SMTN 11588

Name: SMTN	Sequence: fasta or formatted (940aa)		NCBI GI: 19913398
Description: smoothelin isoform a		Referenced in: Muscle
Other entries for this name: alt prot [917aa] smoothelin isoform c alt prot [915aa] smoothelin isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 98 3 C cysteine 1.1 10 1 D aspartate 3.8 36 2 E glutamate 9.1 86 3 F phenylalanine 2.0 19 2 G glycine 6.9 65 2 H histidine 1.4 13 1 I isoleucine 1.7 16 1 K lysine 4.4 41 3 L leucine 8.5 80 3 M methionine 2.0 19 2 N asparagine 2.3 22 1 P proline 8.0 75 3 Q glutamine 5.1 48 2 R arginine 9.7 91 3 S serine 11.0 103 6 T threonine 6.9 65 3 V valine 4.6 43 2 W tryptophan 0.4 4 1 Y tyrosine 0.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 smoothelin isoform a SMTN 0.959 smoothelin isoform c SMTN 0.944 smoothelin isoform b SMTNL2 0.115 smoothelin-like 2 isoform 2 SMTNL2 0.115 smoothelin-like 2 isoform 1 SMTNL1 0.079 smoothelin-like 1 CYTSA 0.044 cytospin A CYTSA 0.044 cytospin A ACTN1 0.039 actinin, alpha 1 isoform c ACTN1 0.039 actinin, alpha 1 isoform a ACTN1 0.039 actinin, alpha 1 isoform b EHBP1L1 0.038 tangerin CYTSB 0.037 spectrin domain with coiled-coils 1 NSP5a3b CYTSB 0.037 spectrin domain with coiled-coils 1 NSP5b3b ACTN3 0.037 actinin, alpha 3 SPTB 0.036 spectrin beta isoform a SPTB 0.036 spectrin beta isoform b ACTN2 0.036 actinin, alpha 2 SPTBN4 0.036 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN1 0.035 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.035 spectrin, beta, non-erythrocytic 1 isoform 1 ACTN4 0.034 actinin, alpha 4 SPTBN2 0.032 spectrin, beta, non-erythrocytic 2 SPTBN5 0.031 spectrin, beta, non-erythrocytic 5 MICALL2 0.031 MICAL-like 2 isoform 1 MICALL1 0.031 molecule interacting with Rab13 MICAL2 0.029 microtubule associated monoxygenase, calponin and LIM... EHBP1 0.029 EH domain binding protein 1 isoform 3 EHBP1 0.029 EH domain binding protein 1 isoform 3 EHBP1 0.029 EH domain binding protein 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.