BRD1 1067

Name: BRD1	Sequence: fasta or formatted (1058aa)		NCBI GI: 11321642
Description: bromodomain containing protein 1		Referenced in: PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 82 3 C cysteine 3.5 37 2 D aspartate 5.2 55 3 E glutamate 8.2 87 3 F phenylalanine 2.4 25 2 G glycine 5.5 58 3 H histidine 2.6 27 2 I isoleucine 4.1 43 2 K lysine 7.3 77 3 L leucine 9.3 98 2 M methionine 2.5 26 2 N asparagine 3.4 36 2 P proline 6.4 68 2 Q glutamine 4.0 42 2 R arginine 8.5 90 3 S serine 7.0 74 3 T threonine 3.4 36 2 V valine 5.9 62 2 W tryptophan 1.1 12 1 Y tyrosine 2.2 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 bromodomain containing protein 1 BRPF1 0.508 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.505 bromodomain and PHD finger-containing protein 1 isof... BRPF3 0.433 bromodomain and PHD finger containing, 3 PHF17 0.093 PHD finger protein 17 long isoform PHF16 0.091 PHD finger protein 16 PHF16 0.091 PHD finger protein 16 PHF15 0.088 PHD finger protein 15 PHF17 0.085 PHD finger protein 17 short isoform MLLT10 0.064 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.064 myeloid/lymphoid or mixed-lineage leukemia translocat... MLLT6 0.063 myeloid/lymphoid or mixed-lineage leukemia (trithora... KDM4B 0.045 jumonji domain containing 2B KDM4A 0.045 jumonji domain containing 2A KDM4C 0.042 jumonji domain containing 2C isoform 2 KDM4C 0.042 jumonji domain containing 2C isoform 1 PHF14 0.039 PHD finger protein 14 isoform 2 PHF14 0.039 PHD finger protein 14 isoform 1 BRD9 0.034 bromodomain containing 9 isoform 1 BRD7 0.031 bromodomain containing 7 KDM4C 0.025 jumonji domain containing 2C isoform 3 KDM4C 0.025 jumonji domain containing 2C isoform 4 BRD9 0.023 bromodomain containing 9 isoform 2 BPTF 0.022 bromodomain PHD finger transcription factor isoform ... BPTF 0.022 bromodomain PHD finger transcription factor isoform ... SMARCA4 0.019 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.019 SWI/SNF-related matrix-associated actin-dependent r... ATAD2 0.019 ATPase family, AAA domain containing 2 BAZ2B 0.018 bromodomain adjacent to zinc finger domain, 2B [Homo... ATAD2B 0.018 ATPase family, AAA domain containing 2B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.