Guide to the Human Genome
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Name: KCNK16 Sequence: fasta or formatted (262aa) NCBI GI: 205360973
Description:

potassium channel, subfamily K, member 16 isoform 4

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [309aa] potassium channel, subfamily K, member 16 isoform 2
alt prot [322aa] potassium channel, subfamily K, member 16 isoform 1
alt prot [294aa] potassium channel, subfamily K, member 16 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         21           2
 C cysteine            2.3          6           1
 D aspartate           2.3          6           1
 E glutamate           4.2         11           1
 F phenylalanine       7.6         20           3
 G glycine            10.7         28           2
 H histidine           1.1          3           1
 I isoleucine          4.2         11           1
 K lysine              2.3          6           2
 L leucine            12.6         33           3
 M methionine          1.5          4           1
 N asparagine          3.1          8           1
 P proline             5.0         13           2
 Q glutamine           5.3         14           1
 R arginine            5.7         15           2
 S serine              6.1         16           2
 T threonine           5.3         14           2
 V valine              7.6         20           2
 W tryptophan          2.3          6           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 16 isoform 4... 
KCNK16                0.955   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK16                0.840   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.840   potassium channel, subfamily K, member 16 isoform 1...
KCNK17                0.331   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK17                0.325   potassium channel, subfamily K, member 17 isoform 2...
KCNK10                0.301   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.301   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.301   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK2                 0.297   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.297   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.297   potassium channel, subfamily K, member 2 isoform a [...
KCNK4                 0.272   TRAAK 
KCNK5                 0.270   potassium channel, subfamily K, member 5 
KCNK1                 0.237   potassium channel, subfamily K, member 1 
KCNK6                 0.215   potassium channel, subfamily K, member 6 
KCNK3                 0.207   potassium channel, subfamily K, member 3 
KCNK9                 0.198   potassium channel, subfamily K, member 9 
KCNK15                0.196   potassium family, subfamily K, member 15 
KCNK7                 0.157   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.157   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.157   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.157   potassium channel, subfamily K, member 7 isoform B [...
KCNK13                0.147   potassium channel, subfamily K, member 13 
KCNK12                0.145   potassium channel, subfamily K, member 12 
KCNK18                0.074   potassium channel, subfamily K, member 18 
KCNH1                 0.033   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.033   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.029   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.029   potassium voltage-gated channel, subfamily H, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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