2 L leucine 5.7 28 2 M methionine 3.0 15 1 N asparagine 5.1 25 2 P proline 6.1 30 2 Q glutamine 5.3 26 2 R arginine 7.3 36 2 S serine 9.6 47 2 T threonine 3.9 19 1 V valine 4.3 21 1 W tryptophan 2.6 13 1 Y tyrosine 3.0 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 7 isoform 1 PRDM9 0.704 PR domain containing 9 PRDM7 0.219 PR domain containing 7 isoform 2 PRDM11 0.130 PR domain containing 11 PRDM4 0.064 PR domain containing 4 PRDM14 0.062 PR domain containing 14 SSX1 0.062 synovial sarcoma, X breakpoint 1 PRDM2 0.061 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.061 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.061 retinoblastoma protein-binding zinc finger protein ... SSX4 0.059 synovial sarcoma, X breakpoint 4 isoform a PRDM6 0.059 PR domain containing 6 SSX4B 0.059 synovial sarcoma, X breakpoint 4B isoform a PRDM12 0.058 PR domain containing 12 SSX2B 0.057 PREDICTED: synovial sarcoma, X breakpoint 2B SSX2 0.057 synovial sarcoma, X breakpoint 2 isoform b SSX7 0.057 synovial sarcoma, X breakpoint 7 SSX9 0.055 synovial sarcoma, X breakpoint 9 SSX3 0.050 synovial sarcoma, X breakpoint 3 isoform a PRDM1 0.050 PR domain containing 1, with ZNF domain isoform 1 [... SSX6 0.050 synovial sarcoma, X breakpoint 6 PRDM15 0.049 PR domain containing 15 isoform 2 SSX2 0.046 synovial sarcoma, X breakpoint 2 isoform a PRDM10 0.044 PR domain containing 10 isoform 2 PRDM10 0.044 PR domain containing 10 isoform 4 PRDM10 0.044 PR domain containing 10 isoform 1 PRDM10 0.044 PR domain containing 10 isoform 3 SSX5 0.044 synovial sarcoma, X breakpoint 5 isoform b SSX5 0.044 synovial sarcoma, X breakpoint 5 isoform a SSX3 0.039 synovial sarcoma, X breakpoint 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.