SSX7 24444

Name: SSX7	Sequence: fasta or formatted (188aa)		NCBI GI: 27659732
Description: synovial sarcoma, X breakpoint 7		Referenced in: Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 11 1 C cysteine 1.1 2 1 D aspartate 6.9 13 2 E glutamate 8.5 16 2 F phenylalanine 4.3 8 1 G glycine 6.9 13 1 H histidine 2.1 4 1 I isoleucine 4.8 9 1 K lysine 12.2 23 2 L leucine 4.3 8 1 M methionine 3.7 7 1 N asparagine 4.8 9 1 P proline 7.4 14 2 Q glutamine 4.8 9 1 R arginine 6.4 12 2 S serine 5.9 11 1 T threonine 4.3 8 1 V valine 2.1 4 1 W tryptophan 1.1 2 1 Y tyrosine 2.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synovial sarcoma, X breakpoint 7 SSX9 0.889 synovial sarcoma, X breakpoint 9 SSX2B 0.834 PREDICTED: synovial sarcoma, X breakpoint 2B SSX2 0.834 synovial sarcoma, X breakpoint 2 isoform b SSX3 0.829 synovial sarcoma, X breakpoint 3 isoform a SSX5 0.818 synovial sarcoma, X breakpoint 5 isoform b SSX4 0.796 synovial sarcoma, X breakpoint 4 isoform a SSX4B 0.796 synovial sarcoma, X breakpoint 4B isoform a SSX5 0.764 synovial sarcoma, X breakpoint 5 isoform a SSX6 0.761 synovial sarcoma, X breakpoint 6 SSX1 0.753 synovial sarcoma, X breakpoint 1 SSX2 0.658 synovial sarcoma, X breakpoint 2 isoform a SSX3 0.649 synovial sarcoma, X breakpoint 3 isoform b SSX4 0.410 synovial sarcoma, X breakpoint 4 isoform b SSX4B 0.410 synovial sarcoma, X breakpoint 4B isoform b LOC100291196 0.204 PREDICTED: hypothetical protein XP_002348195 PRDM9 0.160 PR domain containing 9 PRDM7 0.155 PR domain containing 7 isoform 1 ZNF425 0.062 zinc finger protein 425 LOC100293029 0.052 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.052 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.052 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.052 PREDICTED: similar to zinc finger protein 30 ZNF777 0.041 zinc finger protein 777 ZNF398 0.041 zinc finger 398 isoform a ZNF75D 0.038 zinc finger protein 75 ZNF30 0.035 zinc finger protein 30 isoform b ZFP92 0.033 zinc finger protein 92 homolog ZNF786 0.033 zinc finger protein 786 POGK 0.027 pogo transposable element with KRAB domain Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.