Guide to the Human Genome
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Name: NPFFR1 Sequence: fasta or formatted (430aa) NCBI GI: 11545887
Description:

neuropeptide FF receptor 1

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         42           2
 C cysteine            2.3         10           1
 D aspartate           1.9          8           1
 E glutamate           3.7         16           2
 F phenylalanine       5.3         23           2
 G glycine             5.8         25           2
 H histidine           3.5         15           2
 I isoleucine          4.4         19           2
 K lysine              1.6          7           1
 L leucine            11.6         50           4
 M methionine          3.3         14           1
 N asparagine          3.7         16           1
 P proline             7.9         34           2
 Q glutamine           1.9          8           1
 R arginine            7.2         31           3
 S serine              7.2         31           2
 T threonine           5.6         24           2
 V valine              8.1         35           3
 W tryptophan          2.1          9           1
 Y tyrosine            3.0         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuropeptide FF receptor 1 
NPFFR2                0.449   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.449   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.449   neuropeptide FF receptor 2 isoform 3 
HCRTR1                0.196   orexin receptor 1 
HCRTR2                0.195   orexin receptor 2 
NPY2R                 0.174   neuropeptide Y receptor Y2 
GPR83                 0.166   G protein-coupled receptor 83 
QRFPR                 0.162   G protein-coupled receptor 103 
CCKAR                 0.160   cholecystokinin A receptor 
PRLHR                 0.159   G protein-coupled receptor 10 
NPY1R                 0.158   neuropeptide Y receptor Y1 
PPYR1                 0.158   pancreatic polypeptide receptor 1 
GALR2                 0.152   galanin receptor 2 
TACR2                 0.148   tachykinin receptor 2 
GALR1                 0.139   galanin receptor 1 
GALR3                 0.135   galanin receptor 3 
KISS1R                0.132   G protein-coupled receptor 54 
SSTR4                 0.130   somatostatin receptor 4 
TACR3                 0.125   tachykinin receptor 3 
TACR1                 0.124   tachykinin receptor 1 isoform long 
BRS3                  0.123   bombesin-like receptor 3 
SSTR2                 0.119   somatostatin receptor 2 
DRD1                  0.118   dopamine receptor D1 
SSTR5                 0.117   somatostatin receptor 5 
SSTR1                 0.117   somatostatin receptor 1 
GPR50                 0.116   G protein-coupled receptor 50 
OPRK1                 0.114   opioid receptor, kappa 1 
SSTR3                 0.113   somatostatin receptor 3 
PROKR2                0.111   prokineticin receptor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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