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Search of human proteins with 142976757
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|142976757 immediate early response 5 [Homo sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|142976757 immediate early response 5 [Homo sapiens] 687 0.0
gi|148727370 immediate early response 5-like [Homo sapiens] 91 1e-18
gi|48675811 immediate early response 2 [Homo sapiens] 83 3e-16
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 58 1e-08
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 57 2e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 2e-08
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 55 1e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 54 1e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens] 54 2e-07
gi|122937321 UNC homeobox [Homo sapiens] 52 9e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 51 1e-06
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 51 2e-06
gi|153792074 proline rich 12 [Homo sapiens] 49 6e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 49 8e-06
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 48 1e-05
gi|30795231 brain abundant, membrane attached signal protein 1 [... 48 1e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 1e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 1e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 48 1e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 48 1e-05
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 48 1e-05
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 48 1e-05
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 48 1e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 2e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 2e-05
gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo sap... 47 3e-05
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 47 3e-05
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 47 3e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 47 3e-05
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 46 4e-05
>gi|142976757 immediate early response 5 [Homo sapiens]
Length = 327
Score = 687 bits (1772), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGP 60
MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGP
Sbjct: 1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGP 60
Query: 61 AGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA 120
AGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA
Sbjct: 61 AGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA 120
Query: 121 TVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPL 180
TVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPL
Sbjct: 121 TVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPL 180
Query: 181 GGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK 240
GGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK
Sbjct: 181 GGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK 240
Query: 241 KPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPE 300
KPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPE
Sbjct: 241 KPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPE 300
Query: 301 AAEPGQICCDKPVLRDMNPWSTAIVAF 327
AAEPGQICCDKPVLRDMNPWSTAIVAF
Sbjct: 301 AAEPGQICCDKPVLRDMNPWSTAIVAF 327
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 91.3 bits (225), Expect = 1e-18
Identities = 90/275 (32%), Positives = 111/275 (40%), Gaps = 79/275 (28%)
Query: 1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGP 60
ME L+A ++SISL KI++SR QRGGIKLHKNLLVS VLR+ARQ+YLS+ LY
Sbjct: 1 MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQ 60
Query: 61 AGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA 120
PP Q A + P PA+ A +
Sbjct: 61 QQQQQQPPHHQHQHLA------YAAPGMPASAADF------------------------- 89
Query: 121 TVTGVGDVFQGGEADATEAA---------------------WSRVEGPRQAAAREAEGT- 158
G + GG+A+A E A + PR AA A G
Sbjct: 90 ---GPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAP 146
Query: 159 AGGWGVFPEV--SRAARRPCGCPLGGED-PPGTPAATPRAACCCAPQPAEDEPPAPPAVC 215
AGG G E+ A + P G P G+ P P AP P PPAP A+C
Sbjct: 147 AGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGP--------APLPLPLPPPAPAALC 198
Query: 216 PR-----KRCAAGVGGGPAGC-------PAPGSTP 238
PR C+A G P PAP S+P
Sbjct: 199 PRDPRAPAACSAPPGAAPPAAAASPPASPAPASSP 233
Score = 56.2 bits (134), Expect = 4e-08
Identities = 78/277 (28%), Positives = 100/277 (36%), Gaps = 61/277 (22%)
Query: 59 GPAGTPAPPPQQQPG-----EPAAGPPAGWGEPP---PPAARASWPETEPQPERSSVSDA 110
GPA P P P P +P A PA PP PPAA AS P P P S
Sbjct: 181 GPAPLPLPLPPPAPAALCPRDPRA--PAACSAPPGAAPPAAAAS-PPASPAP----ASSP 233
Query: 111 PRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSR 170
P + G+ Q D + VE G +
Sbjct: 234 GFYRGAYPTPSDFGLHCSSQTTVLDLDTHVVTTVEN----------------GYLHQDCC 277
Query: 171 AARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAG 230
A+ CP G+ PG P A C P ++E + A G+G P
Sbjct: 278 ASAH---CPCCGQGAPG-PGLASAAGCKRKYYPGQEEEEDD------EEDAGGLGAEP-- 325
Query: 231 CPAPGSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGRE 290
PG P +R + DA N++NLISIFGS FSGL+ + P
Sbjct: 326 ---PGGAPFAPCKRARFEDFCPDSSPDAS-----NISNLISIFGSGFSGLVSRQP----- 372
Query: 291 EEEGEESGPEAAEPGQICCDKPVLRDMNPWSTAIVAF 327
+ E+ P GQ+C K L + W+ AIVAF
Sbjct: 373 -DSSEQPPP---LNGQLCA-KQALASLGAWTRAIVAF 404
>gi|48675811 immediate early response 2 [Homo sapiens]
Length = 223
Score = 83.2 bits (204), Expect = 3e-16
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGL--YLA 58
ME + EA RI+++S+ K+Y+SR+QRGG++LH++L +SLV+RSAR++YLS L ++
Sbjct: 1 MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEALEPEVS 60
Query: 59 GPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVP 118
PA P+ P P E + + P + P E +S APR
Sbjct: 61 LPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPR---PAK 117
Query: 119 VATVTGVGDVFQGGEADATEAAWSRVE-------GPRQAAAREAEGTAGGWGVFPEVSRA 171
V+ + GG+A + +R+E + A R A G FP ++R
Sbjct: 118 VSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARV 177
Query: 172 ARRPCGCPLGGEDPPGTPAATPRAACCCAPQPA 204
+R L +PAA P A C +PA
Sbjct: 178 LQRRFSGLLN-----CSPAAPPTAPPACEAKPA 205
Score = 47.4 bits (111), Expect = 2e-05
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 43/191 (22%)
Query: 143 RVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQ 202
R+ PR+A + T G FPE P+ ++ P + CCAP+
Sbjct: 70 RLHPPREAESTAETATPDGEHPFPE-----------PMDTQEAP----TAEETSACCAPR 114
Query: 203 PAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEME 262
PA+ V ++R ++ GG AG P KK R ++ G + A+ ++
Sbjct: 115 PAK--------VSRKRRSSSLSDGGDAGL-----VPSKKARLEEKEEEEGASSEVADRLQ 161
Query: 263 ------TGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPEAAEPGQICCDKPVLRD 316
G NL + FSGLL SP + P A E C +P
Sbjct: 162 PPPAQAEGAFPNLARVLQRRFSGLLNCSPA-------APPTAPPACEAKPAC--RPADSM 212
Query: 317 MNPWSTAIVAF 327
+N A+VAF
Sbjct: 213 LNVLVRAVVAF 223
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 57.8 bits (138), Expect = 1e-08
Identities = 63/212 (29%), Positives = 74/212 (34%), Gaps = 33/212 (15%)
Query: 53 PGLYLAGPAGT-PAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAP 111
PG +GP P PPP QQ +P PP +PPP P PQP + P
Sbjct: 49 PGPGQSGPKPPIPPPPPHQQQQQP---PPQ---QPPPQQPPPHQPPPHPQPHQQQQPPPP 102
Query: 112 RVGDEVPVATVTGVGDVFQG-GEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSR 170
PV V QG G A +A P ++A A G P S
Sbjct: 103 PQDSSKPV--------VAQGPGPAPGVGSA-----PPASSSAPPATPPTSG---APPGSG 146
Query: 171 AARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPA- 229
P P PPG P TP ++ P PP PPA P G GP
Sbjct: 147 PGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGG 206
Query: 230 -------GCPAPGSTP-LKKPRRNLEQPPSGG 253
G P PG P L P + + P GG
Sbjct: 207 PKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGG 238
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 51 PCPGLYLAGPAGTPAPP--PQQQPGEPAAGPPAGWGEPPPPAARASWP-ETEPQPERSSV 107
P PG+ A PA + APP P P +GP G PPPA ++ P P P S V
Sbjct: 117 PAPGVGSAPPASSSAPPATPPTSGAPPGSGP--GPTPTPPPAVTSAPPGAPPPTPPSSGV 174
Query: 108 SDAP--RVGDEVPVATVTGVG 126
P G P A V G G
Sbjct: 175 PTTPPQAGGPPPPPAAVPGPG 195
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 57.4 bits (137), Expect = 2e-08
Identities = 64/212 (30%), Positives = 73/212 (34%), Gaps = 31/212 (14%)
Query: 59 GPAGTPAPPPQQQPGEPAA-----GPPAGWGEPPPP--AARASWPETEPQP-ERSSVSDA 110
GPAG P + P PA G P GEP PP A A P + QP + DA
Sbjct: 773 GPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDA 832
Query: 111 PRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSR 170
GD P G G A P AR + G G G FP +
Sbjct: 833 GAKGDAGPPGPAGPAGPPGPIGNVGA----------PGAKGARGSAGPPGATG-FPGAAG 881
Query: 171 AARRPCGCPLGGEDPPGTPAAT-------PRAACCCAPQPAEDEPPAPPAVCPRKRCAAG 223
P P G PPG P PR A +P E PP PP P +
Sbjct: 882 RVGPPG--PSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPG--PAGEKGSP 937
Query: 224 VGGGPAGCP-APGSTPLKKPRRNLEQPPSGGE 254
GPAG P PG + R + P GE
Sbjct: 938 GADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 969
Score = 42.7 bits (99), Expect = 4e-04
Identities = 56/186 (30%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 57 LAGPAGTP-APPPQQQPGEP----AAGPPAGWGEPPPPA---ARASWPETEPQPERSSVS 108
L G G P AP P G AAGPP G PP A + E PQ R S
Sbjct: 306 LPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEG 365
Query: 109 DAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEV 168
G+ P G G AD A P A A G G P
Sbjct: 366 PQGVRGEPGPPGPAGAAGPAGNPG-ADGQPGAKGANGAPGIAGAPGFPGARG-----PSG 419
Query: 169 SRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGP 228
+ P G P G PG P + P P + P PA KR A G GP
Sbjct: 420 PQGPGGPPG-PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARG-EPGP 477
Query: 229 AGCPAP 234
G P P
Sbjct: 478 TGLPGP 483
Score = 39.7 bits (91), Expect = 0.004
Identities = 54/207 (26%), Positives = 65/207 (31%), Gaps = 26/207 (12%)
Query: 57 LAGPAGTPAPP----PQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPR 112
L GP G P P P +PGEP A P G PP P + +P R P
Sbjct: 189 LPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPG 248
Query: 113 VGDEVPVATVTGVGDV-----FQGGEADATEAAWSRVEG-PRQAAAREAEGTAGGWGVFP 166
+ G+ + F G + +A + +G P A G G G+
Sbjct: 249 PQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPG 308
Query: 167 EVSR-AARRPCGC--------------PLGGEDPPGTPAATPRAACCCAPQPAEDEPPAP 211
E R A P G P G PPG P A P E P
Sbjct: 309 ERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQG 368
Query: 212 PAVCPRKRCAAGVGGGPAGCPAPGSTP 238
P AG GPAG P P
Sbjct: 369 VRGEPGPPGPAG-AAGPAGNPGADGQP 394
Score = 37.0 bits (84), Expect = 0.024
Identities = 54/193 (27%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 59 GPAGTPAPP-PQQQPGEPAA-GPPAGWGEPPPPAARASWPETEPQPERSSVS----DAPR 112
GP G PP P + G+ A G P G P PP R P + P V+ A
Sbjct: 452 GPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGG-PGSRGFPGADGVAGPKGPAGE 510
Query: 113 VGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAA 172
G P G+ + GEA A+ G+ G G P+
Sbjct: 511 RGSPGPAGPKGSPGEAGRPGEAGL-------------PGAKGLTGSPGSPG--PDGKTGP 555
Query: 173 RRPCGCPLGGEDPPGTPAATPRAACCCAPQP--AEDEP--------PAPP-AVCPRKRCA 221
P G G PPG P A +A P P A EP P PP AV P +
Sbjct: 556 PGPAGQD-GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 614
Query: 222 AGVGGGPAGCPAP 234
GP G P
Sbjct: 615 EAGAQGPPGPAGP 627
Score = 35.8 bits (81), Expect = 0.053
Identities = 63/219 (28%), Positives = 74/219 (33%), Gaps = 40/219 (18%)
Query: 59 GPAGTPA----PPPQQQPGEPAA----GPPAGWGEPPPPAARASWPETEPQPERSSVSDA 110
GPAG+P P P PGE G P G P P AR P V
Sbjct: 635 GPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGE----RGFPGERGVQGP 690
Query: 111 PRVGDEVPVATVTGVGDVFQGGEADATEAAWSR-------VEGPRQAAA----REAEGTA 159
P G P G+ G+A A A S+ + G R AA + G A
Sbjct: 691 P--GPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDA 748
Query: 160 GGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKR 219
G G + R P+G PPG PA AP + P+ PA R
Sbjct: 749 GPKGADGSPGKDGVRGLTGPIG---PPG-PAG--------APGDKGESGPSGPAGPTGAR 796
Query: 220 CAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDA 258
A G G P PG P QP + GE DA
Sbjct: 797 GAPGDRGEPG---PPGPAGFAGPPGADGQPGAKGEPGDA 832
Score = 35.0 bits (79), Expect = 0.091
Identities = 61/229 (26%), Positives = 69/229 (30%), Gaps = 36/229 (15%)
Query: 57 LAGPAGTPAPP-PQQQPGE---PAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPR 112
L GP+G P P GE P P G PP + R P E P R A
Sbjct: 975 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKG 1034
Query: 113 VGDEVPVATVTGV-------GDVFQGGEA-DATEAAWSRVEGP-RQAAAREAEGTAGGWG 163
E A G G V G++ D E + GP AR G G G
Sbjct: 1035 DRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRG 1094
Query: 164 VFPEVSRAARRPCGCPLGG---EDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRC 220
E R G + PPG P + A PA P A P K
Sbjct: 1095 DKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDG 1154
Query: 221 AAGVGG--------------GPAGCPAPGSTPLKKPRRNLEQPPSGGED 255
G+ G GP G P P P PPS G D
Sbjct: 1155 LNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPP------GPPGPPSAGFD 1197
Score = 32.0 bits (71), Expect = 0.77
Identities = 53/203 (26%), Positives = 65/203 (32%), Gaps = 32/203 (15%)
Query: 54 GLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPP-----PPAARASWPETEPQPERSSVS 108
G+ + GP G P + PG P A P G+ PP P A+ P P P +
Sbjct: 174 GISVPGPMGPSGP--RGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGD 231
Query: 109 DAP-----RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE-AEGTAGGW 162
D R G+ P QG A ++G R + + A+G AG
Sbjct: 232 DGEAGKPGRPGERGPPGP--------QGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPA 283
Query: 163 GVFPEVSRAARR-------PCGCP--LGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPA 213
G E P G P G PG A A P PA P
Sbjct: 284 GPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP 343
Query: 214 VCPRKRCAAGVGG--GPAGCPAP 234
P A G G GP G P
Sbjct: 344 GFPGAVGAKGEAGPQGPRGSEGP 366
Score = 30.4 bits (67), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 58 AGPAGTPAPP-PQQQPGEPAAGPPAGWGEPPPPAARA 93
AGP G P PP P PG P+AG + P PP +A
Sbjct: 1174 AGPVGPPGPPGPPGPPGPPSAGFDFSF-LPQPPQEKA 1209
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 2e-08
Identities = 61/222 (27%), Positives = 78/222 (35%), Gaps = 30/222 (13%)
Query: 49 SDPCPGLYLAGPAGTPAPP-PQQQPGEPAAGPPAGWGEPPPPAAR-ASWPE--TEPQPER 104
S P P G PA P P+ P PAA PP+ G P P+ + A P T P P+
Sbjct: 916 SSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKG 975
Query: 105 SSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGV 164
+ +P+ P AT +GG A + +G A G
Sbjct: 976 GPATPSPKGAPTPPAATPPSP----KGGPATPSP------KGAPTPPAVTPPSPKGSPAA 1025
Query: 165 FPEVSRAARRPCGCPLGGEDPPGTPAATPR--------AACCCAPQPAEDEP-----PAP 211
P A+ P P P G+PAATP AA +P+ P P P
Sbjct: 1026 TPFPKGASTPPAATP---PSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082
Query: 212 PAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGG 253
PA P P G P P + P+ L PP G
Sbjct: 1083 PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Score = 57.0 bits (136), Expect = 2e-08
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 37/213 (17%)
Query: 62 GTPAPPPQQQPGEPAAGPPA---GWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVP 118
G PPP+ P PAA PP+ G PPP A + T P P+ + +P+ P
Sbjct: 1139 GLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1198
Query: 119 VATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGC 178
AT +GG A + +G A GG P A P
Sbjct: 1199 AATPPSP----KGGLATPSP------KGAPTTPAATPPSPKGGLAT-PSPKGAPTTPAAT 1247
Query: 179 PLGGEDPPGTP----AATPRAAC-------------CCAPQPAEDEPPAP---PAVCPRK 218
P + P TP A TP AA AP PA PP+P PA P K
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 219 RCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPS 251
P P+P +P P + PP+
Sbjct: 1308 GAPTPPAATP---PSPKGSPGTPPPKGAPTPPA 1337
Score = 50.8 bits (120), Expect = 2e-06
Identities = 57/212 (26%), Positives = 71/212 (33%), Gaps = 24/212 (11%)
Query: 60 PAGTPAPP-PQQQPGEPAAGPPA---GWGEPPPPAARASWPETEPQPERSSVSDAPRVGD 115
P G PA P P+ P PAA PP+ G PP A + T P P+ + P+
Sbjct: 1090 PKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAP 1149
Query: 116 EVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRP 175
P AT +GG A +G A GG P A P
Sbjct: 1150 TTPAATPPSP----KGGLATPPP------KGAPTTPAATPPSPKGGLAT-PSPKGAPTTP 1198
Query: 176 CGCP---LGG------EDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGG 226
P GG + P TPAATP + P+ P PA P
Sbjct: 1199 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP 1258
Query: 227 GPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDA 258
P G P P + + L PP G + A
Sbjct: 1259 PPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Score = 46.6 bits (109), Expect = 3e-05
Identities = 57/225 (25%), Positives = 72/225 (32%), Gaps = 43/225 (19%)
Query: 51 PCPGLYLAGPAGTPAPP---PQQQPGEPAAGPPAGWGEPPP-----PAARASWPETEPQP 102
P G + P G P PP P G P PP G PP P + P T P
Sbjct: 1297 PKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSS 1356
Query: 103 ERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGW 162
+ + + + G P AT + G GP G A
Sbjct: 1357 KGGPTTPSSKEGPTPPAATPSHKG-------------------GPAMTPPSPKRGPA--- 1394
Query: 163 GVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAA 222
P P PL + P TP AA P++ + PPAV P A
Sbjct: 1395 --IPSPKGDPTSPAVIPLSPKKAPATPVTREGAA-----TPSKGD-LTPPAVTPVSLKKA 1446
Query: 223 GVGGGPAGCPAPGSTPLKK--PRRNLEQPPSGGEDDDAEEMETGN 265
P G PA TP K P PPS E +++ T +
Sbjct: 1447 PATSAPKGGPA---TPSSKGDPTLPAVTPPSPKEPPAPKQVATSS 1488
Score = 43.9 bits (102), Expect = 2e-04
Identities = 58/215 (26%), Positives = 70/215 (32%), Gaps = 27/215 (12%)
Query: 53 PGLYLAGPAGTPAPPPQQ-QPGEPAAGPPA---GWGEPPPPAARASWPETEPQPERSSVS 108
P L P G PA P + P PAA PP+ G P P A T P P+ +
Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT 1119
Query: 109 DAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFP-- 166
+ P AT +GG A +G A GG P
Sbjct: 1120 PPHKGAPTTPAATPPSP----KGGLATPPP------KGAPTTPAATPPSPKGGLATPPPK 1169
Query: 167 --EVSRAARRPCGCPLGG------EDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRK 218
+ AA P P GG + P TPAATP + P+ P PA P
Sbjct: 1170 GAPTTPAATPP--SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1227
Query: 219 RCAAGVGGGPAGCP-APGSTPLKKPRRNLEQPPSG 252
P G P P +TP PP G
Sbjct: 1228 PKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKG 1262
Score = 39.3 bits (90), Expect = 0.005
Identities = 53/200 (26%), Positives = 70/200 (35%), Gaps = 23/200 (11%)
Query: 58 AGPAGTPAPPPQQ-QPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDE 116
+ P G PA P + P PA PP+ EPP P A+ + P + AP +
Sbjct: 1450 SAPKGGPATPSSKGDPTLPAVTPPSP-KEPPAPKQVATSSSPKKAPATPAPMGAPTLPAV 1508
Query: 117 VPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPC 176
+P + + A A + P A +EA P+ + A P
Sbjct: 1509 IPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPK 1568
Query: 177 GCPL--GGEDPPGTPAATPRAACCCAPQPAE------------DEPPAPPAVCPRKRCAA 222
P ++ PA TP + AP P E E P PPAV P
Sbjct: 1569 EAPATPSSKEASSPPAVTP-STYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTP-----P 1622
Query: 223 GVGGGPAGCPAPGSTPLKKP 242
GPA PAP TP P
Sbjct: 1623 SPEKGPA-TPAPKGTPTSPP 1641
Score = 38.1 bits (87), Expect = 0.011
Identities = 42/177 (23%), Positives = 58/177 (32%), Gaps = 29/177 (16%)
Query: 79 PPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATE 138
PP+ G P P A P+ P + E P +V + +G A
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPPK-----------ETPTPSVVNLPFPKEGPATPA-- 904
Query: 139 AAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGG--EDPPGTPAATPRAA 196
P+QA A ++ P+ +RA P G P + P PAATP +
Sbjct: 905 --------PKQAPALSMTSSS------PKKARATPAPKGIPASPSPKGAPTPPAATPPSP 950
Query: 197 CCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGG 253
P+ P PPA P P G P P + P+ P G
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG 1007
Score = 35.8 bits (81), Expect = 0.053
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 47 YLSDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSS 106
Y P P L PA T +P P++ P PA PP+ P PA + + T P SS
Sbjct: 1590 YKGAPSPKELLIPPAVT-SPSPKEAPTPPAVTPPSPEKGPATPAPKGT--PTSPPVTPSS 1646
Query: 107 VSDAP--------RVGDEVPVAT 121
+ D+P ++G VP A+
Sbjct: 1647 LKDSPTSPASVTCKMGATVPQAS 1669
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 59 GPAGTPAPPP----QQQPGEPAAGPPAGW---GEPPPPAARASWPETE-------PQPER 104
GP T AP P Q+ + A G A G PP ++AS P T P+PE
Sbjct: 1728 GPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPES 1787
Query: 105 SSVSDAPRVGDEVPVA 120
+SVS AP +P+A
Sbjct: 1788 ASVSAAPSPPVSLPLA 1803
Score = 33.5 bits (75), Expect = 0.26
Identities = 45/198 (22%), Positives = 59/198 (29%), Gaps = 41/198 (20%)
Query: 60 PAGTPAPPPQQQPGEPAAGP-----PAGWGEPPPPAARASWPETEPQPERSSVSDAPRVG 114
PA T +P P G P P G PP S P P+ + AP+
Sbjct: 850 PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNL-PFPKEGPATPAPK-- 906
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARR 174
+ P ++T P++A A A G P A
Sbjct: 907 -QAPALSMTS--------------------SSPKKARATPAPK---GIPASPSPKGAPTP 942
Query: 175 PCGCPLGGEDPPGTP---------AATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVG 225
P P + P TP AATP + P+ P PPA P
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPAT 1002
Query: 226 GGPAGCPAPGSTPLKKPR 243
P G P P + P+
Sbjct: 1003 PSPKGAPTPPAVTPPSPK 1020
Score = 32.0 bits (71), Expect = 0.77
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 60 PAGTP-----APPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVG 114
PA TP AP P++ PA P+ P PPA T P PE+ + AP+
Sbjct: 1583 PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAV------TPPSPEKGPATPAPKGT 1636
Query: 115 DEVPVATVTGVGD 127
P T + + D
Sbjct: 1637 PTSPPVTPSSLKD 1649
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 54.7 bits (130), Expect = 1e-07
Identities = 80/290 (27%), Positives = 99/290 (34%), Gaps = 43/290 (14%)
Query: 57 LAGPAGTPA---PPPQQQPGEPAAGPPAGW--GEPPP--PAARASWPETE----PQPERS 105
LA P P PP G P GP G GE PP P A A+ E P+ S
Sbjct: 341 LAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPATDKAEEVVCAPEDVAS 400
Query: 106 SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGT------- 158
A GD P T + AT A S +GP ++ +EAE T
Sbjct: 401 PFPTAIPEGDTTPPET-----------DPAATSEAPSARDGPERSVPKEAEPTPPVLPDE 449
Query: 159 -AGGWGVFPEVSRAARRPCGCPLG------GEDPPGTPAATPRAACCC---APQPAEDEP 208
G G PE R A G G +P PA +P A C P A + P
Sbjct: 450 EKGPPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGP 509
Query: 209 PAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVAN 268
A P + + + V GP A + P + E PP+G E E A
Sbjct: 510 AASPPLAAAE--SPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAE 567
Query: 269 LISIFGSSFSGL-LRKSPGGGREEEEGEESGPEAAEPGQICCDKPVLRDM 317
L S S R PG R E P A G + + L D+
Sbjct: 568 LRGAKKFSVSSCRARPRPGVSRPLERASGRLP-LARSGPVWRSEAALDDL 616
Score = 33.9 bits (76), Expect = 0.20
Identities = 71/282 (25%), Positives = 98/282 (34%), Gaps = 58/282 (20%)
Query: 67 PPQQQPGEPAAGPPAGWGEPPPPAARASWPE--TEPQPERSSVSDAPRVGDEVPVATVTG 124
P + P E PP E P A PE E +PER + ++ R+G E A
Sbjct: 431 PERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERIGTEPSTA---- 486
Query: 125 VGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGED 184
A + A S ++ R AAA E G P ++ A E
Sbjct: 487 --------PAPSPPAPKSCLK-HRPAAASE------GPAASPPLAAA-----------ES 520
Query: 185 PPGTPAATPRAACCCAPQ-PAEDEPPAPPAVCPR-------KRCAAGVGGGP----AGC- 231
PP P A AP+ P + APPA R +R A + G + C
Sbjct: 521 PPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCR 580
Query: 232 --PAPG-STPLKKPRRNLEQPPSG------GEDDDAEEMETGNVA----NLISIFGSSFS 278
P PG S PL++ L SG DD + + A ++ G S
Sbjct: 581 ARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDS 640
Query: 279 GLLRKSPGGGREEEEGEESGPEAAEPGQICCDKPVLRDMNPW 320
G SP G R+ + + P EP + D NP+
Sbjct: 641 GDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPF 682
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 54.3 bits (129), Expect = 1e-07
Identities = 66/225 (29%), Positives = 82/225 (36%), Gaps = 32/225 (14%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAAR------ASWPETEPQ--PER 104
PGL P G+P PPP P AG P A R A+ PE+ P+ P R
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTR 81
Query: 105 SSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE--AEGTAGGW 162
+S A G+ P A T G V G A T + + +A E A G A
Sbjct: 82 TSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEA 141
Query: 163 GVFPEVSRAARRPCGCPLGGEDPP---------GTPAATPRAACCCAPQP---------- 203
+S ARR P G P GT PR A P+P
Sbjct: 142 PKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVS 201
Query: 204 -AEDEPPAPPAVCPRKRCAAGVG-GGPAGCPAPGS-TPLKKPRRN 245
A + P+ R+R +AG G PA S TPL P R+
Sbjct: 202 SASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 246
Score = 39.3 bits (90), Expect = 0.005
Identities = 47/202 (23%), Positives = 68/202 (33%), Gaps = 21/202 (10%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPER-SSVSDAP 111
P A P P PP P P+A PP + PPP A +P P+ +++ P
Sbjct: 432 PPSLAAPPLQVPPSPPASPPMSPSATPPP---QAPPPLAAPPLQLAKPPPQAPPALATPP 488
Query: 112 RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRA 171
P A+ G + A + P AA + P S
Sbjct: 489 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS-----PPASPT 543
Query: 172 ARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGC 231
+ P P G P T + PR AP PP PP+ P ++ + G
Sbjct: 544 LQAPRRPPTPG---PDTSVSGPRLTLALAP-----GPPPPPSRSP----SSTLSGPDLAG 591
Query: 232 PAPGSTPLKKPRRNLEQPPSGG 253
+ +T + R + P GG
Sbjct: 592 HSSSATSTPEELRGYDSGPEGG 613
Score = 35.8 bits (81), Expect = 0.053
Identities = 57/223 (25%), Positives = 67/223 (30%), Gaps = 44/223 (19%)
Query: 57 LAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASW-------PETEPQPERSSVSD 109
L P P PP Q P P A PP PP A S P + P S S
Sbjct: 397 LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 456
Query: 110 APRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFP--- 166
P P+A A + A + P A + FP
Sbjct: 457 TPPPQAPPPLA-------------APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 503
Query: 167 EVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPA----VCPRKRCAA 222
S +A P PL PP P A P A P PP+PPA PR+
Sbjct: 504 PFSPSASLPMS-PLA--TPP--PQAPPVLAA-----PLLQVPPSPPASPTLQAPRRPPTP 553
Query: 223 GVGGGPAG-------CPAPGSTPLKKPRRNLEQPPSGGEDDDA 258
G +G P P P + P L P G A
Sbjct: 554 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSA 596
Score = 34.3 bits (77), Expect = 0.16
Identities = 42/149 (28%), Positives = 49/149 (32%), Gaps = 41/149 (27%)
Query: 56 YLAGPAGTPA--PPPQQQPGEPAAGPPAGW--GEPPP------PAARASWPETEPQPERS 105
Y +GP G A PPP E AA PA W G PP P A WP
Sbjct: 606 YDSGPEGGAAASPPPD---AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSAD 662
Query: 106 SV-----SDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE------ 154
+ ++ P P A G GG+A A A + P+QA E
Sbjct: 663 GLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGAL 722
Query: 155 -----------------AEGTAGGWGVFP 166
AEG AGG G P
Sbjct: 723 QASVVQHLLSRTLLLAAAEGAAGGSGGGP 751
Score = 33.1 bits (74), Expect = 0.35
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 21/173 (12%)
Query: 84 GEPPPPAARASWPE-TEPQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWS 142
G P P AR S TE R + S PR E P +V+ + + A S
Sbjct: 161 GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPS 220
Query: 143 RVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQ 202
G ++ A+R +A +S AR G GTP A + P+
Sbjct: 221 AGGGLQRPASRSLSSSA------TPLSSPAR-------SGPSARGTPRAPAHPS---QPK 264
Query: 203 PAEDEPPAPPAVCP-RKRCAAGVG---GGPAGCPAPGSTPLKKPRRNLEQPPS 251
P + PP V P RK A +G P P+P + P +L+ PS
Sbjct: 265 PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPS 317
Score = 32.0 bits (71), Expect = 0.77
Identities = 52/198 (26%), Positives = 67/198 (33%), Gaps = 21/198 (10%)
Query: 56 YLAGPAGTP-APPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVG 114
+L P +P A PP Q P PA P P PPA+ P P P+ AP
Sbjct: 341 FLPSPPLSPLATPPPQAP--PALALPPLQAPPSPPASPPLSPLATPSPQ------APN-- 390
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARR 174
V + F + +A +S P + + A P +
Sbjct: 391 ----ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 446
Query: 175 PCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCP-- 232
P P+ P A P AA Q A+ P APPA+ A + PA P
Sbjct: 447 PASPPMSPSATPPPQAPPPLAA--PPLQLAKPPPQAPPALATPPLQA--LPSPPASFPGQ 502
Query: 233 APGSTPLKKPRRNLEQPP 250
AP S P L PP
Sbjct: 503 APFSPSASLPMSPLATPP 520
Score = 30.4 bits (67), Expect = 2.2
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 13/76 (17%)
Query: 188 TPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVG-----------GGPAGCPAPGS 236
TPAA RA P+P P PP R G GG G P S
Sbjct: 16 TPAA--RAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES 73
Query: 237 TPLKKPRRNLEQPPSG 252
P P R P SG
Sbjct: 74 APRAGPTRTSRPPASG 89
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 53.9 bits (128), Expect = 2e-07
Identities = 75/265 (28%), Positives = 91/265 (34%), Gaps = 60/265 (22%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPR 112
P AGP P PPP P EP A PPP A P P VS P
Sbjct: 1181 PASEQAGPPELPPPPP---PAEPPPTDLAHLPPLPPPEGEARKPAKPP------VSPKPV 1231
Query: 113 VGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAA 172
+ VP QG ++ + GP + A GT P A
Sbjct: 1232 LTQPVP---------KLQGSPTPTSKKV--PLPGPGSPEVKRAHGTPPPVSPKPPPPPTA 1280
Query: 173 RRP----CGCPLG--GEDPPGTPAATPRAACCCAP--------QPAEDEPPAPPAV-CPR 217
+P G P G G P +PA P AA P PA+ P PA+ P
Sbjct: 1281 PKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPA 1340
Query: 218 K--RCAAGVGGGPAGCPAP--GSTPLKKPRRNLE------------------QPPSGGED 255
K R AA A PAP G++P R+ LE Q + G
Sbjct: 1341 KPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGPR 1400
Query: 256 DDAEEMETGNVANLISIFGSSFSGL 280
D A E TG++ + I GS F L
Sbjct: 1401 DSAAEKSTGSILDDI---GSMFDDL 1422
Score = 28.5 bits (62), Expect = 8.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAG-----WGEPPP 88
+GP +PA PP+ G + PP +GE PP
Sbjct: 427 SGPGDSPAKPPEGSAGVARSQPPVAHAGQVYGEQPP 462
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 51.6 bits (122), Expect = 9e-07
Identities = 68/238 (28%), Positives = 89/238 (37%), Gaps = 37/238 (15%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPR 112
PG + +G AGT AP P PGEP P G +P ++ S +P+P R + DA
Sbjct: 257 PGAHASGAAGT-APAP---PGEP---PAPGTCDPAFYPSQRSGAGPQPRPGRPADKDAAS 309
Query: 113 VGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAA 172
G VA V + E+ S R+AA+ A A G P + A
Sbjct: 310 CGPGAAVAAVERGAAGLPKASPFSVESLLSDSPPRRKAASNAAAAAAAGLDFAPGLPCAP 369
Query: 173 RR----------PCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAA 222
R P PLG P A A AP+ A P PPA P + +
Sbjct: 370 RTLIGKGHFLLYPITQPLGFLVPQA--ALKGGAGLEPAPKDAPPAPAVPPA--PPAQASF 425
Query: 223 GVGGGPAGCP-------------APGS-TPLKKPRRNLEQPPS--GGEDDDAEEMETG 264
G GP G P +PG+ P P R+L + GG D A+ G
Sbjct: 426 GAFSGPGGAPDSAFARRSPDAVASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAG 483
Score = 35.0 bits (79), Expect = 0.091
Identities = 45/167 (26%), Positives = 53/167 (31%), Gaps = 50/167 (29%)
Query: 50 DPCPGLYLAGPAGTPAPPPQQQPGE---PAAGPPAGWGEPPPPA-ARASWPETEPQPERS 105
+P P PA PAPP Q G P P + + P A A P P P R
Sbjct: 403 EPAPKDAPPAPAVPPAPPAQASFGAFSGPGGAPDSAFARRSPDAVASPGAPAPAPAPFRD 462
Query: 106 SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVF 165
S A +GG D +A GTAG
Sbjct: 463 LASAAAT-----------------EGGGGDCADA-----------------GTAGP---- 484
Query: 166 PEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPP 212
A P P G PP +PA P A C P+P P+PP
Sbjct: 485 -----APPPPAPSPRPGPRPP-SPAEEP--ATCGVPEPGAAAGPSPP 523
Score = 28.9 bits (63), Expect = 6.5
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGEP-------PPPAARASWPETE 99
AG AG PAPPP P PP+ EP P AA S PE E
Sbjct: 479 AGTAG-PAPPPPAPSPRPGPRPPSPAEEPATCGVPEPGAAAGPSPPEGE 526
Score = 28.5 bits (62), Expect = 8.5
Identities = 45/176 (25%), Positives = 58/176 (32%), Gaps = 45/176 (25%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPR 112
P L G AG P P+ P PA PPA PP A+ ++ P+ + +P
Sbjct: 392 PQAALKGGAGLE-PAPKDAPPAPAV-PPA----PPAQASFGAFSGPGGAPDSAFARRSP- 444
Query: 113 VGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAA 172
+A A+ A + P + A A T GG G + A
Sbjct: 445 --------------------DAVASPGAPAPAPAPFRDLA-SAAATEGGGGDCADAGTAG 483
Query: 173 RRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGP 228
P PP PA +PR P P P PA C A G P
Sbjct: 484 PAP---------PP--PAPSPR------PGPRPPSPAEEPATCGVPEPGAAAGPSP 522
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/280 (24%), Positives = 89/280 (31%), Gaps = 39/280 (13%)
Query: 53 PGLYLAGPAGTPAPP-------PQQQPGEPAAGPPAGWGEP--PPPAARASWPETEPQPE 103
P L P G P+P P PG+P PP G +P PPP + P P
Sbjct: 29 PSLIAGNPQG-PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-----PP 82
Query: 104 RSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWG 163
+ S +PR P G+ QG + +G + G G
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPP 142
Query: 164 VFPEVSRAARRPCG-----CPLGGEDPPGTP-------AATPRAACCCAPQPAEDEPPAP 211
+ SR+ R P G P GG P G P P+ P +P P
Sbjct: 143 PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202
Query: 212 PAVCPRKRCAAGVGGGPAGCPAPGST----PLKKPRRNLEQPPSGGEDDDAEE---METG 264
P + R + G P G P G P P + PP GG G
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 262
Query: 265 NVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPEAAEP 304
A G S S R PG + + E + P+ P
Sbjct: 263 PPAQ-----GGSKSQSARSPPGKPQGPPQQEGNNPQGPPP 297
Score = 45.8 bits (107), Expect = 5e-05
Identities = 51/189 (26%), Positives = 67/189 (35%), Gaps = 28/189 (14%)
Query: 60 PAGTPAPPPQQ----------QPGEPAAGPPAGWGEP--PPPAARASWPETEPQPERSSV 107
P G P PP Q PG+P PP G +P PPP + P + RSS
Sbjct: 154 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQ 213
Query: 108 SDAPRVGDEVPVATVTGVGDVFQGGEADATEA-AWSRVEGPRQAAAREAEGTAGGWGVFP 166
S + P G G+ ++ +GP + GG
Sbjct: 214 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGG----- 268
Query: 167 EVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPA---EDEPPAPPAVCPRKRCAAG 223
S++AR P G P G PP P+ P PA +P APPA P+
Sbjct: 269 SKSQSARSPPGKPQG---PPQQEGNNPQG----PPPPAGGNPQQPQAPPAGQPQGPPRPP 321
Query: 224 VGGGPAGCP 232
GG P+ P
Sbjct: 322 QGGRPSRPP 330
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 50.8 bits (120), Expect = 2e-06
Identities = 58/203 (28%), Positives = 73/203 (35%), Gaps = 27/203 (13%)
Query: 51 PCPGLYLAG-----PAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERS 105
P P YLA G P PP + P E P W A+ P + +P +
Sbjct: 829 PPPPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKE 888
Query: 106 SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVF 165
A G E GVG QG E+ GPR ++R G+
Sbjct: 889 ET--AQLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRR--------GIP 938
Query: 166 PEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAE--DEPPAPPAVCPRKRCAAG 223
PE A R G P+ PP P P+P E DE P PP P K G
Sbjct: 939 PEEPGAPPRRAG-PIKKPPPPTKVEELP-------PKPLEQGDETPKPPKPDPLK-ITKG 989
Query: 224 VGGGPAGCPAPGS-TPLKKPRRN 245
GGP P G+ +P + RR+
Sbjct: 990 KLGGPKETPPNGNLSPAPRLRRD 1012
Score = 42.0 bits (97), Expect = 7e-04
Identities = 72/254 (28%), Positives = 89/254 (35%), Gaps = 52/254 (20%)
Query: 50 DPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSD 109
DP GL P+G P PP + P PP P PP P P P+ S
Sbjct: 230 DPRGGLQ---PSGPPQFPPYRGMMPPFMYPPY---LPFPPPYGPQGPYRYPTPD--GPSR 281
Query: 110 APRV----GDEVPVATVTGVG---------------------DVFQGG--EADATEAA-W 141
PRV G P+ V VG D + G E D TE +
Sbjct: 282 FPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKF 341
Query: 142 SRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAP 201
S E R + AEG S R P G P P TP+ A
Sbjct: 342 SDEEDGRDSDEEGAEGHRDS----QSASGEERPPEADGKKGNSPNSEPP-TPKTAWAETS 396
Query: 202 QPAEDEP--PAP-PAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDA 258
+P E EP PAP P + P R AG G P P G P K PP+ ++D+A
Sbjct: 397 RPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCK--------PPAPEDEDEA 448
Query: 259 EEMETGNVANLISI 272
++ IS+
Sbjct: 449 WRQRRKQSSSEISL 462
Score = 38.5 bits (88), Expect = 0.008
Identities = 41/155 (26%), Positives = 55/155 (35%), Gaps = 18/155 (11%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEV 117
A PA PA P P P A P P PP A A PETEP+ + AP
Sbjct: 506 AEPAAPPAAP--STPAPPPAVPKELPAPPAPPPASAPTPETEPE----EPAQAP-PAQST 558
Query: 118 PVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCG 177
P V + GG + ++ ++ S P + EG PE P
Sbjct: 559 PTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEG--------PEPPEEVPPPTT 610
Query: 178 CPLGGEDPPGT---PAATPRAACCCAPQPAEDEPP 209
P+ +P G P P + P+ + PP
Sbjct: 611 PPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPP 645
Score = 38.1 bits (87), Expect = 0.011
Identities = 62/246 (25%), Positives = 79/246 (32%), Gaps = 50/246 (20%)
Query: 62 GTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVAT 121
G PAP P P P GP WG P R P P PE DE
Sbjct: 404 GPPAPKPPLPP--PHRGPAGNWGPPGDYPDRGGPPCKPPAPE-----------DE----- 445
Query: 122 VTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLG 181
+ ++ ++ VE R+ E + R C L
Sbjct: 446 ----DEAWRQRRKQSSSEISLAVERARRRREEEER----------RMQEERRAACAEKLK 491
Query: 182 GEDPP-GTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK 240
D G P +A A PA PAPP P++ A PA PA TP
Sbjct: 492 RLDEKFGAPDKRLKAE--PAAPPAAPSTPAPPPAVPKELPAP-----PAPPPASAPTPET 544
Query: 241 KPRRNLEQPPSGGEDDDAEEMETGNVA---NLISIFGSSFSGLLRKSPGGGREEEEGEES 297
+P + PP A+ T VA L+S GS+ S E + +
Sbjct: 545 EPEEPAQAPP-------AQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKE 597
Query: 298 GPEAAE 303
GPE E
Sbjct: 598 GPEPPE 603
Score = 30.4 bits (67), Expect = 2.2
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 60 PAGTPAPPP-QQQPGEPAAGPPAGWGEPPP-PAARASWPETEPQP 102
PA PAPPP P PA PP+ PPP PA R P P
Sbjct: 1998 PAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFP 2042
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 48.9 bits (115), Expect = 6e-06
Identities = 61/219 (27%), Positives = 78/219 (35%), Gaps = 38/219 (17%)
Query: 33 NLLVSLVLRSARQVYLSDPCPGLY-LAGPAGTPAPPPQQQPGEPAA-----GPPAGWGEP 86
NLL S SA P LY +G A P PP + P + P + P
Sbjct: 246 NLLAS---SSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPP 302
Query: 87 PPPAARA---------SWPETEPQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADAT 137
PPP A A S+P R++++ +P G E G G+ + G + AT
Sbjct: 303 PPPPAHALQHYLSCGGSYPS---MGHRANLACSPLGGGEPS----PGAGEPSKAGPSGAT 355
Query: 138 EAAWSRVEGPRQAAAREAEGTAGGWGVFPEVS----RAARRPCGCPLGGEDPPGTPAATP 193
A R GP A A G GG G P + + + G GG P P +T
Sbjct: 356 AGASGRATGPEAAGGGGAGG--GGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTA 413
Query: 194 RAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCP 232
C PA A K AG GG A P
Sbjct: 414 TPKCQSLGGPA-------AAYATGKASGAGGAGGQAYSP 445
Score = 48.1 bits (113), Expect = 1e-05
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 37/273 (13%)
Query: 60 PAGTPAPPPQQQP---GEPAAGPPAGWGEPPPPAAR--------ASWPETEPQPERSSVS 108
P G P P + P G +A P + P R A EP
Sbjct: 1170 PRGRPRIRPLEVPTTAGPASASTPTDGAKKPRGRGRGRGRKAEEAGGTRLEPLKPLKIKL 1229
Query: 109 DAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSR--VEGP-RQAAAREAEGTAGGWGVF 165
P+ G+ + T GD G + ++ +++ +R +E ++ ++ E +G F
Sbjct: 1230 SVPKAGEGLG----TSSGDAISGTDHNSLDSSLTREKIEAKIKEVEEKQPEMKSGFMASF 1285
Query: 166 PEVSRAARRPCGCPLGGEDPP-GTPAATPRAACCCAPQPAEDEPPAPPAVC-PRKRCAAG 223
+ ++ +R G PP P + P + QP +PPA PAV P A G
Sbjct: 1286 LDFLKSGKRHPPLYQAGLTPPLSPPKSVPPSVPARGLQP---QPPATPAVPHPPPSGAFG 1342
Query: 224 VGGG---------PAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVANLISIFG 274
+GG GCP+P ++ +RNLE PS D++ + ++ IS
Sbjct: 1343 LGGALEAAESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESIS--- 1399
Query: 275 SSFSGLLRKSPGGGREEE--EGEESGPEAAEPG 305
S+ S L G ++ +G P AA PG
Sbjct: 1400 SAISALDDPPLAGPKDTSTPDGPPLAPAAAVPG 1432
Score = 41.6 bits (96), Expect = 0.001
Identities = 58/233 (24%), Positives = 79/233 (33%), Gaps = 43/233 (18%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAG----PPAGWGEPPPPAARA-------SWPETE-- 99
P LY AG +PP P PA G PPA P PP + A E+E
Sbjct: 1296 PPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGL 1355
Query: 100 ----PQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEA-DATEAAWSRVEGPRQAAARE 154
P P + + R + +P + V + + ++ +A S ++ P A ++
Sbjct: 1356 GLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKD 1415
Query: 155 AEGTAGGWGVFPEVSRAARRPCGCPLGG----------------EDPPGTPAATPRAACC 198
G P ++ AA P PL G E PP TP P
Sbjct: 1416 TSTPDG-----PPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQ-- 1468
Query: 199 CAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPS 251
PQP PP PA+ A P P P P P PP+
Sbjct: 1469 --PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPA 1519
Score = 36.6 bits (83), Expect = 0.031
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 13/65 (20%)
Query: 51 PCPGLYLAGPAGTPAPP-------------PQQQPGEPAAGPPAGWGEPPPPAARASWPE 97
P PGL A GTP PP P QP P PP P PP A P
Sbjct: 1435 PLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPS 1494
Query: 98 TEPQP 102
+ P P
Sbjct: 1495 SPPPP 1499
Score = 35.8 bits (81), Expect = 0.053
Identities = 38/143 (26%), Positives = 46/143 (32%), Gaps = 25/143 (17%)
Query: 51 PCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDA 110
P P L P P P P P PPA PPPP A+ P+ + +
Sbjct: 1478 PQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPED 1537
Query: 111 PRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPE--- 167
P + D P+ GE D E G +GG G+F E
Sbjct: 1538 PELPDTRPLHLAKKQETAAVCGETD------------------EEAGESGGEGIFRERDE 1579
Query: 168 -VSRAARRP---CGCPLGGEDPP 186
V RA P G E PP
Sbjct: 1580 FVIRAEDIPSLKLALQTGREPPP 1602
Score = 35.4 bits (80), Expect = 0.070
Identities = 43/164 (26%), Positives = 60/164 (36%), Gaps = 14/164 (8%)
Query: 64 PAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPE---RSSVSDAPRVGDEVPVA 120
P PP PG+ GPP G+ P A R+ P+ P +S+ + + +
Sbjct: 889 PLPPA---PGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERS 945
Query: 121 TVTGVGDVFQGGEA-DATEAAWSRVEGPRQAAAREAEGTAG--GWGVF--PEVSRAARRP 175
+ ++F GG A D +A EG +A A G +G + S A
Sbjct: 946 FFPTMEEMFGGGAADDYGKAGPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPET 1005
Query: 176 CGCPLGGEDPPGTPA---ATPRAACCCAPQPAEDEPPAPPAVCP 216
G L PP P+ A P P A PP PP P
Sbjct: 1006 PGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPP 1049
Score = 30.8 bits (68), Expect = 1.7
Identities = 40/157 (25%), Positives = 54/157 (34%), Gaps = 31/157 (19%)
Query: 58 AGPAGTPAPPPQQQPGE-------PAAGPPAGWGEPPPPAARASWPETEPQPERSSVS-- 108
A P PAPPP+ + E P P EPP P + E + E+ V+
Sbjct: 1691 APPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEKEKVTRG 1750
Query: 109 DAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSR-----VEGP---RQAAAREAEG--T 158
+ P G+ T G+ + +R E P R+ +EA G T
Sbjct: 1751 ERPLRGERATSGRQTRPERSLATGQPATSRLPKARPTKVKAEPPPKKRKKWLKEAGGNAT 1810
Query: 159 AGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRA 195
AGG P G E PG P+ RA
Sbjct: 1811 AGG------------GPPGSSSDSESSPGAPSEDERA 1835
Score = 30.0 bits (66), Expect = 2.9
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Query: 49 SDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPP--PPAARASWPETEP 100
S P P L P P+PPP P PAA P A E P P P+T P
Sbjct: 1495 SPPPPPLPPPPPPAMPSPPP---PPPPAAAPLAAPPEEPAAPSPEDPELPDTRP 1545
Score = 29.6 bits (65), Expect = 3.8
Identities = 46/209 (22%), Positives = 58/209 (27%), Gaps = 70/209 (33%)
Query: 57 LAGPAGTPAPPPQQQPGEPAAGPPAGWGEPP-----PPAARASWPETEPQPERSSVSDAP 111
LA A P PPP PG P+A G EPP PP P +PQP P
Sbjct: 1424 LAPAAAVPGPPPL--PGLPSANSN-GTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQP 1480
Query: 112 RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRA 171
+ P+ V+
Sbjct: 1481 ALPSPPPL------------------------------------------------VAPT 1492
Query: 172 ARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGC 231
P PL PP P+ P AP A E PA P+ P
Sbjct: 1493 PSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPS--------------PEDP 1538
Query: 232 PAPGSTPLKKPRRNLEQPPSGGEDDDAEE 260
P + PL ++ G D++A E
Sbjct: 1539 ELPDTRPLHLAKKQETAAVCGETDEEAGE 1567
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 54 GLYLAGP--AGTPAPPPQQQPGEPAAGPPAGWGEP 86
GL +GP A P PPP P PA+ P G P
Sbjct: 1028 GLIQSGPHQAAPPPPPPPPPPPAPASEPKGGLTSP 1062
Score = 28.9 bits (63), Expect = 6.5
Identities = 32/125 (25%), Positives = 38/125 (30%), Gaps = 32/125 (25%)
Query: 185 PPGTPAATPRAACCCA----PQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK 240
PP A PR P A+ PP PPA + + G GS P
Sbjct: 275 PPPPERALPRQDTVIKHYQRPASAQPPPPPPPAHALQHYLSCG-----------GSYPSM 323
Query: 241 KPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPE 300
R NL P GG + E + P G G +GPE
Sbjct: 324 GHRANLACSPLGGGEPSPGAGEPS-----------------KAGPSGATAGASGRATGPE 366
Query: 301 AAEPG 305
AA G
Sbjct: 367 AAGGG 371
Score = 28.5 bits (62), Expect = 8.5
Identities = 44/175 (25%), Positives = 62/175 (35%), Gaps = 38/175 (21%)
Query: 66 PPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDE--VPVATVT 123
P P ++ G+ AG PPP A A P+ E PE+++ P E +P
Sbjct: 1671 PVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPE-TPEKTTSEKPPEQTPETAMPEPPAP 1729
Query: 124 GVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGE 183
+ + E + + +R E P + E G PE S A +P L
Sbjct: 1730 EKPSLLRPVEKEKEKEKVTRGERPLR-----GERATSGRQTRPERSLATGQPATSRL--- 1781
Query: 184 DPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCA--------AGVGGGPAG 230
P+A P + EPP P+KR A GGGP G
Sbjct: 1782 ---------PKA----RPTKVKAEPP------PKKRKKWLKEAGGNATAGGGPPG 1817
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 48.5 bits (114), Expect = 8e-06
Identities = 48/170 (28%), Positives = 58/170 (34%), Gaps = 32/170 (18%)
Query: 58 AGPAGTPAPPPQ------QQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAP 111
A PA P PPP + PG PA GPP PPPAA + P + AP
Sbjct: 264 AAPAAAPPPPPPAPATLARPPGHPA-GPPTAAPAVPPPAAAQNGGSAGAAP-----APAP 317
Query: 112 RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQA-----------AAREAEGTAG 160
G V+ G G A A A + E P++ AA TA
Sbjct: 318 AAGGPAGVSGQPG------PGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAA 371
Query: 161 GWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPA 210
+ P + A P P PGTP P+ A Q P A
Sbjct: 372 SMVIGPTMQGALPSPAAVP---PPAPGTPTGLPKGAAGAVTQSLSRTPTA 418
Score = 47.0 bits (110), Expect = 2e-05
Identities = 54/199 (27%), Positives = 66/199 (33%), Gaps = 22/199 (11%)
Query: 64 PAPPPQQQPGEPAA-GPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATV 122
P PP ++P PA PPA PPP + S P P ++V+ P P
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGS---CAPVPAAAAVAAGPEPAPAGPAKPA 161
Query: 123 TGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVF--------PEVSRAARR 174
+ G GP + A A T G P VS
Sbjct: 162 GPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNG 221
Query: 175 PCG-CPLGGEDPPGTPAATPR-AACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCP 232
P PL PGT TP P PA PPA PA AA P P
Sbjct: 222 PAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAP------AAPAAAPPPPPP 275
Query: 233 APGSTPLKKPRRNLEQPPS 251
AP + L +P + PP+
Sbjct: 276 APAT--LARPPGHPAGPPT 292
Score = 45.4 bits (106), Expect = 7e-05
Identities = 60/231 (25%), Positives = 67/231 (29%), Gaps = 74/231 (32%)
Query: 60 PAGTPAPPPQ----------QQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSD 109
P P PPP Q+PG P+ P P PPAA+ P PE S+ S
Sbjct: 83 PGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL-----RPPPEGSAGSC 137
Query: 110 APRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWG------ 163
AP VP A G + A ++ GP AAR G G G
Sbjct: 138 AP-----VPAAAAVAAGP-------EPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPG 185
Query: 164 -------------------------VFPEVSRAARRPCGC-PLGGEDPPGTPAATPRAAC 197
P VS P PL PGT TP
Sbjct: 186 PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG 245
Query: 198 CCAPQ---------------PAEDEPPAPPAVCPRKRCAAGVGGGPAGCPA 233
AP PA PP PPA R G P PA
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296
Score = 45.4 bits (106), Expect = 7e-05
Identities = 60/207 (28%), Positives = 70/207 (33%), Gaps = 27/207 (13%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETE--PQPERSSVSDAPRVGD 115
AGP P P P PG G PAG G A+ + P S V++ P
Sbjct: 170 AGPGPGPGPGPGPGPGP---GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALL 226
Query: 116 EVPVATVTGV---GDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAA 172
+P G F G A AA S P AA A P
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP------PPAPATL 280
Query: 173 RRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGP---- 228
RP G P G P PA P AA PAP A P AGV G P
Sbjct: 281 ARPPGHPAG--PPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP-----AGVSGQPGPGA 333
Query: 229 -AGCPAPGSTPLKKPRRNLEQPPSGGE 254
A PAPG + P+R ++ P +
Sbjct: 334 AAAAPAPG-VKAESPKRVVQAAPPAAQ 359
Score = 43.9 bits (102), Expect = 2e-04
Identities = 48/173 (27%), Positives = 55/173 (31%), Gaps = 19/173 (10%)
Query: 59 GPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVP 118
G A PAP P PA PA PPPPA P T +P + P VP
Sbjct: 245 GAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPA-----PATLARPP-GHPAGPPTAAPAVP 298
Query: 119 VATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTA------GGWGVFPEVSRAA 172
GG A A A GP + + G A G P+ A
Sbjct: 299 PPAAAQ-----NGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA 353
Query: 173 RRPCGCPLGGEDPPGTPAATPRAACC--CAPQPAEDEPPAPPAVCPRKRCAAG 223
P L P T A+ P PA PPAP + AAG
Sbjct: 354 APPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAG 406
Score = 36.2 bits (82), Expect = 0.041
Identities = 55/161 (34%), Positives = 58/161 (36%), Gaps = 46/161 (28%)
Query: 110 APRVGDEVPVATVTGVGD-VFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEV 168
APR EV A +G+ V G A A A GP A AEG G P
Sbjct: 44 APRT-PEVRAAAAGALGNHVVSGSPAGAAGA------GP----AAPAEGAPGAAPEPPPA 92
Query: 169 SRAARRPCGCPLGGEDPPGTPA----------ATPRA---------ACCCAPQPAE---- 205
RA RP G GG PG P+ A P A A CAP PA
Sbjct: 93 GRA--RPGG---GGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVA 147
Query: 206 --DEP----PAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK 240
EP PA PA AG G GP P PG P K
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGK 188
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 48.1 bits (113), Expect = 1e-05
Identities = 63/232 (27%), Positives = 79/232 (34%), Gaps = 32/232 (13%)
Query: 52 CPGLYLAGPAGTPAPPPQQQPGEPAAGP-PAGWGEPPPPAARAS---WPETE--PQPERS 105
C A P P PPPQ P P PA P P RAS W T+ P +
Sbjct: 896 CCSAEAAPPPAKPPPPPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGA 955
Query: 106 SVSDA--PRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWG 163
++D G P G+G+ A A R P AA+ + +
Sbjct: 956 GLADGFHRYYGPIEPQGLGLGLGEA-----RAAPRGAAGRPLSP--PAAQPPQKPPPSYF 1008
Query: 164 VFPEVSRAARRPCGCPLGGEDPPGTPAATPRAA--CCCAPQPAEDEPPAP---------- 211
A P G G PP PAA A C ++ PPAP
Sbjct: 1009 AIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPES 1068
Query: 212 -PAVCPRKRCAAGVGGGPAGCPAP----GSTPLKKPRRNLEQPPSGGEDDDA 258
P + P A G GG G PA + P P +LE PS ED ++
Sbjct: 1069 QPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAPPPCPYLDLEPSPSDSEDSES 1120
Score = 30.4 bits (67), Expect = 2.2
Identities = 42/155 (27%), Positives = 47/155 (30%), Gaps = 30/155 (19%)
Query: 67 PPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATVTGVG 126
PP + G GW PPPP A P P R + PR P A
Sbjct: 1190 PPPRHLSCSHDGLDGGWWAPPPPPWAAG-----PLPRRRARCGCPRSHPHRPRA------ 1238
Query: 127 DVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFP--EVSRAARRPCGCPLGGED 184
+ T AA P R A AGGW + P SR+ CP
Sbjct: 1239 -------SHRTPAA----AAPHHHRHRRA---AGGWDLPPPAPTSRSLEDLSSCPRAA-- 1282
Query: 185 PPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKR 219
P P P A PP P A R R
Sbjct: 1283 -PARRLTGPSRHARRCPHAAHWGPPLPTASHRRHR 1316
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 47.8 bits (112), Expect = 1e-05
Identities = 51/191 (26%), Positives = 69/191 (36%), Gaps = 24/191 (12%)
Query: 70 QQPGEPAAGPPAGWGEPPPPAARASWPETEPQ---PERSSVSDAPRVGDEVPVATVTGVG 126
++ G P P EP P+ + + E+ DA +E P A
Sbjct: 32 EEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKA------ 85
Query: 127 DVFQGGEADATEAAWSRVEGPRQAAARE--AEGTAGGWGVFPEVSRAARRPC--GCPLGG 182
E + TE A P +A +E A G A G G P+ + AA P P G
Sbjct: 86 ------EPEKTEGAAEAKAEPPKAPEQEQAAPGPAAG-GEAPKAAEAAAAPAESAAPAAG 138
Query: 183 EDPP---GTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTP- 238
E+P G P T A A + D PA + A PA AP STP
Sbjct: 139 EEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPK 198
Query: 239 LKKPRRNLEQP 249
+ P + E+P
Sbjct: 199 AQGPAASAEEP 209
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/148 (31%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 59 GPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVP 118
G A A PP+ E AA PA GE P A A+ P + S AP G+E
Sbjct: 92 GAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAP---------AESAAPAAGEEPS 142
Query: 119 VATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGT-AGGWGVFPEVSRAARRPCG 177
+ GE TEA P AA+E + A P S AA
Sbjct: 143 K----------EEGEPKKTEA-------PAAPAAQETKSDGAPASDSKPGSSEAAPSSKE 185
Query: 178 CPLGGEDPPGTPAATPRAACCCAPQPAE 205
P E P TP A AA P+P E
Sbjct: 186 TPAATEAPSSTPKAQGPAASAEEPKPVE 213
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.8 bits (112), Expect = 1e-05
Identities = 67/234 (28%), Positives = 82/234 (35%), Gaps = 41/234 (17%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAAR------ASWPETEPQ--PER 104
PGL P G+P PPP P AG P A R A+ PE+ P+ P R
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTR 81
Query: 105 S---------SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE- 154
S S A G+ P A T G V G A T + + +A E
Sbjct: 82 SAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141
Query: 155 -AEGTAGGWGVFPEVSRAARRPCGCPLGGEDPP---------GTPAATPRAACCCAPQP- 203
A G A +S ARR P G P GT PR A P+P
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201
Query: 204 ----------AEDEPPAPPAVCPRKRCAAGVG-GGPAGCPAPGS-TPLKKPRRN 245
A + P+ R+R +AG G PA S TPL P R+
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Score = 39.3 bits (90), Expect = 0.005
Identities = 47/202 (23%), Positives = 68/202 (33%), Gaps = 21/202 (10%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPER-SSVSDAP 111
P A P P PP P P+A PP + PPP A +P P+ +++ P
Sbjct: 471 PPSLAAPPLQVPPSPPASPPMSPSATPPP---QAPPPLAAPPLQLAKPPPQAPPALATPP 527
Query: 112 RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRA 171
P A+ G + A + P AA + P S
Sbjct: 528 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS-----PPASPT 582
Query: 172 ARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGC 231
+ P P G P T + PR AP PP PP+ P ++ + G
Sbjct: 583 LQAPRRPPTPG---PDTSVSGPRLTLALAP-----GPPPPPSRSP----SSTLSGPDLAG 630
Query: 232 PAPGSTPLKKPRRNLEQPPSGG 253
+ +T + R + P GG
Sbjct: 631 HSSSATSTPEELRGYDSGPEGG 652
Score = 35.8 bits (81), Expect = 0.053
Identities = 57/223 (25%), Positives = 67/223 (30%), Gaps = 44/223 (19%)
Query: 57 LAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASW-------PETEPQPERSSVSD 109
L P P PP Q P P A PP PP A S P + P S S
Sbjct: 436 LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 495
Query: 110 APRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFP--- 166
P P+A A + A + P A + FP
Sbjct: 496 TPPPQAPPPLA-------------APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 542
Query: 167 EVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPA----VCPRKRCAA 222
S +A P PL PP P A P A P PP+PPA PR+
Sbjct: 543 PFSPSASLPMS-PLA--TPP--PQAPPVLAA-----PLLQVPPSPPASPTLQAPRRPPTP 592
Query: 223 GVGGGPAG-------CPAPGSTPLKKPRRNLEQPPSGGEDDDA 258
G +G P P P + P L P G A
Sbjct: 593 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSA 635
Score = 34.3 bits (77), Expect = 0.16
Identities = 42/149 (28%), Positives = 49/149 (32%), Gaps = 41/149 (27%)
Query: 56 YLAGPAGTPA--PPPQQQPGEPAAGPPAGW--GEPPP------PAARASWPETEPQPERS 105
Y +GP G A PPP E AA PA W G PP P A WP
Sbjct: 645 YDSGPEGGAAASPPPD---AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSAD 701
Query: 106 SV-----SDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE------ 154
+ ++ P P A G GG+A A A + P+QA E
Sbjct: 702 GLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGAL 761
Query: 155 -----------------AEGTAGGWGVFP 166
AEG AGG G P
Sbjct: 762 QASVVQHLLSRTLLLAAAEGAAGGSGGGP 790
Score = 32.0 bits (71), Expect = 0.77
Identities = 52/198 (26%), Positives = 67/198 (33%), Gaps = 21/198 (10%)
Query: 56 YLAGPAGTP-APPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVG 114
+L P +P A PP Q P PA P P PPA+ P P P+ AP
Sbjct: 380 FLPSPPLSPLATPPPQAP--PALALPPLQAPPSPPASPPLSPLATPSPQ------APN-- 429
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARR 174
V + F + +A +S P + + A P +
Sbjct: 430 ----ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 485
Query: 175 PCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCP-- 232
P P+ P A P AA Q A+ P APPA+ A + PA P
Sbjct: 486 PASPPMSPSATPPPQAPPPLAA--PPLQLAKPPPQAPPALATPPLQA--LPSPPASFPGQ 541
Query: 233 APGSTPLKKPRRNLEQPP 250
AP S P L PP
Sbjct: 542 APFSPSASLPMSPLATPP 559
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 47.8 bits (112), Expect = 1e-05
Identities = 67/234 (28%), Positives = 82/234 (35%), Gaps = 41/234 (17%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAAR------ASWPETEPQ--PER 104
PGL P G+P PPP P AG P A R A+ PE+ P+ P R
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTR 81
Query: 105 S---------SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE- 154
S S A G+ P A T G V G A T + + +A E
Sbjct: 82 SAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141
Query: 155 -AEGTAGGWGVFPEVSRAARRPCGCPLGGEDPP---------GTPAATPRAACCCAPQP- 203
A G A +S ARR P G P GT PR A P+P
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201
Query: 204 ----------AEDEPPAPPAVCPRKRCAAGVG-GGPAGCPAPGS-TPLKKPRRN 245
A + P+ R+R +AG G PA S TPL P R+
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Score = 37.4 bits (85), Expect = 0.018
Identities = 54/195 (27%), Positives = 66/195 (33%), Gaps = 20/195 (10%)
Query: 64 PAPPPQQQPGEPAAGP----PAGWGEPPP--PAARASWP-ETEPQPERSSVSDAPRVGDE 116
PAP P Q P P P P+ PPP P A AS P + P P S ++ P
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP----- 618
Query: 117 VPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPC 176
P A Q + S + P A P S + P
Sbjct: 619 -PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 677
Query: 177 GCPLGGEDPPGTPAATPRA-ACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPG 235
P PP +P+ATP + A P PP+PPA P A P AP
Sbjct: 678 SPP---ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP- 733
Query: 236 STPLKKPRRNLEQPP 250
PL+ P PP
Sbjct: 734 --PLQVPPSPPASPP 746
Score = 36.6 bits (83), Expect = 0.031
Identities = 57/229 (24%), Positives = 74/229 (32%), Gaps = 38/229 (16%)
Query: 51 PCPGLYLAGPAGTPAP--------PPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQP 102
PCP P TP P PP Q P PA P G P PP + + P + P
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAP--PALASPPLQGLPSPPLSPLATPPPQAPP 623
Query: 103 ERS-----SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEG 157
+ + P P+AT + Q A A + P +
Sbjct: 624 XLALPPLQAPPSPPASPPLSPLATPSP-----QAPNALAVHLLQAPFSPPPSPPVQAPFS 678
Query: 158 TAGGWGVFPEVSRAARRP---CGCPLGGEDPPGTPAATPRAACCCAP--------QPAED 206
V P + ++ P PL + PP PA+ P + P P
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPL--QVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 207 EPPAPPAVCPRKRCAAGVGGGP---AGCP--APGSTPLKKPRRNLEQPP 250
PP+PPA P A P A P P S P P L +PP
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPP 785
Score = 35.4 bits (80), Expect = 0.070
Identities = 50/210 (23%), Positives = 65/210 (30%), Gaps = 26/210 (12%)
Query: 58 AGPAGTPA--PPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGD 115
A P +P+ PPPQ P P A PP P PPA+ P P P + AP +
Sbjct: 712 ASPPMSPSATPPPQAPP--PLAAPPL-QVPPSPPASPPMSPSATPPPRVPPLLAAPPL-- 766
Query: 116 EVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRP 175
+VP + + A A + P A + G F + P
Sbjct: 767 QVPPSPPASLP---MSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 823
Query: 176 CGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAG----- 230
P PP P P P P +P PR+ G +G
Sbjct: 824 LATP-----PPQAPPVLAAPLLQVPPSP----PASPTLQAPRRPPTPGPDTSVSGPRLTL 874
Query: 231 --CPAPGSTPLKKPRRNLEQPPSGGEDDDA 258
P P P + P L P G A
Sbjct: 875 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSA 904
Score = 34.3 bits (77), Expect = 0.16
Identities = 42/149 (28%), Positives = 49/149 (32%), Gaps = 41/149 (27%)
Query: 56 YLAGPAGTPA--PPPQQQPGEPAAGPPAGW--GEPPP------PAARASWPETEPQPERS 105
Y +GP G A PPP E AA PA W G PP P A WP
Sbjct: 914 YDSGPEGGAAASPPPD---AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSAD 970
Query: 106 SV-----SDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAARE------ 154
+ ++ P P A G GG+A A A + P+QA E
Sbjct: 971 GLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGAL 1030
Query: 155 -----------------AEGTAGGWGVFP 166
AEG AGG G P
Sbjct: 1031 QASVVQHLLSRTLLLAAAEGAAGGSGGGP 1059
Score = 33.5 bits (75), Expect = 0.26
Identities = 64/253 (25%), Positives = 84/253 (33%), Gaps = 37/253 (14%)
Query: 57 LAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQ--PERSSVSDAPRVG 114
L P P P P P G PPPP+ S + P SS + P
Sbjct: 852 LQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPE-- 909
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARR 174
+ G +GG AA S AA A W P A R
Sbjct: 910 ------ELRGYDSGPEGG------AAASPPPDAELAACHPA-----AWSRGPAPPLAFRG 952
Query: 175 PCGCPLGGEDPPGTPAATPRAACCC-APQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPA 233
G PL PP T + C + E PAP A+ P + G GG A A
Sbjct: 953 APGAPLPW--PPATGPGSADGLCTIYETEGPESATPAPGALDPGP--SPGTSGGKAAAGA 1008
Query: 234 PGSTPLKKPRR-NLEQPPSGGEDDDAEEMETGNVANLIS--IFGSSFSGLLRKSPGG-GR 289
+ P++ L + P G ++ V +L+S + ++ G S GG G
Sbjct: 1009 GAGASSRSPKQARLGELPLGA-------LQASVVQHLLSRTLLLAAAEGAAGGSGGGPGG 1061
Query: 290 EEEEGEESGPEAA 302
E G G AA
Sbjct: 1062 AEGGGVTGGARAA 1074
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 53 PGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWP-ETEPQPERSSVSDAP 111
P L A P P PP P P A PP P P A A+ P + P P S AP
Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPP-----PQAPPALATPPLQALPSPPASFPGQAP 812
Score = 30.0 bits (66), Expect = 2.9
Identities = 43/159 (27%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 84 GEPPPPAARASWPE-TEPQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWS 142
G P P AR S TE R + S PR E P +V+ + + A S
Sbjct: 170 GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPS 229
Query: 143 RVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQ 202
G ++ A+R +A +S AR G GTP A + P+
Sbjct: 230 AGGGLQRPASRSLSSSA------TPLSSPAR-------SGPSARGTPRAPAHPS---QPK 273
Query: 203 PAEDEPPAPPAVCP-RKRCAAGVG---GGPAGCPAPGST 237
P + PP V P RK A +G P P+P T
Sbjct: 274 PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGT 312
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 47.8 bits (112), Expect = 1e-05
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 44 RQVYLSDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWG--EPPPPAAR-----ASWP 96
R + LS P L G +G PPP ++P P PP G PPPP +R + P
Sbjct: 337 RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP 396
Query: 97 ETEPQPERSSVSDAPRVGDEVPV 119
T P RS V D+PR G P+
Sbjct: 397 ATPQLPSRSGV-DSPRSGPRPPL 418
Score = 35.4 bits (80), Expect = 0.070
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 7/153 (4%)
Query: 64 PAPPPQQ-QPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATV 122
P PPPQ +P P+ P+ + PPP S P P P SS +D + ++
Sbjct: 283 PPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLS 342
Query: 123 TGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGG 182
+ + G + S P R+ G +G P VSR P
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERPPP---PVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 183 EDPPGTPAATPRAA---CCCAPQPAEDEPPAPP 212
+ P + +PR+ +P+ PP PP
Sbjct: 400 QLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 34.3 bits (77), Expect = 0.16
Identities = 54/227 (23%), Positives = 75/227 (33%), Gaps = 48/227 (21%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSS---VSDAPRVG 114
+GP P P P + G P P PPP S P++ P P S+ + +P
Sbjct: 145 SGPGRFPVPSPGHRSGPPE---PQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNR 201
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEV-----S 169
PV GG + GP GTA G G + S
Sbjct: 202 GSPPVP----------GGPRQPSP-------GPTPPPFPGNRGTALGGGSIRQSPLSSSS 244
Query: 170 RAARRPCGCP-----LGGEDPPGTPAATPRAA----CCCAPQPAEDEPPAPPAVCPRKRC 220
+ RP P L + PP P R + P P ++PP P PR
Sbjct: 245 PFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST--PRPSA 302
Query: 221 AAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVA 267
++ P PG PL PPS +D+ + N++
Sbjct: 303 SSQAPPPPPPPSRPGPPPL---------PPSSSGNDETPRLPQRNLS 340
Score = 31.6 bits (70), Expect = 1.0
Identities = 48/188 (25%), Positives = 59/188 (31%), Gaps = 51/188 (27%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGE-----------------PPPPAARASWPETEP 100
A P PPP +PG P PP+ G PP P+ S P P
Sbjct: 302 ASSQAPPPPPPPSRPGPPPL-PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPP 360
Query: 101 QPER--SSVSDAP-RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEG 157
ER V D P R G P V+ G + A + S V+ PR
Sbjct: 361 PSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS-------- 412
Query: 158 TAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAP-----------QPAED 206
G P + P P G PP P+ + R +P P D
Sbjct: 413 -----GPRPPL------PPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISD 461
Query: 207 EPPAPPAV 214
PP P V
Sbjct: 462 LPPPEPYV 469
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 47.8 bits (112), Expect = 1e-05
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 44 RQVYLSDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWG--EPPPPAAR-----ASWP 96
R + LS P L G +G PPP ++P P PP G PPPP +R + P
Sbjct: 337 RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP 396
Query: 97 ETEPQPERSSVSDAPRVGDEVPV 119
T P RS V D+PR G P+
Sbjct: 397 ATPQLPSRSGV-DSPRSGPRPPL 418
Score = 35.4 bits (80), Expect = 0.070
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 7/153 (4%)
Query: 64 PAPPPQQ-QPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATV 122
P PPPQ +P P+ P+ + PPP S P P P SS +D + ++
Sbjct: 283 PPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLS 342
Query: 123 TGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGG 182
+ + G + S P R+ G +G P VSR P
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERPPP---PVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 183 EDPPGTPAATPRAA---CCCAPQPAEDEPPAPP 212
+ P + +PR+ +P+ PP PP
Sbjct: 400 QLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 34.3 bits (77), Expect = 0.16
Identities = 54/227 (23%), Positives = 75/227 (33%), Gaps = 48/227 (21%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSS---VSDAPRVG 114
+GP P P P + G P P PPP S P++ P P S+ + +P
Sbjct: 145 SGPGRFPVPSPGHRSGPPE---PQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNR 201
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEV-----S 169
PV GG + GP GTA G G + S
Sbjct: 202 GSPPVP----------GGPRQPSP-------GPTPPPFPGNRGTALGGGSIRQSPLSSSS 244
Query: 170 RAARRPCGCP-----LGGEDPPGTPAATPRAA----CCCAPQPAEDEPPAPPAVCPRKRC 220
+ RP P L + PP P R + P P ++PP P PR
Sbjct: 245 PFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST--PRPSA 302
Query: 221 AAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVA 267
++ P PG PL PPS +D+ + N++
Sbjct: 303 SSQAPPPPPPPSRPGPPPL---------PPSSSGNDETPRLPQRNLS 340
Score = 31.6 bits (70), Expect = 1.0
Identities = 48/188 (25%), Positives = 59/188 (31%), Gaps = 51/188 (27%)
Query: 58 AGPAGTPAPPPQQQPGEPAAGPPAGWGE-----------------PPPPAARASWPETEP 100
A P PPP +PG P PP+ G PP P+ S P P
Sbjct: 302 ASSQAPPPPPPPSRPGPPPL-PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPP 360
Query: 101 QPER--SSVSDAP-RVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEG 157
ER V D P R G P V+ G + A + S V+ PR
Sbjct: 361 PSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS-------- 412
Query: 158 TAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAP-----------QPAED 206
G P + P P G PP P+ + R +P P D
Sbjct: 413 -----GPRPPL------PPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISD 461
Query: 207 EPPAPPAV 214
PP P V
Sbjct: 462 LPPPEPYV 469
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 47.8 bits (112), Expect = 1e-05
Identities = 69/228 (30%), Positives = 81/228 (35%), Gaps = 39/228 (17%)
Query: 53 PGLYLAGPAGT------PA-PPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPER- 104
PG+ G T PA PP Q PA P GEP A + E E PE
Sbjct: 2171 PGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEER 2230
Query: 105 ------SSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAA-WSRVEGPRQAAAREAEG 157
SSV AP ++ P+ G GD QG EA+ AA +GP +A+
Sbjct: 2231 ARGDPDSSVEPAPVPPEQRPL----GSGD--QGAEAEGPPAASLCAPDGPAPNTVAQAQA 2284
Query: 158 TAG-GWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAP----- 211
G G E SRAA E PPG P AA P+P + P AP
Sbjct: 2285 ADGAGPEDDTEASRAA-------APAEGPPG--GIQPEAA---EPKPTAEAPKAPRVEEI 2332
Query: 212 PAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAE 259
P R R G P P G EDDDA+
Sbjct: 2333 PQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDDDAQ 2380
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 48 LSDPCPGLYLAGPAGTPAPP-PQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSS 106
LS P PG + P P PP P QPG+P++ P + P P+ + P PQP +S
Sbjct: 433 LSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSP 492
Query: 107 VS 108
V+
Sbjct: 493 VT 494
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 48 LSDPCPGLYLAGPAGTPAPP-PQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSS 106
LS P PG + P P PP P QPG+P++ P + P P+ + P PQP +S
Sbjct: 393 LSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSP 452
Query: 107 VS 108
V+
Sbjct: 453 VT 454
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 47.4 bits (111), Expect = 2e-05
Identities = 60/228 (26%), Positives = 77/228 (33%), Gaps = 50/228 (21%)
Query: 51 PCPGLYLAG------PAGTPA---PPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQ 101
P PG G PAG PA PPPQ P +P GP + PP R PQ
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQR---QGPPLQQR-----PPPQ 488
Query: 102 PERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGG 161
++ P G +P + A + S+ P Q R++ AGG
Sbjct: 489 GQQHLSGLGPPAGSPLPQRLPS---------PTSAPQQPASQAAPPTQGQGRQSRPVAGG 539
Query: 162 WG----VFPEVSRAARRPCGCP-------LGGEDPPGTPAATPRAACCCAPQPAEDEPPA 210
G P S + +R G P + G PP A P Q + P
Sbjct: 540 PGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPP------GGQQRQGPPQK 593
Query: 211 PPAVCPRKRCAAGVGGGPAGCP-------APGSTPLKKPRRNLEQPPS 251
PP R A+ G P P G P +P+ L Q PS
Sbjct: 594 PPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPS 641
Score = 47.0 bits (110), Expect = 2e-05
Identities = 53/202 (26%), Positives = 70/202 (34%), Gaps = 27/202 (13%)
Query: 51 PCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEP---PPPAARASWPETEPQPERSSV 107
P PG GP PPPQ Q GPPAG P P P + P ++ P
Sbjct: 470 PGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQ 529
Query: 108 SDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPE 167
R PVA G + + + + R GP QA + +
Sbjct: 530 GRQSR-----PVAGGPGAPPAARPPASPSPQ----RQAGPPQATRQTSVS---------- 570
Query: 168 VSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGG 227
A + G P GG+ G P P A + A P P P + G G
Sbjct: 571 -GPAPPKASGAPPGGQQRQGPPQKPPGPA--GPTRQASQAGPVPRTGPPTTQQPRPSGPG 627
Query: 228 PAGCPAPGSTPLKKPRRNLEQP 249
PAG P P +KP +++ P
Sbjct: 628 PAGRPKPQLA--QKPSQDVPPP 647
Score = 34.7 bits (78), Expect = 0.12
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 59 GPAGTPAPPPQQQPGEPAAGP-PAGWGEPPPPAARASWPET------EPQPERSSVSDAP 111
GPAG P P Q+P + P A G PP P S T EP P R S+S
Sbjct: 627 GPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEPAPPRPSLSQ-- 684
Query: 112 RVGDEVPVATVTGVGDVF 129
DEV T+ + F
Sbjct: 685 ---DEVKAETIRSLRKSF 699
Score = 33.1 bits (74), Expect = 0.35
Identities = 57/252 (22%), Positives = 78/252 (30%), Gaps = 61/252 (24%)
Query: 32 KNLLVSLVLRSARQVY----LSDPCPGLYLAGPAGTP-APPPQQQPGEPAAGPPAGWGEP 86
K L+V LV+ Q D PG G +P A P +Q + AGPPA +
Sbjct: 403 KQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQ--QR 460
Query: 87 PPPAARASWPETEPQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEG 146
PPP + P+ P P+R +G
Sbjct: 461 PPP--QGGPPQPGPGPQR----------------------------------------QG 478
Query: 147 PRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAED 206
P +G G+ P + P P + AA P +P
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAG 538
Query: 207 EPPAPPA----VCPRKRCAAGVG--------GGPAGCPAPGSTPLKKPRRNLEQPPSGGE 254
P APPA P + AG GPA A G+ P + R+ Q P G
Sbjct: 539 GPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPA 598
Query: 255 DDDAEEMETGNV 266
+ + G V
Sbjct: 599 GPTRQASQAGPV 610
Score = 28.9 bits (63), Expect = 6.5
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
Query: 41 RSARQVYLSDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARA-----SW 95
++ RQ +S P P P + APP QQ P PP G P A++A +
Sbjct: 562 QATRQTSVSGPAP------PKASGAPPGGQQRQGPPQKPPGPAG-PTRQASQAGPVPRTG 614
Query: 96 PETEPQPERSSVSDAPR 112
P T QP S A R
Sbjct: 615 PPTTQQPRPSGPGPAGR 631
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 47.4 bits (111), Expect = 2e-05
Identities = 60/228 (26%), Positives = 77/228 (33%), Gaps = 50/228 (21%)
Query: 51 PCPGLYLAG------PAGTPA---PPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQ 101
P PG G PAG PA PPPQ P +P GP + PP R PQ
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQR---QGPPLQQR-----PPPQ 488
Query: 102 PERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGG 161
++ P G +P + A + S+ P Q R++ AGG
Sbjct: 489 GQQHLSGLGPPAGSPLPQRLPS---------PTSAPQQPASQAAPPTQGQGRQSRPVAGG 539
Query: 162 WG----VFPEVSRAARRPCGCP-------LGGEDPPGTPAATPRAACCCAPQPAEDEPPA 210
G P S + +R G P + G PP A P Q + P
Sbjct: 540 PGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPP------GGQQRQGPPQK 593
Query: 211 PPAVCPRKRCAAGVGGGPAGCP-------APGSTPLKKPRRNLEQPPS 251
PP R A+ G P P G P +P+ L Q PS
Sbjct: 594 PPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPS 641
Score = 47.0 bits (110), Expect = 2e-05
Identities = 53/202 (26%), Positives = 70/202 (34%), Gaps = 27/202 (13%)
Query: 51 PCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEP---PPPAARASWPETEPQPERSSV 107
P PG GP PPPQ Q GPPAG P P P + P ++ P
Sbjct: 470 PGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQ 529
Query: 108 SDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPE 167
R PVA G + + + + R GP QA + +
Sbjct: 530 GRQSR-----PVAGGPGAPPAARPPASPSPQ----RQAGPPQATRQTSVS---------- 570
Query: 168 VSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGG 227
A + G P GG+ G P P A + A P P P + G G
Sbjct: 571 -GPAPPKASGAPPGGQQRQGPPQKPPGPA--GPTRQASQAGPVPRTGPPTTQQPRPSGPG 627
Query: 228 PAGCPAPGSTPLKKPRRNLEQP 249
PAG P P +KP +++ P
Sbjct: 628 PAGRPKPQLA--QKPSQDVPPP 647
Score = 33.1 bits (74), Expect = 0.35
Identities = 57/252 (22%), Positives = 78/252 (30%), Gaps = 61/252 (24%)
Query: 32 KNLLVSLVLRSARQVY----LSDPCPGLYLAGPAGTP-APPPQQQPGEPAAGPPAGWGEP 86
K L+V LV+ Q D PG G +P A P +Q + AGPPA +
Sbjct: 403 KQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQ--QR 460
Query: 87 PPPAARASWPETEPQPERSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEG 146
PPP + P+ P P+R +G
Sbjct: 461 PPP--QGGPPQPGPGPQR----------------------------------------QG 478
Query: 147 PRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAED 206
P +G G+ P + P P + AA P +P
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAG 538
Query: 207 EPPAPPA----VCPRKRCAAGVG--------GGPAGCPAPGSTPLKKPRRNLEQPPSGGE 254
P APPA P + AG GPA A G+ P + R+ Q P G
Sbjct: 539 GPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPA 598
Query: 255 DDDAEEMETGNV 266
+ + G V
Sbjct: 599 GPTRQASQAGPV 610
Score = 32.7 bits (73), Expect = 0.45
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 59 GPAGTPAPPPQQQPGEPAAGP-PAGWGEPPPPAARASWPETEP 100
GPAG P P Q+P + P A G PP P +AS + +P
Sbjct: 627 GPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
Score = 28.9 bits (63), Expect = 6.5
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
Query: 41 RSARQVYLSDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARA-----SW 95
++ RQ +S P P P + APP QQ P PP G P A++A +
Sbjct: 562 QATRQTSVSGPAP------PKASGAPPGGQQRQGPPQKPPGPAG-PTRQASQAGPVPRTG 614
Query: 96 PETEPQPERSSVSDAPR 112
P T QP S A R
Sbjct: 615 PPTTQQPRPSGPGPAGR 631
>gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo
sapiens]
Length = 633
Score = 46.6 bits (109), Expect = 3e-05
Identities = 60/205 (29%), Positives = 78/205 (38%), Gaps = 48/205 (23%)
Query: 54 GLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRV 113
G AG +G PPPQ QP +PAA PA +PPP R P +P+ ++++S +
Sbjct: 19 GTDAAGASGLQQPPPQPQP-QPAAAAPA---QPPPEPPRK--PRMDPRRRQAALSFLTNI 72
Query: 114 GDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAAR 173
+ G +A W G AA+ G A G + AA
Sbjct: 73 SLD---------------GRLPPQDAEWG--GGEEGGAAKPGAGGACGARTRFSLLAAAE 115
Query: 174 RPCGCPLGGEDPPGTPAATPRAAC-CCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCP 232
R L PGTPAA A C PQP+ P P GG A
Sbjct: 116 RGGCIALAA---PGTPAAGLAAGSGPCLPQPSSLPPLIP--------------GGHATVS 158
Query: 233 APG-----STPLKKPRRNLE--QPP 250
PG ++PL R + E QPP
Sbjct: 159 GPGVARGFASPLGAGRASGEQWQPP 183
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 46.6 bits (109), Expect = 3e-05
Identities = 87/334 (26%), Positives = 104/334 (31%), Gaps = 103/334 (30%)
Query: 50 DPCPGLYLAGPAGTPAPP------------------PQQQPGEPAAGPPAG--WG---EP 86
DP P P GT PP PQ P PA GPP G W
Sbjct: 641 DPSPPQERNLPEGTERPPKLCSSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLA 700
Query: 87 PPPAARASWPETEPQPERSSVS---DAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSR 143
PPA P P+P+R S S P GD
Sbjct: 701 GPPAT----PPDPPRPKRRSHSLSRPGPTEGD---------------------------- 728
Query: 144 VEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPA---ATPRAACCCA 200
A EAEG G + RRP L P TP TPR+
Sbjct: 729 -------AEGEAEGPVG--STLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRSQSFAL 779
Query: 201 PQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKK----PRRNLEQPPSG---- 252
+ PP PP KR ++ G P P S K+ PRR P+G
Sbjct: 780 RARRKGPPPPPP-----KRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEP 834
Query: 253 -------GEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPEAAE-- 303
G D EE E G S GSS GL G ++ + +GP E
Sbjct: 835 PGPPAPAGPASDTEEEEPGPEGTPPS-RGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETP 893
Query: 304 --PG--------QICCDKPVLRDMNPWSTAIVAF 327
PG +P R+ P TA++AF
Sbjct: 894 VPPGLDFNLTESDTVKRRPKCREREPLQTALLAF 927
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/72 (27%), Positives = 26/72 (36%)
Query: 67 PPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATVTGVG 126
P + P P P P PPA P T Q R +S GD V + VG
Sbjct: 270 PAARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGLSPDSPAGDRNSVGSEGSVG 329
Query: 127 DVFQGGEADATE 138
+ G ++E
Sbjct: 330 SIRSAGSGQSSE 341
Score = 30.0 bits (66), Expect = 2.9
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 19/118 (16%)
Query: 60 PAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPE-----TEPQPERSSVSD----- 109
PA P PP PG ++ GE PPAA A+ + T P+P + +
Sbjct: 975 PAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSG 1034
Query: 110 ---APRVGDE-VPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAA-----AREAEGT 158
APR+G VP G V G E S + +AA +E EGT
Sbjct: 1035 PKLAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQEGT 1092
Score = 28.9 bits (63), Expect = 6.5
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 23/166 (13%)
Query: 51 PCPGLYLAGPAGTPAPPPQQQP-GEPAAGPPAGWGEP--PPPAARASWPETEPQPERSSV 107
P P L P +PP P EP++ P G P P PA + P P P S
Sbjct: 934 PGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPC-PGPGLESS 992
Query: 108 SDAPRVGDEVPVAT------VTGVGDVFQGGEADATEAAWSRVE-----GPRQA--AARE 154
+ + G+ P A V G G + T+ A+S + GPR E
Sbjct: 993 AASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLGPRPVPPPRPE 1052
Query: 155 AEGTAGGWGVFPEVSR------AARRPCGCPLGGEDPPGTPAATPR 194
+ GT G + + AA R +G ++ GTP+A+ +
Sbjct: 1053 STGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQEGTPSASTK 1098
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 46.6 bits (109), Expect = 3e-05
Identities = 87/334 (26%), Positives = 104/334 (31%), Gaps = 103/334 (30%)
Query: 50 DPCPGLYLAGPAGTPAPP------------------PQQQPGEPAAGPPAG--WG---EP 86
DP P P GT PP PQ P PA GPP G W
Sbjct: 723 DPSPPQERNLPEGTERPPKLCSSLPGQGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLA 782
Query: 87 PPPAARASWPETEPQPERSSVS---DAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSR 143
PPA P P+P+R S S P GD
Sbjct: 783 GPPAT----PPDPPRPKRRSHSLSRPGPTEGD---------------------------- 810
Query: 144 VEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPA---ATPRAACCCA 200
A EAEG G + RRP L P TP TPR+
Sbjct: 811 -------AEGEAEGPVG--STLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRSQSFAL 861
Query: 201 PQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKK----PRRNLEQPPSG---- 252
+ PP PP KR ++ G P P S K+ PRR P+G
Sbjct: 862 RARRKGPPPPPP-----KRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEP 916
Query: 253 -------GEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPEAAE-- 303
G D EE E G S GSS GL G ++ + +GP E
Sbjct: 917 PGPPAPAGPASDTEEEEPGPEGTPPS-RGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETP 975
Query: 304 --PG--------QICCDKPVLRDMNPWSTAIVAF 327
PG +P R+ P TA++AF
Sbjct: 976 VPPGLDFNLTESDTVKRRPKCREREPLQTALLAF 1009
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/72 (27%), Positives = 26/72 (36%)
Query: 67 PPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVATVTGVG 126
P + P P P P PPA P T Q R +S GD V + VG
Sbjct: 352 PAARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGLSPDSPAGDRNSVGSEGSVG 411
Query: 127 DVFQGGEADATE 138
+ G ++E
Sbjct: 412 SIRSAGSGQSSE 423
Score = 30.0 bits (66), Expect = 2.9
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 19/118 (16%)
Query: 60 PAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPE-----TEPQPERSSVSD----- 109
PA P PP PG ++ GE PPAA A+ + T P+P + +
Sbjct: 1057 PAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSG 1116
Query: 110 ---APRVGDE-VPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAA-----AREAEGT 158
APR+G VP G V G E S + +AA +E EGT
Sbjct: 1117 PKLAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQEGT 1174
Score = 28.9 bits (63), Expect = 6.5
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 23/166 (13%)
Query: 51 PCPGLYLAGPAGTPAPPPQQQP-GEPAAGPPAGWGEP--PPPAARASWPETEPQPERSSV 107
P P L P +PP P EP++ P G P P PA + P P P S
Sbjct: 1016 PGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPC-PGPGLESS 1074
Query: 108 SDAPRVGDEVPVAT------VTGVGDVFQGGEADATEAAWSRVE-----GPRQA--AARE 154
+ + G+ P A V G G + T+ A+S + GPR E
Sbjct: 1075 AASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLGPRPVPPPRPE 1134
Query: 155 AEGTAGGWGVFPEVSR------AARRPCGCPLGGEDPPGTPAATPR 194
+ GT G + + AA R +G ++ GTP+A+ +
Sbjct: 1135 STGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQEGTPSASTK 1180
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 46.6 bits (109), Expect = 3e-05
Identities = 65/250 (26%), Positives = 87/250 (34%), Gaps = 52/250 (20%)
Query: 60 PAGTPAPPPQQQPGEPAAGPPAGWGEPPPP-----AARASWPETEPQPERSSVSDAPRVG 114
P G P PP Q +P PP G + PPP + A P +PQ + P+ G
Sbjct: 197 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ-G 255
Query: 115 DEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARR 174
P G QGG ++ +GP + GG SR++R
Sbjct: 256 PPPPPGKPQGPPP--QGG---------NKPQGPPPPGKPQGPPPQGG-----SKSRSSRS 299
Query: 175 PCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAP 234
P G P G PP P+ P P +P PP P+ G P G P P
Sbjct: 300 PPGKPQG---PPPQGGNQPQG-----PPPPPGKPQGPP---PQG------GNKPQGPPPP 342
Query: 235 GSTPLKKPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEG 294
G KP+ PP GG + G G++ G P GG +
Sbjct: 343 G-----KPQ---GPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQG--PPPPAGGNPQ--- 389
Query: 295 EESGPEAAEP 304
+ P A +P
Sbjct: 390 QPQAPPAGQP 399
Score = 45.4 bits (106), Expect = 7e-05
Identities = 64/269 (23%), Positives = 86/269 (31%), Gaps = 40/269 (14%)
Query: 60 PAGTPAPPPQQ----------QPGEPAAGPPAGWGEP--PPPAARASWPETEPQPERSSV 107
P G P PP Q PG+P PP G +P PPP + P P +
Sbjct: 53 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-----PPQGDK 107
Query: 108 SDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEG---TAGGWGV 164
S +PR P G+ QG + +GP + +G G
Sbjct: 108 SRSPRSPPGKPQGPPPQGGNQPQGPPPPP-----GKPQGPPPQGGNKPQGPPPPGKPQGP 162
Query: 165 FPE---VSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCA 221
P+ SR++R P G P G PP P+ P P +P PP K
Sbjct: 163 PPQGDNKSRSSRSPPGKPQG---PPPQGGNQPQ-----GPPPPPGKPQGPPPQGGNKPQG 214
Query: 222 AGVGGGPAGCPAPGSTPLKK----PRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSF 277
G P G P G + P + PP GG G G+
Sbjct: 215 PPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 274
Query: 278 SGLLRKSPGGGREEEEGEESGPEAAEPGQ 306
G G + G +S + PG+
Sbjct: 275 QGPPPPGKPQGPPPQGGSKSRSSRSPPGK 303
Score = 45.4 bits (106), Expect = 7e-05
Identities = 50/179 (27%), Positives = 65/179 (36%), Gaps = 28/179 (15%)
Query: 60 PAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEV-- 117
P G P PP Q +P PP G + PPP S + P P+ G++
Sbjct: 259 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG-GSKSRSSRSPPGKPQGPPPQGGNQPQG 317
Query: 118 -PVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPC 176
P G QGG ++ +GP + GG SR+AR P
Sbjct: 318 PPPPPGKPQGPPPQGG---------NKPQGPPPPGKPQGPPPQGG-----SKSRSARSPP 363
Query: 177 GCPLGGEDPPGTPAATPRAACCCAPQPA---EDEPPAPPAVCPRKRCAAGVGGGPAGCP 232
G P G PP P+ P PA +P APPA P+ GG P+ P
Sbjct: 364 GKPQG---PPQQEGNNPQG----PPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
Score = 38.9 bits (89), Expect = 0.006
Identities = 38/148 (25%), Positives = 53/148 (35%), Gaps = 23/148 (15%)
Query: 60 PAGTPAPPPQQ----------QPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSD 109
P G P PP Q PG+P PP G +P P P+ P +
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 338
Query: 110 APRVGDEVPVATVTGVGDVFQGG-EADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEV 168
P G G QGG ++ + + + +GP Q +G G P+
Sbjct: 339 PPPPGKP--------QGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQ 390
Query: 169 SRAARRPCGCPLGGEDPP--GTPAATPR 194
+A P G P G PP G P+ P+
Sbjct: 391 PQAP--PAGQPQGPPRPPQGGRPSRPPQ 416
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 46.2 bits (108), Expect = 4e-05
Identities = 53/204 (25%), Positives = 62/204 (30%), Gaps = 36/204 (17%)
Query: 46 VYLSDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERS 105
VY G+ P G PPP G+P PP G PP + P P P S
Sbjct: 460 VYRLHQGKGMMPPPPMGMMPPPPPPPSGQP---PPPPSGPLPPWQQQQQQPPPPPPPSSS 516
Query: 106 SVSDAPRVGDEVPVATVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVF 165
S P + T T G + W + +QAAA + G G
Sbjct: 517 MASSTPLPWQQNTTTTTTSAG--------TGSIPPWQQ----QQAAAAASPGAPQMQG-- 562
Query: 166 PEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQPAEDE-------PPAPPAVCPRK 218
P PL PPG P A P P PP PP
Sbjct: 563 --------NPTMVPL----PPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPS 610
Query: 219 RCAAGVGGGPAGCPAPGSTPLKKP 242
+G G AG P G P P
Sbjct: 611 NFVTMMGMGVAGMPPFGMPPAPPP 634
Score = 28.5 bits (62), Expect = 8.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
Query: 49 SDPCPGLYLAGPAGTPAPP---PQQQP-------GEPAA----GPPAGWGEPPPP 89
S P G++ GP G P P P G P GPP W +PPPP
Sbjct: 376 SRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP 430
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,168,076
Number of Sequences: 37866
Number of extensions: 1406566
Number of successful extensions: 19551
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 1313
Number of HSP's that attempted gapping in prelim test: 10234
Number of HSP's gapped (non-prelim): 7260
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.