SMTN 11586

Name: SMTN	Sequence: fasta or formatted (917aa)		NCBI GI: 19913394
Description: smoothelin isoform c		Referenced in: Muscle
Other entries for this name: alt prot [915aa] smoothelin isoform b alt prot [940aa] smoothelin isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 97 3 C cysteine 1.0 9 1 D aspartate 3.5 32 2 E glutamate 9.2 84 3 F phenylalanine 2.1 19 2 G glycine 7.1 65 2 H histidine 1.2 11 1 I isoleucine 1.7 16 1 K lysine 4.4 40 3 L leucine 8.4 77 3 M methionine 2.0 18 2 N asparagine 2.4 22 1 P proline 8.0 73 3 Q glutamine 5.1 47 2 R arginine 9.7 89 3 S serine 11.2 103 6 T threonine 7.0 64 3 V valine 4.6 42 2 W tryptophan 0.3 3 1 Y tyrosine 0.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 smoothelin isoform c SMTN 0.991 smoothelin isoform a SMTN 0.959 smoothelin isoform b SMTNL2 0.125 smoothelin-like 2 isoform 2 SMTNL2 0.125 smoothelin-like 2 isoform 1 SMTNL1 0.084 smoothelin-like 1 SPTB 0.043 spectrin beta isoform a SPTB 0.043 spectrin beta isoform b CYTSA 0.043 cytospin A CYTSA 0.043 cytospin A EHBP1L1 0.040 tangerin CYTSB 0.039 spectrin domain with coiled-coils 1 NSP5a3b CYTSB 0.039 spectrin domain with coiled-coils 1 NSP5b3b ACTN1 0.039 actinin, alpha 1 isoform c ACTN1 0.039 actinin, alpha 1 isoform a ACTN1 0.039 actinin, alpha 1 isoform b SPTBN4 0.038 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN1 0.037 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.037 spectrin, beta, non-erythrocytic 1 isoform 1 ACTN3 0.036 actinin, alpha 3 SPTBN2 0.035 spectrin, beta, non-erythrocytic 2 ACTN4 0.034 actinin, alpha 4 SPTBN5 0.034 spectrin, beta, non-erythrocytic 5 ACTN2 0.033 actinin, alpha 2 MICALL1 0.032 molecule interacting with Rab13 EHBP1 0.031 EH domain binding protein 1 isoform 3 EHBP1 0.031 EH domain binding protein 1 isoform 3 EHBP1 0.031 EH domain binding protein 1 isoform 2 EHBP1 0.031 EH domain binding protein 1 isoform 1 MICAL2 0.030 microtubule associated monoxygenase, calponin and LIM... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.