MADCAM1 10097

Name: MADCAM1	Sequence: fasta or formatted (295aa)		NCBI GI: 18780285
Description: mucosal vascular addressin cell adhesion molecule 1 isoform b precursor		Referenced in: Cardiovascular System
Other entries for this name: alt prot [382aa] mucosal vascular addressin cell adhesion molecule 1 isoform a pre...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 33 2 C cysteine 2.4 7 1 D aspartate 4.1 12 2 E glutamate 5.1 15 5 F phenylalanine 1.7 5 1 G glycine 9.2 27 2 H histidine 2.0 6 1 I isoleucine 0.7 2 1 K lysine 1.4 4 1 L leucine 16.3 48 4 M methionine 0.7 2 1 N asparagine 0.7 2 1 P proline 8.8 26 2 Q glutamine 6.1 18 1 R arginine 5.8 17 1 S serine 6.8 20 2 T threonine 5.8 17 1 V valine 8.8 26 2 W tryptophan 1.7 5 1 Y tyrosine 1.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mucosal vascular addressin cell adhesion molecule 1 ... MADCAM1 0.737 mucosal vascular addressin cell adhesion molecule 1... VCAM1 0.060 vascular cell adhesion molecule 1 isoform a precursor... VCAM1 0.030 vascular cell adhesion molecule 1 isoform b precurso... HSPG2 0.026 heparan sulfate proteoglycan 2 NCAM2 0.026 neural cell adhesion molecule 2 precursor ICAM5 0.021 intercellular adhesion molecule 5 precursor CSF1R 0.021 colony stimulating factor 1 receptor precursor [Homo... LAG3 0.021 lymphocyte-activation protein 3 precursor SMARCA2 0.018 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.018 SWI/SNF-related matrix-associated actin-dependent re... OBSCN 0.016 obscurin, cytoskeletal calmodulin and titin-interact... OBSCN 0.016 obscurin, cytoskeletal calmodulin and titin-interac... TAOK2 0.014 TAO kinase 2 isoform 2 SP4 0.012 Sp4 transcription factor ICAM3 0.012 intercellular adhesion molecule 3 precursor ICAM4 0.012 intercellular adhesion molecule 4 isoform 1 precursor... SELV 0.012 selenoprotein V SIRPB1 0.009 signal-regulatory protein beta 1 isoform 1 precurso... HMCN2 0.009 PREDICTED: hemicentin 2 HMCN2 0.009 PREDICTED: hemicentin 2 HMCN2 0.009 PREDICTED: hemicentin 2 XIRP1 0.009 xin actin-binding repeat containing 1 TFDP3 0.009 transcription factor Dp family, member 3 CIAPIN1 0.009 cytokine induced apoptosis inhibitor 1 TAS2R9 0.009 taste receptor, type 2, member 9 MXRA5 0.009 adlican SLC28A1 0.009 solute carrier family 28, member 1 isoform 1 ANKRD33B 0.009 PREDICTED: ankyrin repeat domain 33B ANKRD33B 0.009 PREDICTED: ankyrin repeat domain 33B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.