MADCAM1 442

Name: MADCAM1	Sequence: fasta or formatted (382aa)		NCBI GI: 109633022
Description: mucosal vascular addressin cell adhesion molecule 1 isoform a precursor		Referenced in: Cardiovascular System
Other entries for this name: alt prot [295aa] mucosal vascular addressin cell adhesion molecule 1 isoform b pre...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 34 2 C cysteine 1.8 7 1 D aspartate 4.5 17 2 E glutamate 6.0 23 5 F phenylalanine 1.3 5 1 G glycine 8.4 32 2 H histidine 2.1 8 1 I isoleucine 1.0 4 1 K lysine 1.3 5 1 L leucine 12.8 49 4 M methionine 0.5 2 1 N asparagine 0.5 2 1 P proline 12.3 47 2 Q glutamine 6.0 23 2 R arginine 5.5 21 2 S serine 8.9 34 2 T threonine 8.6 33 2 V valine 7.3 28 2 W tryptophan 1.3 5 1 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucosal vascular addressin cell adhesion molecule 1... MADCAM1 0.558 mucosal vascular addressin cell adhesion molecule 1 ... MUC2 0.053 mucin 2 precursor VCAM1 0.051 vascular cell adhesion molecule 1 isoform a precursor... PRG4 0.051 proteoglycan 4 isoform D PRG4 0.051 proteoglycan 4 isoform C PRG4 0.051 proteoglycan 4 isoform B PRG4 0.051 proteoglycan 4 isoform A COL27A1 0.039 collagen, type XXVII, alpha 1 FLJ22184 0.036 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.036 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.036 PREDICTED: hypothetical protein LOC80164 MUC7 0.035 mucin 7, secreted precursor MUC7 0.035 mucin 7, secreted precursor MUC7 0.035 mucin 7, secreted precursor NACA 0.035 nascent polypeptide-associated complex alpha subuni... C14orf174 0.032 hypothetical protein LOC161394 KIAA0754 0.029 hypothetical protein LOC643314 PCLO 0.029 piccolo isoform 2 PCLO 0.029 piccolo isoform 1 SYN1 0.029 synapsin I isoform Ia SYN1 0.029 synapsin I isoform Ib TROAP 0.029 tastin isoform 1 SMTN 0.029 smoothelin isoform b SMTN 0.029 smoothelin isoform c SMTN 0.029 smoothelin isoform a PRR12 0.028 proline rich 12 FMN1 0.028 formin 1 KIAA1543 0.028 NEZHA isoform 2 KIAA1543 0.028 NEZHA isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.