SMTN 11587

Name: SMTN	Sequence: fasta or formatted (915aa)		NCBI GI: 19913396
Description: smoothelin isoform b		Referenced in: Muscle
Other entries for this name: alt prot [917aa] smoothelin isoform c alt prot [940aa] smoothelin isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 98 3 C cysteine 1.1 10 1 D aspartate 3.5 32 1 E glutamate 9.3 85 3 F phenylalanine 2.1 19 2 G glycine 7.0 64 2 H histidine 1.1 10 1 I isoleucine 1.7 16 1 K lysine 4.5 41 3 L leucine 8.3 76 3 M methionine 1.6 15 2 N asparagine 2.2 20 1 P proline 7.9 72 3 Q glutamine 5.4 49 2 R arginine 9.6 88 3 S serine 11.3 103 6 T threonine 7.3 67 3 V valine 4.3 39 2 W tryptophan 0.4 4 1 Y tyrosine 0.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 smoothelin isoform b SMTN 0.972 smoothelin isoform a SMTN 0.960 smoothelin isoform c SMTNL2 0.106 smoothelin-like 2 isoform 2 SMTNL2 0.106 smoothelin-like 2 isoform 1 SMTNL1 0.102 smoothelin-like 1 CYTSA 0.048 cytospin A CYTSA 0.048 cytospin A ACTN1 0.045 actinin, alpha 1 isoform c ACTN1 0.045 actinin, alpha 1 isoform a ACTN1 0.045 actinin, alpha 1 isoform b ACTN3 0.043 actinin, alpha 3 ACTN2 0.042 actinin, alpha 2 CYTSB 0.042 spectrin domain with coiled-coils 1 NSP5a3b CYTSB 0.042 spectrin domain with coiled-coils 1 NSP5b3b EHBP1L1 0.041 tangerin SPTBN4 0.041 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... ACTN4 0.041 actinin, alpha 4 SPTB 0.040 spectrin beta isoform a SPTB 0.040 spectrin beta isoform b SPTBN1 0.039 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.039 spectrin, beta, non-erythrocytic 1 isoform 1 MICALL2 0.037 MICAL-like 2 isoform 1 MICALL1 0.037 molecule interacting with Rab13 SPTBN5 0.036 spectrin, beta, non-erythrocytic 5 SPTBN2 0.036 spectrin, beta, non-erythrocytic 2 MICAL2 0.033 microtubule associated monoxygenase, calponin and LIM... EHBP1 0.032 EH domain binding protein 1 isoform 3 EHBP1 0.032 EH domain binding protein 1 isoform 3 EHBP1 0.032 EH domain binding protein 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.