Guide to the Human Genome
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Name: KIAA1543 Sequence: fasta or formatted (1249aa) NCBI GI: 130502140
Description:

NEZHA isoform 2

Referenced in:

Additional Structural Proteins

Other entries for this name:
alt prot [1276aa] NEZHA isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6        145           3
 C cysteine            1.1         14           2
 D aspartate           3.8         48           2
 E glutamate           7.9         99           3
 F phenylalanine       2.5         31           2
 G glycine             6.5         81           3
 H histidine           1.8         22           1
 I isoleucine          1.9         24           2
 K lysine              4.6         57           2
 L leucine             9.9        124           3
 M methionine          1.6         20           1
 N asparagine          1.5         19           2
 P proline            12.0        150           3
 Q glutamine           4.0         50           3
 R arginine            7.8         98           3
 S serine              9.6        120           3
 T threonine           4.5         56           2
 V valine              4.8         60           2
 W tryptophan          0.8         10           1
 Y tyrosine            1.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NEZHA isoform 2 
KIAA1543              0.994   NEZHA isoform 1 
CAMSAP1L1             0.260   calmodulin regulated spectrin-associated protein 1-l...
CAMSAP1               0.138   calmodulin regulated spectrin-associated protein 1 ...
NACA                  0.019   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.019   myeloid/lymphoid or mixed-lineage leukemia 2 
NEFH                  0.018   neurofilament, heavy polypeptide 200kDa 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
PCLO                  0.017   piccolo isoform 2 
PCLO                  0.017   piccolo isoform 1 
GLTSCR1               0.016   glioma tumor suppressor candidate region gene 1 [Ho...
PELP1                 0.015   proline, glutamic acid and leucine rich protein 1 [...
C2orf55               0.015   hypothetical protein LOC343990 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
FSCB                  0.015   fibrous sheath CABYR binding protein 
PRG4                  0.014   proteoglycan 4 isoform D 
PRG4                  0.014   proteoglycan 4 isoform C 
PRG4                  0.014   proteoglycan 4 isoform B 
PRG4                  0.014   proteoglycan 4 isoform A 
BAT2                  0.014   HLA-B associated transcript-2 
ANKRD11               0.014   ankyrin repeat domain 11 
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
MAP7D1                0.014   MAP7 domain containing 1 
SPEG                  0.014   SPEG complex locus 
ENAH                  0.014   enabled homolog isoform b 
MLL4                  0.014   myeloid/lymphoid or mixed-lineage leukemia 4 
CASKIN2               0.014   cask-interacting protein 2 isoform b 
CASKIN2               0.014   cask-interacting protein 2 isoform a 
SAMD1                 0.014   sterile alpha motif domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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