Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 14249636

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14249636 TOX high mobility group box family member 2 isoform
c [Homo sapiens]
         (464 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|149408144 TOX high mobility group box family member 2 isoform...   936   0.0  
gi|149408141 TOX high mobility group box family member 2 isoform...   936   0.0  
gi|14249636 TOX high mobility group box family member 2 isoform ...   936   0.0  
gi|149408146 TOX high mobility group box family member 2 isoform...   872   0.0  
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...   369   e-102
gi|226246533 TOX high mobility group box family member 3 isoform...   280   2e-75
gi|226054295 TOX high mobility group box family member 3 isoform...   277   2e-74
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]      222   6e-58
gi|4504425 high-mobility group box 1 [Homo sapiens]                    80   3e-15
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]           80   3e-15
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]           80   3e-15
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]           80   3e-15
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     79   1e-14
gi|194688135 high-mobility group box 2 [Homo sapiens]                  77   3e-14
gi|194688133 high-mobility group box 2 [Homo sapiens]                  77   3e-14
gi|11321591 high-mobility group box 2 [Homo sapiens]                   77   3e-14
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]             77   3e-14
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]            73   5e-13
gi|71143137 high-mobility group box 3 [Homo sapiens]                   71   2e-12
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...    70   3e-12
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...    70   4e-12
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...    70   4e-12
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...    70   4e-12
gi|83715964 high-mobility group 20B [Homo sapiens]                     68   2e-11
gi|169212060 PREDICTED: high mobility group protein B3-like prot...    66   6e-11
gi|239745831 PREDICTED: high mobility group protein B3-like prot...    66   6e-11
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           66   6e-11
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...    65   1e-10
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...    65   1e-10
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...    65   1e-10

>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score =  936 bits (2419), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
           MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 43  MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 102

Query: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
           GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 103 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 162

Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
           MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 163 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 222

Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
           RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 223 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 282

Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
           MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 283 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342

Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
           KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 343 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 402

Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
           HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 403 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 462

Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
           SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 463 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506


>gi|149408141 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score =  936 bits (2419), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
           MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60

Query: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
           GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120

Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
           MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180

Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
           RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240

Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
           MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300

Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
           KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360

Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
           HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420

Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
           SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464


>gi|14249636 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score =  936 bits (2419), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
           MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60

Query: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
           GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120

Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
           MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180

Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
           RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240

Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
           MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300

Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
           KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360

Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
           HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420

Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
           SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464


>gi|149408146 TOX high mobility group box family member 2 isoform b
           [Homo sapiens]
          Length = 488

 Score =  872 bits (2253), Expect = 0.0
 Identities = 437/464 (94%), Positives = 437/464 (94%), Gaps = 27/464 (5%)

Query: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
           MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 52  MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 111

Query: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
           GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 112 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 171

Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
           MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 172 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 231

Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
           RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 232 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 291

Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
           MWDSLGEEQKQ                           SSPDQGETKSTQANPPAKMLPP
Sbjct: 292 MWDSLGEEQKQ---------------------------SSPDQGETKSTQANPPAKMLPP 324

Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
           KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 325 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 384

Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
           HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 385 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 444

Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
           SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 445 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score =  369 bits (948), Expect = e-102
 Identities = 228/501 (45%), Positives = 300/501 (59%), Gaps = 55/501 (10%)

Query: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
           M++ + + +  SQ+Y G S  +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH +  N
Sbjct: 44  MTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHN 103

Query: 61  GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------G 110
           GLLP +  Q MDLP I VSNML QD  LLS  +  + ++ + E   Y S          G
Sbjct: 104 GLLPFHP-QNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRG 162

Query: 111 RPGPLLGRPAMLA-SHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQ 166
           +P  +  +P M+    ++ ++QSQL +Q+G+    S++ H+SPSPPGSKSATPSPSSS  
Sbjct: 163 QPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVH 222

Query: 167 EEESEVHFKISG-EKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 225
           E+E +   KI+G EKRP++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ
Sbjct: 223 EDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 282

Query: 226 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGE 285
           NP+ATFG+VSKIVASMWD LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS  +  +
Sbjct: 283 NPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVD 342

Query: 286 TKSTQANPPAKMLPPKQPMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSK 338
            K++Q   P +++  K  ++  P  A S L  S     + G +P       SL R +  K
Sbjct: 343 VKTSQ---PPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPK 399

Query: 339 S--------LLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAP 385
                     +  ++ SPPPP    +SP LHQ L++  H    +  P     P+ +  A 
Sbjct: 400 PNNQMPVTVSIANMAVSPPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSAL 457

Query: 386 QPPVLPTPMALQ--VQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYP 443
             P +     LQ   Q  ++P+    Q      E+  S   C   P  P    DW++ Y 
Sbjct: 458 HSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYC 512

Query: 444 SGECGISTCSLLPRDKSLYLT 464
           S          + RDK+LYLT
Sbjct: 513 SS-------GGMQRDKALYLT 526


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score =  280 bits (717), Expect = 2e-75
 Identities = 188/428 (43%), Positives = 250/428 (58%), Gaps = 48/428 (11%)

Query: 1   MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
           M++ N    + S+T++  S  +E++EIPPITPP   +P+L  + D    + +L   L   
Sbjct: 35  MAEANNAFFAASETFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQ 93

Query: 61  G--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY---------- 107
           G    P +  Q++DLP+I +S N++ QD  L S  L   Q   H++V+ Y          
Sbjct: 94  GSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMRS 151

Query: 108 -----DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATP 159
                D+ R G       M  + ++ ++QSQL +Q+G+    +S+ H+SPSPP SKSATP
Sbjct: 152 IVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATP 205

Query: 160 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQ 219
           SPSSS  EE+++   +  GEKR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQ
Sbjct: 206 SPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQ 265

Query: 220 AAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKS 279
           AAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAYRASLVSK+
Sbjct: 266 AAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKA 325

Query: 280 SPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGASPASLARTLG 336
           + +  E         A+ +   Q   A   L S L   TP   Q     ASP +L ++L 
Sbjct: 326 AAESAE---------AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSASPQTLQQSL- 374

Query: 337 SKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPAPQPPVLPTPM 394
            +S+ P       P      S T+    ++P +    L+S      +  AP   V P+  
Sbjct: 375 PRSIAPKPLTMRLPMNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQ 432

Query: 395 ALQVQLAM 402
             Q Q+ +
Sbjct: 433 TQQHQMQL 440


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score =  277 bits (708), Expect = 2e-74
 Identities = 189/429 (44%), Positives = 250/429 (58%), Gaps = 49/429 (11%)

Query: 1   MSDGNPELLSTS-QTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTP 59
           M++ N    + S QT++  S  +E++EIPPITPP   +P+L  + D    + +L   L  
Sbjct: 39  MAEANNAFFAASEQTFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPS 97

Query: 60  NG--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY--------- 107
            G    P +  Q++DLP+I +S N++ QD  L S  L   Q   H++V+ Y         
Sbjct: 98  QGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMR 155

Query: 108 ------DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSAT 158
                 D+ R G       M  + ++ ++QSQL +Q+G+    +S+ H+SPSPP SKSAT
Sbjct: 156 SIVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSAT 209

Query: 159 PSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDT 218
           PSPSSS  EE+++   +  GEKR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDT
Sbjct: 210 PSPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDT 269

Query: 219 QAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSK 278
           QAAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAYRASLVSK
Sbjct: 270 QAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSK 329

Query: 279 SSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGASPASLARTL 335
           ++ +  E         A+ +   Q   A   L S L   TP   Q     ASP +L ++L
Sbjct: 330 AAAESAE---------AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSASPQTLQQSL 379

Query: 336 GSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPAPQPPVLPTP 393
             +S+ P       P      S T+    ++P +    L+S      +  AP   V P+ 
Sbjct: 380 -PRSIAPKPLTMRLPMNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSAPSTQVSPSV 436

Query: 394 MALQVQLAM 402
              Q Q+ +
Sbjct: 437 QTQQHQMQL 445


>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
          Length = 621

 Score =  222 bits (565), Expect = 6e-58
 Identities = 168/464 (36%), Positives = 229/464 (49%), Gaps = 50/464 (10%)

Query: 9   LSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCH-GLTPNGLLPA-Y 66
           LS ++T++  S  +E++EIPPI+  + P    L + D    +  L     + +G   A Y
Sbjct: 21  LSGAETFHTPSLGDEEFEIPPISLDSDPS---LAVSDVVGHFDDLADPSSSQDGSFSAQY 77

Query: 67  SYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPG----PLLGRPAML 122
             Q +D+P  M   ++ Q   LLSG L    ++ HS    Y +  P     P+    + L
Sbjct: 78  GVQTLDMPVGMTHGLMEQGGGLLSGGLT--MDLDHSIGTQYSANPPVTIDVPMTDMTSGL 135

Query: 123 ASH--MSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESE-VHFKI 176
             H  ++ + QS+L SQ+G+     +I   + SP    S TPSP+SS  E+  E    ++
Sbjct: 136 MGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEDFRRQL 195

Query: 177 SGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSK 236
             +K    + GKK K PKK+KKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+VSK
Sbjct: 196 PSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSK 255

Query: 237 IVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR-----ASLVSKSSPDQGETKSTQA 291
           IVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAY+      + V     D      T +
Sbjct: 256 IVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPS 315

Query: 292 NPPAKMLPPKQPMYAM---PGLA-SFLTPSDL------QAFRSGASPASLARTLGSKSLL 341
            PP   + P  P  A    P L+ S +  S L      QA        ++ + + +K +L
Sbjct: 316 PPPMATVDPASPAPASIEPPALSPSIVVNSTLSSYVANQASSGAGGQPNITKLIITKQML 375

Query: 342 PG------------LSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPV 389
           P             + A+        L  T     ++ P  Q  +++  V  + A     
Sbjct: 376 PSSITMSQGGMVTVIPATVVTSRGLQLGQT--STATIQPSQQAQIVTRSVLQAAAAAAAA 433

Query: 390 ----LPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGP 429
               LP P      L   P PP  Q    + + P       P P
Sbjct: 434 ASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPP 477



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 62/195 (31%)

Query: 311 ASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQ--LSLPP 368
           A  +T S LQA  + A+ AS+         LP     PPP    P  PT  Q   L  PP
Sbjct: 416 AQIVTRSVLQAAAAAAAAASMQ--------LPPPRLQPPPLQQMPQPPTQQQVTILQQPP 467

Query: 369 HAQGALLSPP--VSMSPAPQPPVL-----PTPMALQVQLAMSP-----SPPGPQDFP--- 413
             Q     PP  V ++   QPP L     P P  L++Q  + P     SP  P +     
Sbjct: 468 PLQAMQQPPPQKVRINLQQQPPPLQIKSVPLP-TLKMQTTLVPPTVESSPERPMNNSPEA 526

Query: 414 HISEFPSSSGSC----------------------------SPGP--------SNPTSSGD 437
           H  E PS    C                            SP P        + P  S D
Sbjct: 527 HTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKD 586

Query: 438 WDSSYPSGECGISTC 452
           WD+ Y S EC +  C
Sbjct: 587 WDNEYCSNECVVKHC 601


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K   KKK KDPN P++P SA+ LF  + +  IKG++P  + GDV+K +  MW++   + K
Sbjct: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141

Query: 251 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
           Q Y++K    K++Y K +AAYRA    K  PD  +    +A    K
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRA----KGKPDAAKKGVVKAEKSKK 183



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +P+  +S+YA F +  +   K ++P A+  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
             +A K  Y + +  Y         P +GETK    +P A    PK+P  A     S   
Sbjct: 63  MAKADKARYEREMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYR 110

Query: 316 PSDLQAFRSGASPASLARTLG 336
           P  ++    G S   +A+ LG
Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K   KKK KDPN P++P SA+ L+F +    IKG+ P  +FGDV+K +  MW++   + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277

Query: 251 QAYKRKTEAAKKEYLKALAAYRA 273
           Q Y++++   K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 204 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 263
           P +P  ++       + A      S  F + SK  +  W ++  ++K  + R      ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198

Query: 264 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 323
             KA  A+    +    P +GETK    +P A    PK+P  A     S   P  ++  R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253

Query: 324 SGASPASLARTLG 336
            G S   +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K   KKK KDPN P++P SA+ L+F +    IKG+ P  +FGDV+K +  MW++   + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277

Query: 251 QAYKRKTEAAKKEYLKALAAYRA 273
           Q Y++++   K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 204 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 263
           P +P  ++       + A      S  F + SK  +  W ++  ++K  + R      ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198

Query: 264 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 323
             KA  A+    +    P +GETK    +P A    PK+P  A     S   P  ++  R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253

Query: 324 SGASPASLARTLG 336
            G S   +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K   KKK KDPN P++P SA+ L+F +    IKG+ P  +FGDV+K +  MW++   + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277

Query: 251 QAYKRKTEAAKKEYLKALAAYRA 273
           Q Y++++   K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 204 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 263
           P +P  ++       + A      S  F + SK  +  W ++  ++K  + R      ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198

Query: 264 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 323
             KA  A+    +    P +GETK    +P A    PK+P  A     S   P  ++  R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253

Query: 324 SGASPASLARTLG 336
            G S   +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 11/135 (8%)

Query: 160 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK-------KDPNEPQKPVSAYA 212
           S SSS+ E +S+   K    KR      K AK+ K +KK       KDPN P++P+SAY 
Sbjct: 500 SASSSSNEGDSDRDEK----KRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYM 555

Query: 213 LFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR 272
           L+   ++  IK  +P  +  D+SK    +W  + +E+K+ + RK E A+++Y KA+  Y 
Sbjct: 556 LWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615

Query: 273 ASLVSKSSPDQGETK 287
                 S  D+ + K
Sbjct: 616 GGRGESSKRDKSKKK 630


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K  KK KKKDPN P++P SA+ LF  + +  IK ++P  + GD +K +  MW     + K
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 251 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 294
           Q Y++K    K++Y K +AAYRA   S   K  P +  T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DPN+P+  +S+YA F +  +   K ++P  S  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
             ++ K  Y + +  Y         P +G+ K  + +P A   PP
Sbjct: 63  MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K  KK KKKDPN P++P SA+ LF  + +  IK ++P  + GD +K +  MW     + K
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 251 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 294
           Q Y++K    K++Y K +AAYRA   S   K  P +  T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DPN+P+  +S+YA F +  +   K ++P  S  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
             ++ K  Y + +  Y         P +G+ K  + +P A   PP
Sbjct: 63  MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K  KK KKKDPN P++P SA+ LF  + +  IK ++P  + GD +K +  MW     + K
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 251 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 294
           Q Y++K    K++Y K +AAYRA   S   K  P +  T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DPN+P+  +S+YA F +  +   K ++P  S  F + SK  +  W ++  ++K  ++ 
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
             ++ K  Y + +  Y         P +G+ K  + +P A   PP
Sbjct: 63  MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K  KKKK KDPN P++P  A+ LF  + +  IKG++P  +  DV K +A MW++     K
Sbjct: 756 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADK 815

Query: 251 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
           Q Y++K    K++Y K +AAYRA    K  P+  + +  +A    K
Sbjct: 816 QFYEKKAAKLKEKYKKDIAAYRA----KGKPNSAKKRVVKAEKSKK 857


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
           K   KKK KDPN P++P SA+ LF  +    IKG++P  + GDV+K +  MW++   + K
Sbjct: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141

Query: 251 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
           Q  ++K    K++Y K +AAY+A    K  P+  +    +A    K
Sbjct: 142 QPGEKKAAKLKEKYEKDIAAYQA----KGKPEAAKKGVVKAEKSKK 183



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 15/141 (10%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +P+  +S+YA F +  +   K ++  A+  F + S   +  W ++  ++K  ++ 
Sbjct: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
             +A K  Y + +  Y         P +GETK    +P A    PK+P  A     S   
Sbjct: 63  MAKADKTHYERQMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYH 110

Query: 316 PSDLQAFRSGASPASLARTLG 336
           P  ++    G S   +A+ LG
Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 196 KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKR 255
           KKKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y  
Sbjct: 85  KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144

Query: 256 KTEAAKKEYLKALAAYRA 273
           K    K++Y K +A Y++
Sbjct: 145 KAAKLKEKYEKDVADYKS 162



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 12/105 (11%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +P+  +SAYA F +  +   K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
             +A K  Y + +  Y         P +G  K    N P +  PP
Sbjct: 63  MAKADKVRYDREMKDY--------GPAKGGKKKKDPNAPKR--PP 97


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 150 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 207
           SP  SK  +    + + +E+S+       +K       ++ K P K  KKKKDP+ P++P
Sbjct: 17  SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73

Query: 208 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKA 267
            S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y  KT   K++Y K 
Sbjct: 74  PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKD 133

Query: 268 LA 269
           +A
Sbjct: 134 VA 135


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 188 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 245
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129

Query: 246 GEEQKQAYKRKTEAAKKEYLKALA 269
            + +KQ Y  KT   K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 257
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 258 EAAK 261
           +  K
Sbjct: 62  KTDK 65


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 188 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 245
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129

Query: 246 GEEQKQAYKRKTEAAKKEYLKALA 269
            + +KQ Y  KT   K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 257
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 258 EAAK 261
           +  K
Sbjct: 62  KTDK 65


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 188 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 245
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129

Query: 246 GEEQKQAYKRKTEAAKKEYLKALA 269
            + +KQ Y  KT   K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 257
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 258 EAAK 261
           +  K
Sbjct: 62  KTDK 65


>gi|83715964 high-mobility group 20B [Homo sapiens]
          Length = 317

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 149 PSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSA--------DPGKKAKNPKKKKKKD 200
           P  PG+ +A     +  Q     V  K    + P A        +P KK   PK KK+K 
Sbjct: 5   PKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGKKRKK 64

Query: 201 --PNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 258
             PN P+ PV+ Y  F  + +  I+ ++P   F +++K++ + W  L   +KQ Y  + E
Sbjct: 65  ILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAE 124

Query: 259 AAKKEYLKALAAYRASLVSKSSPDQGETK 287
             K++Y+K L AY+ S   K   ++ + K
Sbjct: 125 REKQQYMKELRAYQQSEAYKMCTEKIQEK 153


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 154 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 213
           SK  +    + +++E+S+ +     +K       K     K  KKKDPN P++P S + L
Sbjct: 42  SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101

Query: 214 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 273
           F  +     K  NP    GDV+K +  MW +L + +KQ Y  +    K++Y K +A Y++
Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161

Query: 274 SLVSKSSPDQGETKSTQ 290
               KS   +G  K  Q
Sbjct: 162 K--GKSDGAKGPAKVAQ 176



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +P+  +SAYA F +  +   K +NP     F + SK  +  W ++ +++K  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
             +A K  Y + +  Y         P +G  K    +P A   PP
Sbjct: 63  LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 154 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 213
           SK  +    + +++E+S+ +     +K       K     K  KKKDPN P++P S + L
Sbjct: 42  SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101

Query: 214 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 273
           F  +     K  NP    GDV+K +  MW +L + +KQ Y  +    K++Y K +A Y++
Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161

Query: 274 SLVSKSSPDQGETKSTQ 290
               KS   +G  K  Q
Sbjct: 162 K--GKSDGAKGPAKVAQ 176



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +P+  +SAYA F +  +   K +NP     F + SK  +  W ++ +++K  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
             +A K  Y + +  Y         P +G  K    +P A   PP
Sbjct: 63  LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 109/406 (26%), Positives = 155/406 (38%), Gaps = 45/406 (11%)

Query: 45  DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEV 104
           D   S HS    L  NG+  ++  +   L   +  N  + D HL      +    + S  
Sbjct: 79  DSSGSGHSAFEPLVANGVPASFVPKPGSLKRGL--NSQSSDDHL---NKRSRSSSMSSLT 133

Query: 105 AAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS-PSS 163
            AY SG P     R A+ +S+ S    SQL  + G  SS      SP  S+S TP  P+ 
Sbjct: 134 GAYASGIPSS--SRNAITSSYSSTRGISQLWKRNGPSSS---PFSSPASSRSQTPERPAK 188

Query: 164 STQEEESEVHFKISGEKRPSA----DPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQ 219
             +EEE   H   S    P A      G+KA +   +KK++ N    P S+     R  Q
Sbjct: 189 KIREEELCHH---SSSSTPLAADRESQGEKAADTTPRKKQNSNSQSTPGSS-GQRKRKVQ 244

Query: 220 AAIKGQNPSATFGDVSKIVASMW-DSLGEEQK-------QAYKRKTEAAKKEYLKALAAY 271
                +    T     ++  S+  + L  E+K       QA + K++AA     +     
Sbjct: 245 LLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPIT 304

Query: 272 RASLVSKSSPDQGETKSTQANPPAKMLPPK-QPMYAMPGLASFLTPSDLQAFRSGASPAS 330
           + S             +  A+PP  +L P   P+  +  L    TP  L      A  A+
Sbjct: 305 QPSFTFTLPA------AAPASPPTSLLAPSTNPL--LESLKKMQTPPSLPPCPESAGAAT 356

Query: 331 LARTLGSK--SLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ-- 386
                  K  SLLP L  S   PP    SP+     S PP     L+  P SM PA    
Sbjct: 357 TEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFD---SKPPTTLLGLIPAP-SMVPATDTK 412

Query: 387 -PPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSN 431
            PP L    A + Q   +PSP   Q F   ++  S S   +P  S+
Sbjct: 413 APPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASS 458


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 194 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 253
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141

Query: 254 KRKTEAAKKEYLK 266
             K    K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154



 Score = 34.3 bits (77), Expect = 0.25
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107

Query: 316 PSDLQAFRSGASPASLARTLG 336
           P  +++   G S   +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 194 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 253
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141

Query: 254 KRKTEAAKKEYLK 266
             K    K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154



 Score = 34.3 bits (77), Expect = 0.25
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107

Query: 316 PSDLQAFRSGASPASLARTLG 336
           P  +++   G S   +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 194 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 253
           K  KKKDPN P++P S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y
Sbjct: 82  KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141

Query: 254 KRKTEAAKKEYLK 266
             K    K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154



 Score = 34.3 bits (77), Expect = 0.25
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)

Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
           K DP +PQ  +SAYA   +      K +NP     F + SK  +  W ++  ++K  +  
Sbjct: 3   KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62

Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
             +A +  Y             +   D G  K  +   P     PK+P        S   
Sbjct: 63  MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107

Query: 316 PSDLQAFRSGASPASLARTLG 336
           P  +++   G S   +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.125    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,028,420
Number of Sequences: 37866
Number of extensions: 1529428
Number of successful extensions: 18387
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 1254
Number of HSP's that attempted gapping in prelim test: 10818
Number of HSP's gapped (non-prelim): 5918
length of query: 464
length of database: 18,247,518
effective HSP length: 106
effective length of query: 358
effective length of database: 14,233,722
effective search space: 5095672476
effective search space used: 5095672476
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press