Guide to the Human Genome
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Name: KCNK16 Sequence: fasta or formatted (322aa) NCBI GI: 205360971
Description:

potassium channel, subfamily K, member 16 isoform 1

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [309aa] potassium channel, subfamily K, member 16 isoform 2
alt prot [262aa] potassium channel, subfamily K, member 16 isoform 4
alt prot [294aa] potassium channel, subfamily K, member 16 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           2
 C cysteine            1.9          6           1
 D aspartate           2.2          7           1
 E glutamate           4.3         14           1
 F phenylalanine       7.8         25           3
 G glycine             8.7         28           2
 H histidine           2.2          7           1
 I isoleucine          4.0         13           1
 K lysine              2.2          7           1
 L leucine            12.7         41           3
 M methionine          2.2          7           1
 N asparagine          3.7         12           1
 P proline             8.4         27           2
 Q glutamine           5.6         18           2
 R arginine            3.4         11           2
 S serine              8.1         26           2
 T threonine           4.3         14           2
 V valine              6.5         21           2
 W tryptophan          3.4         11           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 16 isoform 1... 
KCNK16                0.661   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.661   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.661   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK17                0.260   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK17                0.256   potassium channel, subfamily K, member 17 isoform 2...
KCNK10                0.237   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.237   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.237   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK2                 0.234   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.234   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.234   potassium channel, subfamily K, member 2 isoform a [...
KCNK4                 0.214   TRAAK 
KCNK5                 0.211   potassium channel, subfamily K, member 5 
KCNK1                 0.188   potassium channel, subfamily K, member 1 
KCNK6                 0.168   potassium channel, subfamily K, member 6 
KCNK3                 0.163   potassium channel, subfamily K, member 3 
KCNK9                 0.156   potassium channel, subfamily K, member 9 
KCNK15                0.154   potassium family, subfamily K, member 15 
KCNK7                 0.123   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.123   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.123   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.123   potassium channel, subfamily K, member 7 isoform B [...
KCNK13                0.116   potassium channel, subfamily K, member 13 
KCNK12                0.114   potassium channel, subfamily K, member 12 
KCNK18                0.059   potassium channel, subfamily K, member 18 
KCNH1                 0.026   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.026   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.023   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.023   potassium voltage-gated channel, subfamily H, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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