Guide to the Human Genome
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Name: PARD6G Sequence: fasta or formatted (376aa) NCBI GI: 14210518
Description:

PAR-6 gamma protein

Referenced in:

PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         29           1
 C cysteine            1.1          4           1
 D aspartate           6.6         25           2
 E glutamate           5.6         21           2
 F phenylalanine       3.7         14           1
 G glycine             9.8         37           2
 H histidine           4.0         15           2
 I isoleucine          3.7         14           2
 K lysine              3.2         12           1
 L leucine            10.1         38           2
 M methionine          1.1          4           2
 N asparagine          4.3         16           2
 P proline             7.2         27           2
 Q glutamine           2.4          9           1
 R arginine            9.6         36           4
 S serine              6.9         26           2
 T threonine           3.5         13           1
 V valine              8.5         32           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PAR-6 gamma protein 
PARD6B                0.503   PAR-6 beta 
PARD6A                0.412   par-6 partitioning defective 6 homolog alpha isoform ...
PARD6A                0.409   par-6 partitioning defective 6 homolog alpha isoform...
MPP5                  0.044   membrane protein, palmitoylated 5 
MPP3                  0.038   palmitoylated membrane protein 3 
SCRIB                 0.035   scribble isoform b 
SCRIB                 0.035   scribble isoform a 
MPP4                  0.031   membrane protein, palmitoylated 4 
DFNB31                0.031   CASK-interacting protein CIP98 isoform 1 
SNTG2                 0.031   syntrophin, gamma 2 
INADL                 0.030   InaD-like 
NOS1                  0.029   nitric oxide synthase 1, neuronal 
PDZRN3                0.029   PDZ domain containing ring finger 3 
LIN7A                 0.029   lin-7 homolog A 
MAGI3                 0.029   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.029   membrane-associated guanylate kinase-related  3 iso...
DLG3                  0.027   synapse-associated protein 102 isoform a 
CASK                  0.027   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.027   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.027   calcium/calmodulin-dependent serine protein kinase ...
DLG2                  0.027   chapsyn-110 isoform 3 
DLG2                  0.027   chapsyn-110 isoform 1 
DLG2                  0.027   chapsyn-110 isoform 2 
DLG4                  0.027   post-synaptic density protein 95 isoform 1 
DLG4                  0.027   post-synaptic density protein 95 isoform 2 
LIN7B                 0.027   lin-7 homolog B 
MPP7                  0.027   palmitoylated membrane protein 7 
USH1C                 0.026   harmonin isoform b3 
USH1C                 0.026   harmonin isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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