SSX2 24804

Name: SSX2	Sequence: fasta or formatted (188aa)		NCBI GI: 28559006
Description: synovial sarcoma, X breakpoint 2 isoform b		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [223aa] synovial sarcoma, X breakpoint 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 12 1 C cysteine 1.1 2 1 D aspartate 6.9 13 2 E glutamate 12.2 23 2 F phenylalanine 4.3 8 1 G glycine 6.9 13 1 H histidine 1.6 3 1 I isoleucine 4.8 9 1 K lysine 10.6 20 2 L leucine 3.7 7 1 M methionine 3.7 7 1 N asparagine 4.3 8 1 P proline 8.5 16 2 Q glutamine 4.3 8 1 R arginine 6.4 12 2 S serine 4.3 8 1 T threonine 3.7 7 2 V valine 2.7 5 1 W tryptophan 1.1 2 1 Y tyrosine 2.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synovial sarcoma, X breakpoint 2 isoform b SSX2B 1.000 PREDICTED: synovial sarcoma, X breakpoint 2B SSX3 0.894 synovial sarcoma, X breakpoint 3 isoform a SSX9 0.859 synovial sarcoma, X breakpoint 9 SSX5 0.835 synovial sarcoma, X breakpoint 5 isoform b SSX7 0.832 synovial sarcoma, X breakpoint 7 SSX2 0.818 synovial sarcoma, X breakpoint 2 isoform a SSX5 0.780 synovial sarcoma, X breakpoint 5 isoform a SSX4 0.775 synovial sarcoma, X breakpoint 4 isoform a SSX4B 0.775 synovial sarcoma, X breakpoint 4B isoform a SSX6 0.770 synovial sarcoma, X breakpoint 6 SSX1 0.748 synovial sarcoma, X breakpoint 1 SSX3 0.710 synovial sarcoma, X breakpoint 3 isoform b SSX4 0.401 synovial sarcoma, X breakpoint 4 isoform b SSX4B 0.401 synovial sarcoma, X breakpoint 4B isoform b LOC100291196 0.198 PREDICTED: hypothetical protein XP_002348195 PRDM9 0.154 PR domain containing 9 PRDM7 0.154 PR domain containing 7 isoform 1 ZNF425 0.065 zinc finger protein 425 LOC100293029 0.057 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.057 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.057 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.057 PREDICTED: similar to zinc finger protein 30 ZNF688 0.057 zinc finger protein 688 isoform a ZNF777 0.049 zinc finger protein 777 ZNF398 0.049 zinc finger 398 isoform a ZNF789 0.038 zinc finger protein 789 isoform 1 ZNF132 0.038 zinc finger protein 132 POGK 0.038 pogo transposable element with KRAB domain ZNF786 0.038 zinc finger protein 786 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.