SSX6 24443

Name: SSX6	Sequence: fasta or formatted (188aa)		NCBI GI: 27659730
Description: synovial sarcoma, X breakpoint 6		Referenced in: Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 12 1 C cysteine 1.1 2 1 D aspartate 8.0 15 2 E glutamate 10.1 19 2 F phenylalanine 3.7 7 1 G glycine 5.9 11 1 H histidine 2.1 4 1 I isoleucine 4.3 8 2 K lysine 12.8 24 2 L leucine 3.7 7 1 M methionine 3.7 7 1 N asparagine 4.3 8 1 P proline 5.9 11 2 Q glutamine 2.7 5 1 R arginine 9.0 17 1 S serine 8.5 16 3 T threonine 2.7 5 1 V valine 2.7 5 1 W tryptophan 1.1 2 1 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synovial sarcoma, X breakpoint 6 SSX1 0.790 synovial sarcoma, X breakpoint 1 SSX2B 0.785 PREDICTED: synovial sarcoma, X breakpoint 2B SSX2 0.785 synovial sarcoma, X breakpoint 2 isoform b SSX7 0.773 synovial sarcoma, X breakpoint 7 SSX3 0.757 synovial sarcoma, X breakpoint 3 isoform a SSX4 0.743 synovial sarcoma, X breakpoint 4 isoform a SSX4B 0.743 synovial sarcoma, X breakpoint 4B isoform a SSX5 0.740 synovial sarcoma, X breakpoint 5 isoform b SSX9 0.735 synovial sarcoma, X breakpoint 9 SSX5 0.685 synovial sarcoma, X breakpoint 5 isoform a SSX2 0.608 synovial sarcoma, X breakpoint 2 isoform a SSX3 0.577 synovial sarcoma, X breakpoint 3 isoform b SSX4 0.384 synovial sarcoma, X breakpoint 4 isoform b SSX4B 0.384 synovial sarcoma, X breakpoint 4B isoform b LOC100291196 0.221 PREDICTED: hypothetical protein XP_002348195 PRDM9 0.149 PR domain containing 9 PRDM7 0.138 PR domain containing 7 isoform 1 ZNF425 0.039 zinc finger protein 425 LOC100293029 0.036 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.036 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.036 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.036 PREDICTED: similar to zinc finger protein 30 ZNF777 0.036 zinc finger protein 777 CDC2L2 0.030 cell division cycle 2-like 2 isoform 4 ZNF551 0.028 zinc finger protein 551 NAP1L3 0.028 nucleosome assembly protein 1-like 3 LOC100294398 0.028 PREDICTED: similar to PITSLRE protein kinase beta S... PPIG 0.025 peptidylprolyl isomerase G ZNF398 0.025 zinc finger 398 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.