PRDM9 4334

Name: PRDM9	Sequence: fasta or formatted (894aa)		NCBI GI: 147905620
Description: PR domain containing 9		Referenced in: Kruppel-related Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.2 29 2 C cysteine 4.5 40 2 D aspartate 3.2 29 3 E glutamate 8.6 77 3 F phenylalanine 3.1 28 2 G glycine 8.6 77 1 H histidine 4.8 43 1 I isoleucine 2.5 22 1 K lysine 7.0 63 2 L leucine 6.4 57 2 M methionine 1.3 12 1 N asparagine 3.0 27 2 P proline 5.3 47 2 Q glutamine 5.4 48 2 R arginine 10.1 90 2 S serine 7.6 68 2 T threonine 5.4 48 1 V valine 4.6 41 1 W tryptophan 1.8 16 1 Y tyrosine 3.6 32 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 9 PRDM7 0.372 PR domain containing 7 isoform 1 ZNF133 0.309 zinc finger protein 133 ZNF133 0.309 zinc finger protein 133 HKR1 0.308 GLI-Kruppel family member HKR1 ZNF343 0.304 zinc finger protein 343 ZNF169 0.275 zinc finger protein 169 ZNF432 0.275 zinc finger protein 432 ZNF337 0.273 zinc finger protein 337 ZNF615 0.269 zinc finger protein 615 LOC100287429 0.264 PREDICTED: hypothetical protein XP_002343926 isofor... LOC100287429 0.264 PREDICTED: hypothetical protein XP_002343925 isofor... LOC100287429 0.264 PREDICTED: hypothetical protein XP_002343927 isofor... ZNF84 0.264 zinc finger protein 84 ZNF84 0.264 zinc finger protein 84 ZNF585B 0.254 zinc finger protein 585B ZNF585A 0.253 zinc finger protein 585A ZNF585A 0.253 zinc finger protein 585A ZNF229 0.253 zinc finger protein 229 ZNF420 0.251 zinc finger protein 420 ZSCAN2 0.250 zinc finger protein 29 isoform 1 ZNF568 0.250 zinc finger protein 568 ZNF605 0.250 zinc finger protein 605 ZNF268 0.250 zinc finger protein 268 ZNF569 0.249 zinc finger protein 569 ZNF567 0.249 zinc finger protein 567 ZNF41 0.248 zinc finger protein 41 ZNF41 0.248 zinc finger protein 41 ZFP112 0.248 zinc finger protein 228 isoform 1 ZFP112 0.248 zinc finger protein 228 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.