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Search of human proteins with 14210518
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14210518 PAR-6 gamma protein [Homo sapiens]
(376 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14210518 PAR-6 gamma protein [Homo sapiens] 758 0.0
gi|62955042 PAR-6 beta [Homo sapiens] 394 e-110
gi|8394417 par-6 partitioning defective 6 homolog alpha isoform ... 327 1e-89
gi|82659097 par-6 partitioning defective 6 homolog alpha isoform... 325 4e-89
gi|38570142 membrane protein, palmitoylated 5 [Homo sapiens] 57 4e-08
gi|21536464 palmitoylated membrane protein 3 [Homo sapiens] 53 4e-07
gi|45827729 scribble isoform b [Homo sapiens] 51 1e-06
gi|45827731 scribble isoform a [Homo sapiens] 51 1e-06
gi|14780902 membrane protein, palmitoylated 4 [Homo sapiens] 48 1e-05
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi... 48 2e-05
gi|9507165 syntrophin, gamma 2 [Homo sapiens] 48 2e-05
gi|112382257 InaD-like [Homo sapiens] 47 2e-05
gi|10835173 nitric oxide synthase 1, neuronal [Homo sapiens] 46 5e-05
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 46 5e-05
gi|4759306 lin-7 homolog A [Homo sapiens] 46 6e-05
gi|218505835 membrane-associated guanylate kinase-related 3 iso... 46 6e-05
gi|155969695 membrane-associated guanylate kinase-related 3 iso... 46 6e-05
gi|119943106 synapse-associated protein 102 isoform a [Homo sapi... 45 1e-04
gi|186700629 calcium/calmodulin-dependent serine protein kinase ... 45 1e-04
gi|186700627 calcium/calmodulin-dependent serine protein kinase ... 45 1e-04
gi|186972120 calcium/calmodulin-dependent serine protein kinase ... 45 1e-04
gi|218156340 chapsyn-110 isoform 3 [Homo sapiens] 45 1e-04
gi|218156338 chapsyn-110 isoform 1 [Homo sapiens] 45 1e-04
gi|91199538 chapsyn-110 isoform 2 [Homo sapiens] 45 1e-04
gi|4557529 post-synaptic density protein 95 isoform 1 [Homo sapi... 45 1e-04
gi|192447426 post-synaptic density protein 95 isoform 2 [Homo sa... 45 1e-04
gi|11545920 lin-7 homolog B [Homo sapiens] 45 1e-04
gi|111154074 palmitoylated membrane protein 7 [Homo sapiens] 45 1e-04
gi|41281808 harmonin isoform b3 [Homo sapiens] 44 2e-04
gi|71480164 harmonin isoform a [Homo sapiens] 44 2e-04
>gi|14210518 PAR-6 gamma protein [Homo sapiens]
Length = 376
Score = 758 bits (1956), Expect = 0.0
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDV 60
MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDV
Sbjct: 1 MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDV 60
Query: 61 TIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRRALGA 120
TIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRRALGA
Sbjct: 61 TIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRRALGA 120
Query: 121 LRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASV 180
LRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASV
Sbjct: 121 LRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASV 180
Query: 181 RVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANS 240
RVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANS
Sbjct: 181 RVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANS 240
Query: 241 HNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDEDND 300
HNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDEDND
Sbjct: 241 HNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDEDND 300
Query: 301 VVIEGTLEPARPPQTPGAPAGSLSRVNGAGLAQRLQRDLALDGGLQRLLSSLRADPRHSL 360
VVIEGTLEPARPPQTPGAPAGSLSRVNGAGLAQRLQRDLALDGGLQRLLSSLRADPRHSL
Sbjct: 301 VVIEGTLEPARPPQTPGAPAGSLSRVNGAGLAQRLQRDLALDGGLQRLLSSLRADPRHSL 360
Query: 361 ALPPGGVEEHGPAVTL 376
ALPPGGVEEHGPAVTL
Sbjct: 361 ALPPGGVEEHGPAVTL 376
>gi|62955042 PAR-6 beta [Homo sapiens]
Length = 372
Score = 394 bits (1013), Expect = e-110
Identities = 197/297 (66%), Positives = 245/297 (82%), Gaps = 5/297 (1%)
Query: 19 VEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVHGDLLPINNDD 78
+EVKSKFGAEFRRFSL+R KPGKFE+FY L+ H H I N DV +GYAD+HGDLLPINNDD
Sbjct: 17 MEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIHGDLLPINNDD 76
Query: 79 NFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRRAL-GALRDEGPRRRAHLDIGLP 137
N+ KAVS+ANPLLR+FIQK+EEA+ + G +L +++ L LR + R++ H+ I +P
Sbjct: 77 NYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVLRPDNHRKKPHIVISMP 136
Query: 138 RDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISR 197
+DFRPVSSIIDVD++PETHRRVRL+++G EKPLGFYIRDG+SVRVTPHGLEKVPGIFISR
Sbjct: 137 QDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISR 196
Query: 198 MVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVV 257
+VPGGLA+STGLLAVNDEVLEVNGIEV+GK+LDQVTDMMIANS NLI+TV+PANQRNNVV
Sbjct: 197 LVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRNNVV 256
Query: 258 RGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDEDNDVVIEGTLEPARPPQ 314
R R GSSG +D + +G P ++ +F P++ +S+ED D++IE P + P+
Sbjct: 257 RNSRTSGSSGQSTDNS--LLGYPQ-QIEPSFEPEDEDSEED-DIIIEDNGVPQQIPK 309
>gi|8394417 par-6 partitioning defective 6 homolog alpha isoform 1
[Homo sapiens]
Length = 346
Score = 327 bits (837), Expect = 1e-89
Identities = 183/311 (58%), Positives = 218/311 (70%), Gaps = 21/311 (6%)
Query: 17 SAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVHGDLLPINN 76
S VEVKSKF AEFRRF+L R F++F +L+ H I DV +GY D HGDLLP+ N
Sbjct: 14 SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAHGDLLPLTN 73
Query: 77 DDNFCKAVSSANPLLRVFIQKREEAERGSLG--AGSLCRRRRALGALRDEGP-RRRAHLD 133
DD+ +A++S P LR+ +QKR EA+ L + SL RR++ L LR P R R L
Sbjct: 74 DDSLHRALASGPPPLRLLVQKRAEADSSGLAFASNSLQRRKKGL-LLRPVAPLRTRPPLL 132
Query: 134 IGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGI 193
I LP+DFR VSS+IDVDL+PETHRRVRLH+HG ++PLGFYIRDG SVRV P GLE+VPGI
Sbjct: 133 ISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGI 192
Query: 194 FISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQR 253
FISR+V GGLAESTGLLAV+DE+LEVNGIEVAGKTLDQVTDMM+ANSHNLIVTVKPANQR
Sbjct: 193 FISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQR 252
Query: 254 NNVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDED-NDVVIEGTLEPARP 312
NNVVRG +GPPS G P E +SD+D +D+VIE P+
Sbjct: 253 NNVVRGASG-RLTGPPSAGPG---------------PAEPDSDDDSSDLVIENRQPPSSN 296
Query: 313 PQTPGAPAGSL 323
+ G P L
Sbjct: 297 GLSQGPPCWDL 307
>gi|82659097 par-6 partitioning defective 6 homolog alpha isoform 2
[Homo sapiens]
Length = 345
Score = 325 bits (833), Expect = 4e-89
Identities = 182/310 (58%), Positives = 217/310 (70%), Gaps = 20/310 (6%)
Query: 17 SAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVHGDLLPINN 76
S VEVKSKF AEFRRF+L R F++F +L+ H I DV +GY D HGDLLP+ N
Sbjct: 14 SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAHGDLLPLTN 73
Query: 77 DDNFCKAVSSANPLLRVFIQKREEAERG-SLGAGSLCRRRRALGALRDEGP-RRRAHLDI 134
DD+ +A++S P LR+ +QKRE G + + SL RR++ L LR P R R L I
Sbjct: 74 DDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKKGL-LLRPVAPLRTRPPLLI 132
Query: 135 GLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIF 194
LP+DFR VSS+IDVDL+PETHRRVRLH+HG ++PLGFYIRDG SVRV P GLE+VPGIF
Sbjct: 133 SLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIF 192
Query: 195 ISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRN 254
ISR+V GGLAESTGLLAV+DE+LEVNGIEVAGKTLDQVTDMM+ANSHNLIVTVKPANQRN
Sbjct: 193 ISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQRN 252
Query: 255 NVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDED-NDVVIEGTLEPARPP 313
NVVRG +GPPS G P E +SD+D +D+VIE P+
Sbjct: 253 NVVRGASG-RLTGPPSAGPG---------------PAEPDSDDDSSDLVIENRQPPSSNG 296
Query: 314 QTPGAPAGSL 323
+ G P L
Sbjct: 297 LSQGPPCWDL 306
>gi|38570142 membrane protein, palmitoylated 5 [Homo sapiens]
Length = 675
Score = 56.6 bits (135), Expect = 4e-08
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 177 GASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM 236
GA+VR ++ + ISR+V GG AE +GLL DEVLE+NGIE+ GK +++V D++
Sbjct: 268 GATVR------NEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLL 321
Query: 237 IANSHNLIVTVKPANQ 252
L + P+ Q
Sbjct: 322 SDMHGTLTFVLIPSQQ 337
>gi|21536464 palmitoylated membrane protein 3 [Homo sapiens]
Length = 585
Score = 53.1 bits (126), Expect = 4e-07
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 142 PVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPG 201
P+ ID D E+ + VRL ++ ++PLG A++R H + ++R++ G
Sbjct: 121 PLPDNIDEDFDEESVKIVRLVKN--KEPLG------ATIRRDEHS----GAVVVARIMRG 168
Query: 202 GLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGG- 260
G A+ +GL+ V DE+ EVNGI V K D+++ ++ + ++ + + PA Q + ++
Sbjct: 169 GAADRSGLVHVGDELREVNGIAVLHKRPDEISQILAQSQGSITLKIIPATQEEDRLKESK 228
Query: 261 ---RALGSSGPPSD 271
RAL P D
Sbjct: 229 VFMRALFHYNPRED 242
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 51.2 bits (121), Expect = 1e-06
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 153 PETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAV 212
P +RL R G PLG I G+ P G+++ PG+FIS+++P GLA +G L V
Sbjct: 999 PYPVEEIRLPRAG--GPLGLSIVGGSDHSSHPFGVQE-PGVFISKVLPRGLAARSG-LRV 1054
Query: 213 NDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVK----------------PANQRNNV 256
D +L VNG +V T + ++ L + V+ P +
Sbjct: 1055 GDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRDPAPPGLRELCIQKAPGERLGIS 1114
Query: 257 VRGGRALGSSGPPSDGT 273
+RGG A G +G P D T
Sbjct: 1115 IRGG-ARGHAGNPRDPT 1130
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 151 LVPETHRRVRLHRHGC----EKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAES 206
L PE+ +R C E+ LGF I G TP+ GIF+SR+ GG A
Sbjct: 849 LPPESPGPLRQRHVACLARSERGLGFSIAGGKGS--TPYRAGDA-GIFVSRIAEGGAAHR 905
Query: 207 TGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVK 248
G L V D VL +NG++V D ++ A S + + ++
Sbjct: 906 AGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLE 947
Score = 34.7 bits (78), Expect = 0.14
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 143 VSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGG 202
+S ++ D P R + + + E+ LG IR GA GIFIS++ P G
Sbjct: 1085 LSLLVRRDPAPPGLRELCIQKAPGER-LGISIRGGARGHAGNPRDPTDEGIFISKVSPTG 1143
Query: 203 LAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTV 247
A G L V +LEVN + G T + ++ + L V V
Sbjct: 1144 AAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 1188
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 192 GIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAG 226
GIFISR+ G A G+ V D++LEVNG+ + G
Sbjct: 757 GIFISRVSEEGPAARAGV-RVGDKLLEVNGVALQG 790
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 51.2 bits (121), Expect = 1e-06
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 153 PETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAV 212
P +RL R G PLG I G+ P G+++ PG+FIS+++P GLA +G L V
Sbjct: 999 PYPVEEIRLPRAG--GPLGLSIVGGSDHSSHPFGVQE-PGVFISKVLPRGLAARSG-LRV 1054
Query: 213 NDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVK----------------PANQRNNV 256
D +L VNG +V T + ++ L + V+ P +
Sbjct: 1055 GDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRDPAPPGLRELCIQKAPGERLGIS 1114
Query: 257 VRGGRALGSSGPPSDGT 273
+RGG A G +G P D T
Sbjct: 1115 IRGG-ARGHAGNPRDPT 1130
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 151 LVPETHRRVRLHRHGC----EKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAES 206
L PE+ +R C E+ LGF I G TP+ GIF+SR+ GG A
Sbjct: 849 LPPESPGPLRQRHVACLARSERGLGFSIAGGKGS--TPYRAGDA-GIFVSRIAEGGAAHR 905
Query: 207 TGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVK 248
G L V D VL +NG++V D ++ A S + + ++
Sbjct: 906 AGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLE 947
Score = 34.7 bits (78), Expect = 0.14
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 143 VSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGG 202
+S ++ D P R + + + E+ LG IR GA GIFIS++ P G
Sbjct: 1085 LSLLVRRDPAPPGLRELCIQKAPGER-LGISIRGGARGHAGNPRDPTDEGIFISKVSPTG 1143
Query: 203 LAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTV 247
A G L V +LEVN + G T + ++ + L V V
Sbjct: 1144 AAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 1188
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 192 GIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAG 226
GIFISR+ G A G+ V D++LEVNG+ + G
Sbjct: 757 GIFISRVSEEGPAARAGV-RVGDKLLEVNGVALQG 790
>gi|14780902 membrane protein, palmitoylated 4 [Homo sapiens]
Length = 637
Score = 48.1 bits (113), Expect = 1e-05
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 138 RDFRPVSSIIDVDLVPETHRRVRLHRHGC----EKPLGFYIRDGASVRVTPHGLEKVPGI 193
+DF P+ + D +PE+ +R+ C ++PLG I+ E I
Sbjct: 132 KDFEPLLPPLP-DNIPESEEAMRIV---CLVKNQQPLGATIKRH----------EMTGDI 177
Query: 194 FISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPAN 251
++R++ GGLAE +GLL D+++EVNG+ V G +QV ++ + ++ V P +
Sbjct: 178 LVARIIHGGLAERSGLLYAGDKLVEVNGVSVEGLDPEQVIHILAMSRGTIMFKVVPVS 235
>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
sapiens]
Length = 907
Score = 47.8 bits (112), Expect = 2e-05
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 154 ETHRRVRLH--RHGCEKPLGFYIRDGASVRVTPHG-LEKVPGIFISRMVPGGLAESTGLL 210
E RR LH + G EK + + DG S+ +T G E GI+I+ + PG AE +GL
Sbjct: 262 EGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGL- 320
Query: 211 AVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVK 248
V D++LEVNG D+ ++ +S +LI+TVK
Sbjct: 321 KVGDQILEVNGRSFLNILHDEAV-RLLKSSRHLILTVK 357
Score = 41.6 bits (96), Expect = 0.001
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 153 PETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAV 212
P R V L R + LGF IR G+ HG+ GI++S + PG LAE G L V
Sbjct: 135 PGEVRLVSLRRAKAHEGLGFSIRGGSE-----HGV----GIYVSLVEPGSLAEKEG-LRV 184
Query: 213 NDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252
D++L VN +A T + + S L+++V A +
Sbjct: 185 GDQILRVNDKSLARVTHAEAV-KALKGSKKLVLSVYSAGR 223
Score = 32.3 bits (72), Expect = 0.71
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 136 LPRDFRPVSSIIDVD-LVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIF 194
LPR+ RP L+ T VR+ + LG I GA+ R + +P I
Sbjct: 793 LPRNERPTDGANKPPGLLEPTSTLVRVKKSAAT--LGIAIEGGANTR------QPLPRIV 844
Query: 195 ISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGK 227
+ GG A + G L V +LEVNG+ + GK
Sbjct: 845 TIQR--GGSAHNCGQLKVGHVILEVNGLTLRGK 875
>gi|9507165 syntrophin, gamma 2 [Homo sapiens]
Length = 539
Score = 47.8 bits (112), Expect = 2e-05
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 101 AERGSLGAGSL-CRRRRALGALRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETH--- 156
A RG G + R + + L DE + + L ++ + DV V +H
Sbjct: 11 ASRGRQGCLLVPARTKTTIALLYDEESENAYDIRLKLTKEVLTIQKQ-DVVCVGGSHQGR 69
Query: 157 --RRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVND 214
R V L R +P+G G + + VP + IS++ A+ TG+L V D
Sbjct: 70 NRRTVTLRR----QPVG-----GLGLSIKGGSEHNVP-VVISKIFEDQAADQTGMLFVGD 119
Query: 215 EVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTA 274
VL+VNGI V T ++V ++ + +TV+ + ++ LGS GP SD ++
Sbjct: 120 AVLQVNGIHVENATHEEVVHLLRNAGDEVTITVEYLREAPAFLK--LPLGSPGPSSDHSS 177
Query: 275 GFVGP 279
G P
Sbjct: 178 GASSP 182
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 47.4 bits (111), Expect = 2e-05
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 189 KVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM--IANSHNLIVT 246
K G+ + +VPGGLA+ G L D +L++ G V G T +QV ++ NS ++V
Sbjct: 266 KTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVA 325
Query: 247 VKPANQRNNVVRGGRAL-------GSSGPPSDGT 273
PA + AL S GP SD +
Sbjct: 326 RDPAGDISVTPPAPAALPVALPTVASKGPGSDSS 359
Score = 38.1 bits (87), Expect = 0.013
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 18/114 (15%)
Query: 192 GIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPAN 251
GI++ ++PG A G + VND+++ V+G+ + G AN H+++ ++ A
Sbjct: 394 GIYVKSIIPGSAAYHNGHIQVNDKIVAVDGVNIQG----------FAN-HDVVEVLRNAG 442
Query: 252 QRNNVVRGGRALGSS----GPPSD-GTAGFVGPPAPRVLQNFHPDEAESDEDND 300
Q ++ R SS PPSD GT V P P L E E++ D +
Sbjct: 443 QVVHLTLVRRKTSSSTSPLEPPSDRGTV--VEPLKPPALFLTGAVETETNVDGE 494
Score = 38.1 bits (87), Expect = 0.013
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 194 FISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKT 228
+IS +V GG ++ GLL DE+LEVNG+++ GK+
Sbjct: 582 YISSIVSGGPVDTLGLLQPEDELLEVNGMQLYGKS 616
Score = 36.2 bits (82), Expect = 0.049
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 169 PLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKT 228
P+ + G + ++ G G+FIS +V GG A+ G L D++L VNG ++ +
Sbjct: 1533 PVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNAS 1592
Query: 229 LDQVTDMM 236
+ V ++
Sbjct: 1593 QETVATIL 1600
Score = 35.0 bits (79), Expect = 0.11
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTL 229
LG I G +V E++ GIFI +++ A T L D++LEV+G+++ +
Sbjct: 1079 LGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASH 1138
Query: 230 DQVTDMMIANSHNLIVTV 247
+ + I N+ N +V +
Sbjct: 1139 SEAVE-AIKNAGNPVVFI 1155
Score = 31.2 bits (69), Expect = 1.6
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 67 VHGD-LLPINNDDNFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRRALGALRDEG 125
+ GD +L +N +D + + +L+ Q + E G L AGS R + +G
Sbjct: 1575 IQGDQILSVNGEDMRNASQETVATILKC-AQGLVQLEIGRLRAGSWTSARTT--SQNSQG 1631
Query: 126 PRRRAHLD---------------IGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPL 170
++ AH +G R P D+ P T V ++R L
Sbjct: 1632 SQQSAHSSCHPSFAPVITGLQNLVGTKRVSDPSQKNSGTDMEPRT---VEINRE-LSDAL 1687
Query: 171 GFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLD 230
G I G R +P G +P +FI+ + G+A T L V D ++ +NG + G +
Sbjct: 1688 GISIAGG---RGSPLG--DIP-VFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHA 1741
Query: 231 QVTDMMIANSHNLIV 245
V + ++ N++ I+
Sbjct: 1742 DVVN-LLKNAYGRII 1755
>gi|10835173 nitric oxide synthase 1, neuronal [Homo sapiens]
Length = 1434
Score = 46.2 bits (108), Expect = 5e-05
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTL 229
LGF +++ S P + IS ++ GG AE +GL+ D +L VNG + +
Sbjct: 28 LGFLVKERVSK----------PPVIISDLIRGGAAEQSGLIQAGDIILAVNGRPLVDLSY 77
Query: 230 DQVTDMM---IANSHNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQ 286
D +++ + +H +++ P ++ G P + +GPP V
Sbjct: 78 DSALEVLRGIASETHVVLILRGPEGFTTHLET--TFTGDGTPKTIRVTQPLGPPTKAVDL 135
Query: 287 NFHPDEAESDEDNDVVIEGTLEPARPPQ---TPGAPAGSLSRVNG 328
+ P + ++ + ++G P PQ G AGSL NG
Sbjct: 136 SHQP---PAGKEQPLAVDGASGPGNGPQHAYDDGQEAGSLPHANG 177
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 46.2 bits (108), Expect = 5e-05
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 14/162 (8%)
Query: 154 ETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVN 213
E + + L H LGF I G V H GIF+S++V G A G L ++
Sbjct: 243 EETKSLTLVLHRDSGSLGFNIIGGRP-SVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIH 301
Query: 214 DEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVR--GGRALGSSGPPSD 271
D ++EVNG +++ T DQ + ++V V R + L +G +D
Sbjct: 302 DRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQTD 361
Query: 272 GTAGFV------GPPAPRVLQNF-----HPDEAESDEDNDVV 302
T + P+P VL + HP E + ND +
Sbjct: 362 ITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYI 403
Score = 33.5 bits (75), Expect = 0.32
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 192 GIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGK 227
GI+IS + P +A G + D ++++NGIEV +
Sbjct: 446 GIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNR 481
>gi|4759306 lin-7 homolog A [Homo sapiens]
Length = 233
Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 186 GLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIA--NSHNL 243
G E+ I+ISR++PGG+AE G L D++L VNG+ V G+ ++ +++ A +S L
Sbjct: 125 GKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKL 184
Query: 244 IVTVKP 249
+V P
Sbjct: 185 VVRYTP 190
>gi|218505835 membrane-associated guanylate kinase-related 3
isoform 1 [Homo sapiens]
Length = 1481
Score = 45.8 bits (107), Expect = 6e-05
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 193 IFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252
I+I ++P G AE G L DE++ ++GI V GK+ QV D+M + N V +
Sbjct: 750 IYIGAIIPLGAAEKDGRLRAADELMCIDGIPVKGKSHKQVLDLMTTAARNGHVLL----- 804
Query: 253 RNNVVRGGRALGSSGPPSDGTAGFVGPP--APRVLQNFHPDEAESDEDNDVVIE 304
VR G P D + F+ +PR+ + P E DVV++
Sbjct: 805 ---TVRRKIFYGEKQPEDDSSQAFISTQNGSPRLNRAEVPARPAPQEPYDVVLQ 855
Score = 37.4 bits (85), Expect = 0.022
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 186 GLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIV 245
G E G+FI R+ G A G + V D+++E+NG G T + +++ A + +++
Sbjct: 1038 GKEYNMGLFILRLAEDGPAIKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLL 1097
Query: 246 TVKP 249
++P
Sbjct: 1098 LLRP 1101
>gi|155969695 membrane-associated guanylate kinase-related 3
isoform 2 [Homo sapiens]
Length = 1125
Score = 45.8 bits (107), Expect = 6e-05
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 193 IFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252
I+I ++P G AE G L DE++ ++GI V GK+ QV D+M + N V +
Sbjct: 750 IYIGAIIPLGAAEKDGRLRAADELMCIDGIPVKGKSHKQVLDLMTTAARNGHVLL----- 804
Query: 253 RNNVVRGGRALGSSGPPSDGTAGFVGPP--APRVLQNFHPDEAESDEDNDVVIE 304
VR G P D + F+ +PR+ + P E DVV++
Sbjct: 805 ---TVRRKIFYGEKQPEDDSSQAFISTQNGSPRLNRAEVPARPAPQEPYDVVLQ 855
Score = 37.4 bits (85), Expect = 0.022
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 186 GLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIV 245
G E G+FI R+ G A G + V D+++E+NG G T + +++ A + +++
Sbjct: 1038 GKEYNMGLFILRLAEDGPAIKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLL 1097
Query: 246 TVKP 249
++P
Sbjct: 1098 LLRP 1101
>gi|119943106 synapse-associated protein 102 isoform a [Homo
sapiens]
Length = 817
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVA 225
LGF I G PH + PGIFI++++PGG A G L VND VL VN ++V+
Sbjct: 141 LGFSIAGGID---NPH-VPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS 192
Score = 37.0 bits (84), Expect = 0.029
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 33/131 (25%)
Query: 116 RALGALRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIR 175
RA+ AL++ GP R + + R P +I++V+L+ K LGF I
Sbjct: 198 RAVEALKEAGPVVR----LVVRRRQPPPETIMEVNLLKGP------------KGLGFSIA 241
Query: 176 DGASVRVTPHGLEKVPG---IFISRMVPGGLAESTGLLAVNDEVLEVNGI-------EVA 225
G G + +PG I+I++++ GG A+ G L + D +L VN E A
Sbjct: 242 GGI-------GNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEA 294
Query: 226 GKTLDQVTDMM 236
+L +DM+
Sbjct: 295 VASLKNTSDMV 305
Score = 35.4 bits (80), Expect = 0.084
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 186 GLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQ 231
G E GIF+S ++ GG A+ +G L D +L VNG+ + T +Q
Sbjct: 402 GGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQ 447
>gi|186700629 calcium/calmodulin-dependent serine protein kinase
isoform 3 [Homo sapiens]
Length = 897
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 142 PVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPG 201
P S+ D+D+ T R+ + ++P+G ++ + ++ ++R++ G
Sbjct: 467 PESANGDMDMENVTRVRLVQFQKNTDEPMGITLK-----------MNELNHCIVARIMHG 515
Query: 202 GLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM 236
G+ G L V DE+ E+NGI VA +T++Q+ M+
Sbjct: 516 GMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 550
>gi|186700627 calcium/calmodulin-dependent serine protein kinase
isoform 2 [Homo sapiens]
Length = 898
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 142 PVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPG 201
P S+ D+D+ T R+ + ++P+G ++ + ++ ++R++ G
Sbjct: 473 PESANGDMDMENVTRVRLVQFQKNTDEPMGITLK-----------MNELNHCIVARIMHG 521
Query: 202 GLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM 236
G+ G L V DE+ E+NGI VA +T++Q+ M+
Sbjct: 522 GMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 556
>gi|186972120 calcium/calmodulin-dependent serine protein kinase
isoform 1 [Homo sapiens]
Length = 921
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 142 PVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPG 201
P S+ D+D+ T R+ + ++P+G ++ + ++ ++R++ G
Sbjct: 473 PESANGDMDMENVTRVRLVQFQKNTDEPMGITLK-----------MNELNHCIVARIMHG 521
Query: 202 GLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM 236
G+ G L V DE+ E+NGI VA +T++Q+ M+
Sbjct: 522 GMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 556
>gi|218156340 chapsyn-110 isoform 3 [Homo sapiens]
Length = 749
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVA 225
LGF I G PH + PGIFI++++PGG A G L VND +L VN ++V+
Sbjct: 57 LGFSIAGGTD---NPH-IGDDPGIFITKIIPGGAAAEDGRLRVNDCILRVNEVDVS 108
Score = 38.5 bits (88), Expect = 0.010
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 157 RRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEV 216
R+V LH+ LGF I G E GIF+S ++ GG A+ +G L D++
Sbjct: 317 RKVVLHKGSTG--LGFNIVGG----------EDGEGIFVSFILAGGPADLSGELQRGDQI 364
Query: 217 LEVNGIEVAGKTLDQ 231
L VNGI++ G + +Q
Sbjct: 365 LSVNGIDLRGASHEQ 379
>gi|218156338 chapsyn-110 isoform 1 [Homo sapiens]
Length = 975
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVA 225
LGF I G PH + PGIFI++++PGG A G L VND +L VN ++V+
Sbjct: 213 LGFSIAGGTD---NPH-IGDDPGIFITKIIPGGAAAEDGRLRVNDCILRVNEVDVS 264
Score = 38.5 bits (88), Expect = 0.010
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 157 RRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEV 216
R+V LH+ LGF I G E GIF+S ++ GG A+ +G L D++
Sbjct: 525 RKVVLHKGSTG--LGFNIVGG----------EDGEGIFVSFILAGGPADLSGELQRGDQI 572
Query: 217 LEVNGIEVAGKTLDQ 231
L VNGI++ G + +Q
Sbjct: 573 LSVNGIDLRGASHEQ 587
>gi|91199538 chapsyn-110 isoform 2 [Homo sapiens]
Length = 870
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVA 225
LGF I G PH + PGIFI++++PGG A G L VND +L VN ++V+
Sbjct: 108 LGFSIAGGTD---NPH-IGDDPGIFITKIIPGGAAAEDGRLRVNDCILRVNEVDVS 159
Score = 38.5 bits (88), Expect = 0.010
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 157 RRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEV 216
R+V LH+ LGF I G E GIF+S ++ GG A+ +G L D++
Sbjct: 420 RKVVLHKGSTG--LGFNIVGG----------EDGEGIFVSFILAGGPADLSGELQRGDQI 467
Query: 217 LEVNGIEVAGKTLDQ 231
L VNGI++ G + +Q
Sbjct: 468 LSVNGIDLRGASHEQ 482
>gi|4557529 post-synaptic density protein 95 isoform 1 [Homo
sapiens]
Length = 767
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 137 PRDFRPVSS-IIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFI 195
PR + PV+ ++ + +P RR+ +HR LGF I G E GIFI
Sbjct: 334 PRRYSPVAKDLLGEEDIPREPRRIVIHRGSTG--LGFNIVGG----------EDGEGIFI 381
Query: 196 SRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQ 231
S ++ GG A+ +G L D++L VNG+++ + +Q
Sbjct: 382 SFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ 417
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEV 224
LGF I G PH + P IFI++++PGG A G L VND +L VN ++V
Sbjct: 118 LGFSIAGGTD---NPH-IGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDV 168
>gi|192447426 post-synaptic density protein 95 isoform 2 [Homo
sapiens]
Length = 721
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 137 PRDFRPVSS-IIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFI 195
PR + PV+ ++ + +P RR+ +HR LGF I G E GIFI
Sbjct: 288 PRRYSPVAKDLLGEEDIPREPRRIVIHRGSTG--LGFNIVGG----------EDGEGIFI 335
Query: 196 SRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQ 231
S ++ GG A+ +G L D++L VNG+++ + +Q
Sbjct: 336 SFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ 371
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 170 LGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEV 224
LGF I G PH + P IFI++++PGG A G L VND +L VN ++V
Sbjct: 72 LGFSIAGGTD---NPH-IGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDV 122
>gi|11545920 lin-7 homolog B [Homo sapiens]
Length = 207
Score = 44.7 bits (104), Expect = 1e-04
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 186 GLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIA--NSHNL 243
G E+ I+ISR++PGG+A+ G L D++L VNG+ V G+ ++ +++ A S L
Sbjct: 110 GKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKL 169
Query: 244 IVTVKP 249
+V P
Sbjct: 170 VVRYTP 175
>gi|111154074 palmitoylated membrane protein 7 [Homo sapiens]
Length = 576
Score = 44.7 bits (104), Expect = 1e-04
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 148 DVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAEST 207
D+D ++ + +RL ++ +PLG I+ E+ I ++R++ GG A+ +
Sbjct: 129 DIDDEEDSVKIIRLVKN--REPLGATIKKD----------EQTGAIIVARIMRGGAADRS 176
Query: 208 GLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGGR 261
GL+ V DE+ EVNGI V K +++ ++ + + + P ++ + G+
Sbjct: 177 GLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGSKEETPSKEGK 230
>gi|41281808 harmonin isoform b3 [Homo sapiens]
Length = 899
Score = 44.3 bits (103), Expect = 2e-04
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 138 RDFRPVSSIIDVD-LVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFIS 196
R P+ ++ D L P R+++ R P G G SVR GLE G+FIS
Sbjct: 63 RPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGL----GLSVR---GGLEFGCGLFIS 115
Query: 197 RMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM 236
++ GG A+S G L V DE++ +NG ++ T ++V +++
Sbjct: 116 HLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLI 154
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 191 PGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPA 250
PGIFIS + PG L+ G L + D+++EVNG++ + + + ++ +S +L +++ A
Sbjct: 234 PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVN-VLKSSRSLTISIVAA 291
Query: 251 NQR 253
R
Sbjct: 292 AGR 294
>gi|71480164 harmonin isoform a [Homo sapiens]
Length = 552
Score = 44.3 bits (103), Expect = 2e-04
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 138 RDFRPVSSIIDVD-LVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFIS 196
R P+ ++ D L P R+++ R P G G SVR GLE G+FIS
Sbjct: 63 RPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGL----GLSVR---GGLEFGCGLFIS 115
Query: 197 RMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMM 236
++ GG A+S G L V DE++ +NG ++ T ++V +++
Sbjct: 116 HLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLI 154
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 191 PGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPA 250
PGIFIS + PG L+ G L + D+++EVNG++ + + + ++ +S +L +++ A
Sbjct: 234 PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVN-VLKSSRSLTISIVAA 291
Query: 251 NQR 253
R
Sbjct: 292 AGR 294
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,465,991
Number of Sequences: 37866
Number of extensions: 839012
Number of successful extensions: 3484
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 3079
Number of HSP's gapped (non-prelim): 493
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.