PRDM7 27777

Name: PRDM7	Sequence: fasta or formatted (171aa)		NCBI GI: 41349478
Description: PR domain containing 7 isoform 2		Referenced in: Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [492aa] PR domain containing 7 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 12 2 C cysteine 2.9 5 1 D aspartate 4.7 8 1 E glutamate 5.3 9 2 F phenylalanine 3.5 6 2 G glycine 9.9 17 1 H histidine 1.8 3 1 I isoleucine 4.7 8 1 K lysine 5.8 10 2 L leucine 8.8 15 2 M methionine 2.3 4 1 N asparagine 3.5 6 1 P proline 7.6 13 2 Q glutamine 2.3 4 1 R arginine 5.3 9 1 S serine 12.9 22 2 T threonine 5.3 9 1 V valine 2.3 4 1 W tryptophan 1.8 3 1 Y tyrosine 2.3 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 7 isoform 2 PRDM7 0.664 PR domain containing 7 isoform 1 PRDM9 0.652 PR domain containing 9 PRDM11 0.221 PR domain containing 11 PRDM4 0.064 PR domain containing 4 PRDM1 0.058 PR domain containing 1, with ZNF domain isoform 1 [... PRDM2 0.055 retinoblastoma protein-binding zinc finger protein ... PRDM2 0.055 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.055 retinoblastoma protein-binding zinc finger protein i... PRDM12 0.036 PR domain containing 12 ZNF408 0.030 zinc finger protein 408 PRDM14 0.027 PR domain containing 14 MDS1 0.024 myelodysplasia syndrome protein 1 PRDM15 0.021 PR domain containing 15 isoform 2 PRDM6 0.015 PR domain containing 6 SF3B4 0.015 splicing factor 3b, subunit 4 NDN 0.012 necdin TRIM71 0.012 tripartite motif-containing 71 FGFRL1 0.009 fibroblast growth factor receptor-like 1 precursor [... FGFRL1 0.009 fibroblast growth factor receptor-like 1 precursor [... FGFRL1 0.009 fibroblast growth factor receptor-like 1 precursor [... ARID3C 0.009 AT rich interactive domain 3C (BRIGHT- like) KIAA0922 0.009 hypothetical protein LOC23240 isoform 2 KIAA0922 0.009 hypothetical protein LOC23240 isoform 1 MPZL1 0.006 myelin protein zero-like 1 isoform a MED26 0.006 mediator complex subunit 26 PRDM16 0.006 PR domain containing 16 isoform 2 PRDM16 0.006 PR domain containing 16 isoform 1 C16orf59 0.006 hypothetical protein LOC80178 EHD2 0.006 EH-domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.