TMEM80 480

Name: TMEM80	Sequence: fasta or formatted (168aa)		NCBI GI: 109689699
Description: transmembrane protein 80 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {160aa} transmembrane protein 80 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.1 27 2 C cysteine 0.6 1 1 D aspartate 2.4 4 1 E glutamate 3.0 5 1 F phenylalanine 3.6 6 1 G glycine 8.9 15 2 H histidine 1.8 3 1 I isoleucine 1.8 3 1 K lysine 1.2 2 1 L leucine 19.6 33 2 M methionine 3.0 5 1 N asparagine 0.6 1 1 P proline 3.6 6 1 Q glutamine 2.4 4 1 R arginine 7.7 13 2 S serine 6.0 10 2 T threonine 6.0 10 1 V valine 5.4 9 2 W tryptophan 1.8 3 1 Y tyrosine 4.8 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 80 isoform 2 TMEM80 0.924 transmembrane protein 80 isoform 1 TMEM216 0.125 transmembrane protein 216 TMEM17 0.089 transmembrane protein 17 OTOP1 0.026 otopetrin 1 SYNCRIP 0.016 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.016 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.016 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.016 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.016 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.016 synaptotagmin binding, cytoplasmic RNA interacting ... ANKRD43 0.016 ankyrin repeat domain 43 LOC100292062 0.013 PREDICTED: hypothetical protein XP_002346314 LOC100290552 0.013 PREDICTED: hypothetical protein XP_002347697 BRD1 0.013 bromodomain containing protein 1 C6orf153 0.013 hypothetical protein LOC88745 COL5A1 0.010 alpha 1 type V collagen preproprotein COL27A1 0.010 collagen, type XXVII, alpha 1 COL5A3 0.010 collagen, type V, alpha 3 preproprotein KCNK16 0.010 potassium channel, subfamily K, member 16 isoform 3... KCNK16 0.010 potassium channel, subfamily K, member 16 isoform 4... KCNK16 0.010 potassium channel, subfamily K, member 16 isoform 1... KCNK16 0.010 potassium channel, subfamily K, member 16 isoform 2 ... PIGO 0.010 phosphatidylinositol glycan anchor biosynthesis, cla... COLQ 0.010 acetylcholinesterase collagen-like tail subunit iso... GPR137C 0.010 G protein-coupled receptor 137C IQSEC2 0.010 IQ motif and Sec7 domain 2 isoform1 NPFFR1 0.010 neuropeptide FF receptor 1 ANO8 0.007 anoctamin 8 ANKRD60 0.007 PREDICTED: ankyrin repeat domain 60 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.