VCAM1 29662

Name: VCAM1	Sequence: fasta or formatted (739aa)		NCBI GI: 4507875
Description: vascular cell adhesion molecule 1 isoform a precursor		Referenced in: Cardiovascular System Additional Immunoglobulin-related Receptors
Other entries for this name: alt prot [647aa] vascular cell adhesion molecule 1 isoform b precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 32 2 C cysteine 2.6 19 1 D aspartate 4.3 32 2 E glutamate 8.5 63 2 F phenylalanine 3.0 22 2 G glycine 6.4 47 2 H histidine 1.1 8 1 I isoleucine 6.9 51 2 K lysine 7.0 52 3 L leucine 9.6 71 2 M methionine 2.6 19 1 N asparagine 3.7 27 2 P proline 5.3 39 1 Q glutamine 3.5 26 1 R arginine 3.1 23 1 S serine 10.1 75 2 T threonine 7.4 55 2 V valine 7.4 55 2 W tryptophan 0.8 6 1 Y tyrosine 2.3 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vascular cell adhesion molecule 1 isoform a precursor... VCAM1 0.472 vascular cell adhesion molecule 1 isoform b precurso... HMCN1 0.070 hemicentin 1 LOC100292387 0.067 PREDICTED: similar to hemicentin 2 HMCN2 0.063 PREDICTED: hemicentin 2 MXRA5 0.061 adlican HSPG2 0.059 heparan sulfate proteoglycan 2 IGSF10 0.056 immunoglobulin superfamily, member 10 HMCN2 0.054 PREDICTED: hemicentin 2 HMCN2 0.054 PREDICTED: hemicentin 2 TTN 0.054 titin isoform N2-A CD22 0.052 CD22 molecule ICAM5 0.049 intercellular adhesion molecule 5 precursor NCAM2 0.046 neural cell adhesion molecule 2 precursor MAG 0.043 myelin associated glycoprotein isoform a precursor [... MAG 0.043 myelin associated glycoprotein isoform b precursor [... CADM2 0.042 immunoglobulin superfamily, member 4D ROBO1 0.041 roundabout 1 isoform d ROBO1 0.041 roundabout 1 isoform c LOC642132 0.041 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.041 PREDICTED: similar to roundabout 1 isoform 2 NCAM1 0.040 neural cell adhesion molecule 1 isoform 1 NCAM1 0.040 neural cell adhesion molecule 1 isoform 3 ROBO1 0.040 roundabout 1 isoform b ROBO1 0.040 roundabout 1 isoform a NCAM1 0.036 neural cell adhesion molecule 1 isoform 2 SIGLEC1 0.036 sialoadhesin precursor CEACAM5 0.035 carcinoembryonic antigen-related cell adhesion molec... CNTN2 0.035 contactin 2 precursor CNTN6 0.033 contactin 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.